Pseudoduganella armeniaca: C9I28_12945
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Entry
C9I28_12945 CDS
T05378
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
masz
Pseudoduganella armeniaca
Pathway
masz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
C9I28_12945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masz03400
]
C9I28_12945
DNA repair and recombination proteins [BR:
masz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
C9I28_12945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AVR96500
UniProt:
A0A2R4CAF3
LinkDB
All DBs
Position
complement(2964507..2965616)
Genome browser
AA seq
369 aa
AA seq
DB search
MARALWKGAISFGLVHIPVELHSAVKSNDLDLTMLDKRDFSPIGYKRYNKTTEKEVGWDN
IIKGYEYQAGEYVVLSDEDLRQANVKATQTIDILAFVDAEDVPLTYYETPYYLAPGRGGD
KVYALLRETLRRAGKIGIATVVIRTKQHLCALVAAEDGIIMNTLRYADEIRDTEGLNLPD
KGTKATGIKEKELEMALSLVEGMSEDWAPEQYHDTYKDDVLALVEKKIKAKQTKTITMPS
KDDEAAPSTNVIDLVALLKQSLGAKPGKGKAAAADEDEEEDEVEADEDTDDDEPPPKARR
PAPRGSASVNARSGSRTGTASKSTATAKAKASPAKAEASKSVAKKAVAKPAAKKSTAKSA
STSTRRRAA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgcgctatggaaaggcgccatcagcttcggcctggtgcacataccggtcgag
ctgcattcggccgtcaagagcaatgacctcgacctgacgatgctcgacaagcgcgacttc
tcgcccatcggctacaagcgctacaacaagacgacggaaaaggaagtcggctgggacaac
atcatcaagggctatgaataccaggccggcgaatacgtggtgctgtccgacgaggacctg
cgccaggccaacgtcaaggccacccagaccatcgacatcctggccttcgtcgatgccgag
gacgtgccgctgacgtattacgaaacgccgtactacctggcgccgggccgcggcggcgac
aaggtctacgcgctgctgcgcgagaccctgcgccgcgccggcaagatcggcatcgccacg
gtggtgatccgcaccaagcagcacctgtgcgcgctggtcgcggccgaagacggcatcatc
atgaacaccctgcgctatgccgacgagattcgcgacacggagggcctgaacctgcccgac
aagggcaccaaggctaccggcatcaaggagaaggaactggagatggcgctgtcgctggtg
gaaggcatgagcgaggactgggcgccggagcagtaccacgacacgtacaaggatgacgtg
ctcgccctggtcgagaagaagatcaaggccaagcagaccaagaccatcaccatgccgtcg
aaggacgacgaggcggcgccgtccaccaacgtgatcgacctggtggcgctgctgaagcag
tcgctgggcgccaagccgggcaagggcaaggcggcggcggccgacgaggatgaggaagaa
gacgaggtcgaagccgacgaggacacggacgacgacgaaccgccgccgaaggcgcgccgg
ccggcgccgcgcggctctgccagcgtgaacgcgcgcagtggcagccgtaccggcacggcc
agcaagagtaccgcgaccgccaaggccaaggccagcccggccaaggcggaggcttcgaag
tcggtggcgaagaaggcggtggcgaagccggcggcgaagaagagcacggccaagtccgcg
agcacgtcgacgcggcgtcgcgcggcttga
DBGET
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