Pseudoduganella armeniaca: C9I28_15325
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Entry
C9I28_15325 CDS
T05378
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masz02000
]
C9I28_15325
Transporters [BR:
masz02000
]
Other transporters
Pores ion channels [TC:
1
]
C9I28_15325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AVR96883
UniProt:
A0A2R4CB98
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All DBs
Position
complement(3523026..3525155)
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AA seq
709 aa
AA seq
DB search
MTQPLPLVRAVGAACLLMAHGAVLAQADAADEMKEVMVTATRTAKAVDKIPGAVSVISQR
ELEAQYLVADDPSAALATYIPGYAPSRQKMSSAGESMRGRTTLILLDGVPQSNPLRAGMR
EGYFADTAIIERIEVINGASAIQGMGATGGIVNYITKTPKTPGTSVTVNARVASQFRHDN
VDWKTGLTVSHKSAEIDLLAYASVQQRGMGYDGRGRLLGIDVVQGDTMDASGGDLFVKLG
RDFGDQRLQLTVNRFQFEGDGDYRNVPAVFAQGIPTSSTEGTPPGMPSRNDVKTATLDYR
HADLFGGALSAQLFSQDFSSLYGATNTATFQDIRYAPIGTFYDQSEIVADKHGAKLTYVR
PDLLLRGLEATAGVDFLRDRSRQQLAGTGRTWVPTLDFKSTAPFLQLEYEVGPVTVRGGV
RHESADLRVASYTTLASYGNRFVQGGARSFSKSVKNLGAVWRFAPQWSAFVSSAEGFGLP
DVGLVLRGVNRPNQSVAQLFNLEPVVTRNNEVGVNWRGALGNVGASMYDSRSKLGTVLRI
NAQGIGVMDRVPTTVRGWEVAGELRASKVLSAFGSYAKTMGKTAATAGAPMDLALGARSQ
APDKLVLGANWQPLAGTQLRLQATRLEDRDINIGRVVGTANLEEHFRGYTLADLAATFDT
RYGKFGLAVENLTDRQYVGYYPQSANYKEATSYFAGRGRTFSASVTRTF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccccttcctctcgtccgcgccgtgggcgccgcctgcctgctgatggcgcat
ggcgccgtgctggcccaggccgacgccgccgacgagatgaaggaagtcatggtcacggcc
acgcgcaccgccaaggccgtggacaagattcccggcgccgtgtccgtcatctcccagcgt
gaactggaagcgcagtacctggttgccgacgacccttccgcggcgctggccacctacatt
cccggctatgcgccgagccggcagaagatgtcgtccgccggcgagtcgatgcgcggccgg
accacgctgatcctgctggacggggtaccgcagtcgaacccgctgcgcgccggcatgcgc
gagggctatttcgccgacacggccatcatcgagcgcatcgaggtgatcaacggcgcctcg
gcgatccagggcatgggcgcgacgggcggcatcgtcaactacattaccaagacgccgaag
acgccgggcaccagcgtcaccgtcaacgcccgcgtggcgtcgcagttccggcacgataac
gtcgattggaagaccggcctgaccgtcagccacaagtcggcggaaatcgacctgctggcc
tatgccagcgtgcagcagcgcggcatgggctacgacggccgtggtcgcctgctgggcatc
gacgtggtgcagggcgacacgatggatgcgtccgggggcgacctgttcgtcaagctgggc
cgcgacttcggcgaccagcgcctgcagctgaccgtcaaccgcttccagttcgaaggcgac
ggcgactaccgcaacgtgccggccgtgttcgcccagggcatcccgaccagctcgaccgaa
ggcacgccgcccggcatgccttcgcgtaatgacgtcaagacggccaccctggactaccgc
cacgccgacctgttcggcggcgcgctgagcgcccaactgttcagccaggacttctcgtcg
ctgtacggcgccaccaacacggccacgttccaggacatccgctacgcgccgatcggcacc
ttctacgaccagtcggaaatcgtggcggacaagcacggcgccaagctgacctacgtgcgc
cccgacctgctgctgcgtggcctggaagcgacggcgggcgtggacttcctgcgcgaccgc
agccgccagcagctggccggcaccggccgcacctgggtgccgaccctggacttcaagtcc
accgcgccgttcctgcaactggaatacgaggtcggtcccgtcaccgtgcgcggtggcgtg
cggcacgagtcggccgacctgcgcgtggccagctacaccacgctggcgtcctatggcaac
cgcttcgtccagggcggcgcacgctcgttctcgaaaagcgtgaaaaacctgggcgccgtg
tggcgcttcgcgccgcagtggtcggccttcgtctccagcgcggaaggcttcggcctgccg
gacgtgggcctggtcctgcgcggcgtgaaccgcccgaaccagtccgtggcccagctgttc
aacctggagcccgtggtcacccgcaacaatgaggtgggcgtcaactggcgcggcgcgctg
ggcaacgtgggcgcctcgatgtacgactcccgttccaagctgggcaccgtgctgcgcatc
aatgcgcaaggcatcggcgtgatggaccgggtgccgaccaccgtgcgcggctgggaggtg
gcgggcgaactgcgcgccagtaaggtgctgtcggccttcggcagctatgcgaaaacgatg
ggcaagacggccgcgacggccggcgcgccgatggacctggcgctgggcgcccgctcgcag
gcgcccgataagctggtgctcggcgccaactggcaaccgctggccggcacccagctgcgc
ctgcaggccacccgcctggaagaccgcgacatcaatatcggccgtgtggtcggtaccgcc
aacctggaggagcacttccgcggctacacgctggccgacctggccgctacgttcgacacc
cgctacggcaagttcggcctggcggtggaaaacctgacggaccgccagtacgtcggctac
tacccgcagtcggccaattacaaggaggcgacgtcgtatttcgccgggcgcggccggacc
ttctcggccagtgtgacgcgcaccttctga
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