Pseudoduganella armeniaca: C9I28_11860
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Entry
C9I28_11860 CDS
T05378
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
masz01011
]
C9I28_11860
Enzymes [BR:
masz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
C9I28_11860
Peptidoglycan biosynthesis and degradation proteins [BR:
masz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
C9I28_11860
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GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
ASNSD1-SEP
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
AVR96325
UniProt:
A0A2R4C9Q2
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All DBs
Position
complement(2714296..2715672)
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AA seq
458 aa
AA seq
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MRLKYTPLLAALIIAAPAIGQAAESASSAERANLPLIPLSPAVKAPAPELASPSKTVAKA
TASEDAFRETDVWNRIRSGYAIPDLNNSLVAKHASWYAERPEYMARASARASLYLFHVVS
ELEKRNMPTELALLPFVESAFNPTAVSSANAGGMWQFMPGTGRDFNLKQNAFKDDRRSVL
ASTDAALTYLQRLYDMFGDWQLALAAYNWGEGSVQKAIAKNRAAGKPTDFEGLSELMPAE
TRNYVPKLQALKNVVANPARYSQTLPLIQNEPYFTAVDKTSDIDLTVAAQLAELSIDEFK
ALNPQFKRPVITGGEQTQILLPKENAEKFHLNLAQWGRALSTWTTHKVTGARESIASLAS
KFRTTPDVIRQANNIPSRGVLKAGSTILVPKLSTSANVDIPSEIAENATVAIDTTERVKP
RSNYRQAKAGSSNTKSPIKLVKARVARADAGKARRTRN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcaagtacacccccctgctggcggcgctgatcatcgcggctccggcgatcggc
caggcagccgaatccgcgtcctccgcggaacgtgccaacctgccgctgatcccgctgtcc
cccgccgtcaaggctcctgcacccgaactcgcctccccttccaagaccgtcgccaaggcc
accgcctcggaagacgctttccgtgaaaccgacgtctggaaccgcatccgctccggctat
gccattcccgacctgaacaattcgctcgtcgccaagcacgccagctggtatgccgagcgc
ccggaatacatggcacgtgcctcggcgcgtgcctcgctgtacctgttccacgtggtttcg
gaactggaaaagcgcaatatgccgacggaactggccctgctgccgttcgtcgagtccgct
ttcaaccccactgccgtgtcgagcgccaacgcgggcggcatgtggcaattcatgcccggc
accgggcgtgacttcaacctgaagcagaacgcgttcaaggacgaccgccgctccgtgctg
gcctcgacggacgccgccctgacctacctgcagcgcctgtatgacatgttcggcgactgg
cagttggcgctggccgcctacaactggggcgaaggctccgtgcagaaggcgatcgcgaag
aaccgcgccgccggcaagccgaccgatttcgagggtctgtccgagctgatgccggcggaa
acccgcaactacgtgccgaagttgcaggcgttgaagaacgtcgtcgccaacccggcgcgc
tacagccaaacgctgccgctgatccagaacgagccctacttcacggccgtcgacaagacc
agcgacatcgacctgaccgtcgcggcccagctggccgagctgtcgatcgacgagttcaag
gccctgaacccgcagttcaagcgccccgtgatcacgggcggcgaacagacgcaaatcctg
ctgccgaaggaaaacgcggaaaaattccacctgaacctggcccagtggggccgcgcgctg
tcgacctggaccacgcacaaggtgacgggcgcgcgtgaatcgatcgcctcgctggcgtcg
aagttccgcaccacgccggacgtgattcgccaggccaacaatatcccgtcgcgcggtgtc
ctgaaggccggctcgaccatcctggtaccgaagctgtcgaccagcgccaacgtcgacatc
ccgagcgagatcgcggagaacgccacggtcgccatcgacacgacggaacgggtcaagcca
cgcagcaattaccgccaggccaaggccggcagcagcaacacgaagtcgccgatcaagctg
gtcaaggctcgcgtggcacgtgccgacgccggcaaggcgcgccgcacgcgcaactaa
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