Pseudoduganella armeniaca: C9I28_15760
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Entry
C9I28_15760 CDS
T05378
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz00906
Carotenoid biosynthesis
masz01100
Metabolic pathways
masz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
C9I28_15760 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
masz01006
]
C9I28_15760 (hpnD)
Enzymes [BR:
masz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
C9I28_15760 (hpnD)
Prenyltransferases [BR:
masz01006
]
Terpene biosynthesis
Squalene/phytoene synthase
C9I28_15760 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AVR96950
UniProt:
A0A2R4CBT6
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All DBs
Position
3623027..3623860
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AA seq
277 aa
AA seq
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MSPDEYCQQKAAQSGSSFYYSFLFLPPERRRAITALYAFCREVDDTVDETSDESLARIKL
AWWRTEVGAMYEGKPTHPVTKALHPFLDTYTLKQEHLHAIIDGMEMDLNQTRYLDYAGLT
KYCWHVASVVGILSASIFGATRPETLRYAEKLGHAFQLTNIIRDVGEDARKGRIYLPINE
LQQFNVTAADLLNARHTENFSKLMAFQAERAQRAYDEAFALLPKEDRRAQRPGLIMAAIY
RTLLDEIQRDGYHVLTQRISLTPLRKLWLAWKTWVRS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgacgaatactgccagcagaaggccgcccaaagcggctccagtttctattac
agcttcctgttcctgccgcccgaacgccgccgcgcgatcacggcgctgtatgccttctgc
cgcgaagtggacgacaccgtcgacgagaccagcgacgaatcgctggcccgcatcaagctg
gcctggtggcgcacggaagtgggcgccatgtatgaaggcaagccgacccaccccgtcacc
aaggcgctgcatcccttcctcgacacctatacgctgaaacaggaacacctgcacgccatc
atcgacggcatggaaatggacctgaaccagacccgctacctcgattacgccggcctgacc
aaatactgctggcacgtggccagcgtggtcggcatcctgtcggccagcattttcggcgcg
acccggccggaaacgctgcgctatgcggaaaagctgggccatgcgttccagctgacgaac
atcatccgcgacgtcggcgaggatgcgcgcaagggccgcatctacctgccgatcaacgag
ctgcagcagttcaacgtgacggccgccgacctgctcaacgcccgccacacggagaacttc
agcaaattgatggcgttccaggccgagcgcgcccagcgcgcgtacgacgaggccttcgcc
ctgctgcccaaggaagaccggcgcgcccagcgccccggcctgatcatggccgcgatctac
cgcaccctgctggacgaaatccagcgcgacggctaccacgtgctgacccagcgcatctcg
ctgacgccgctgcgcaagctgtggctggcctggaagacgtgggtgcgcagctga
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