Pseudoduganella armeniaca: C9I28_16225
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Entry
C9I28_16225 CDS
T05378
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masz02000
]
C9I28_16225
Transporters [BR:
masz02000
]
Other transporters
Pores ion channels [TC:
1
]
C9I28_16225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AVR99254
UniProt:
A0A2R4CI07
LinkDB
All DBs
Position
3743839..3746784
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AA seq
981 aa
AA seq
DB search
MERKPLSAAVALAMLAFAGAARAQLAAEAEPMQKVEVTGIRASLARSLNVKRNATANVEV
VTAEDVGKMPDKNLADSLQRLPGVAVRTDYDEAEKVSMRGTNPDMSLIIFNGHAVSTADW
YIVDQNSSSRSTSLSLVPSSVLNQAIVYKTAQANIVDGGLAGTINVTTRKPLAQKERLSG
VVSAGVSYADLPGKSAPDANASVNWKNDAGTLGLIVQGFAEKRHIRRDSVSRLAYGASSG
WDVINTGTMQGITDASLAGTGLTAADLNGVRMPGSMSAEFVEGVRDRKGGMFSLQYKPND
RLDVTTTGFYSKMKANNYGRLTSGAMYSMLLGKADPLGGLATNTSVNGRQVFASIRNPVI
VDQTTLYGHPLRVLQSAEIVYPDSTPPQYIGNSEAFYRDGATAESAFLDLDASWRASDDL
RLKLLASTTRGVGKTARDQGTTWARYGTGVAYRLGDVDDAPFVQYFGAGENRPGLNPDGS
GYTMVARTASSTRTVDRESSLQLDAEYRLGWRMLTTFETGLRYADHRRRNNRTAPAFRAP
ALGTAPAGYVSYPSDFGKDLDGKFDNTGFYFTPQALKDYINASIRATTPEFERRVVNEID
MRERQSAFYVMQNFDSGAWSGNVGLRFVRTRVNADIVAPLPAGACLKTEPGQPAVPCPAY
PGAITTAGDGSTYYEGVPFDPKAGVVYLKTPSDRSFDNFLPSLNLRYEPRPDMVARFGAS
RTIGRQNYNVLGSGYGTPGCNASGCTVTGPNPGLKPLTSDNVDLSWSWYFAPRSVLTLDL
FHSSIDGYVKTGTVTQGETVQLVDPRDNTVKTFFVNTSSQQGARIKGIEVAFERPLWGSF
GITSNVSRAKTKVDDGRPMVGASEWAGNLGGYFENERLSARLVWNYRGKYVSSTTAPAPT
ANSQGQSVINGVAMPTAPTIAKGVATLAASVNYTIRPGLVVAVDATNLTNTKRAQYRYSE
AEQQKLDVSGRQVYVNVKYRF
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcaagccgctgtcggcggcggtggcattggccatgctggccttcgcgggcgcg
gcccgcgcgcagctggcagccgaggcggagccgatgcagaaggtggaggtaacgggcatc
cgcgcctcgctggcccgctcgctgaacgtgaagcgcaacgccacggccaacgtggaagtg
gtgacggccgaggacgtgggcaagatgccggacaagaacctggccgattccttgcaacgc
ctgcccggcgtggccgtgcgcaccgactacgacgaggcggaaaaagtgtcgatgcgcggc
accaacccggacatgagcctgatcatcttcaacggccatgccgtcagcacggccgactgg
tacatcgtcgaccagaactcgtcgagccgcagcaccagcctgtccctggtgccgtcctcg
gtgctgaaccaggccatcgtctacaagaccgcgcaggcgaatatcgtcgacggcggcctg
gccggcaccatcaacgtgacgaccaggaagccgctggcgcagaaggaaaggctgtccggc
gtcgtcagcgccggcgttagctacgccgacctgcccggcaagagcgcgccggacgccaac
gccagcgtcaactggaagaacgacgccggcaccctcggcctgatcgtgcagggcttcgcc
gagaagcgccacatccggcgcgattccgtgtcgcggctcgcctatggcgcatcgagcggc
tgggacgtcatcaacaccggcacgatgcagggcatcaccgacgcgtcgctggccggcacc
ggcctgacggccgccgacttgaacggcgtgcgcatgcccggctcgatgagcgccgagttc
gtcgagggggtgcgcgaccgcaagggcggcatgttctcgctgcagtacaagcccaacgac
cggctggacgtaacgaccaccggcttctattcgaagatgaaggcgaataactacggccgc
ctgacgtccggcgccatgtacagcatgctgctgggtaaggccgacccgctgggcggcctg
gcgaccaataccagcgtgaacggccgtcaggtcttcgccagcatccgcaaccccgtcatc
gtcgaccagaccacgctgtacggccatccgctgcgcgtgctgcaaagcgccgaaatcgtc
tacccggacagcacgccgccacaatacatcggcaattcggaagccttctaccgcgacggc
gccacggccgaaagtgcgttcctggacctggacgccagctggcgcgccagcgacgacctg
cgcctgaaactgctggcctcgaccacgcgcggcgtcggcaagacggcgcgcgaccagggc
accacctgggcgcgctacggcaccggcgtggcctaccggctgggtgacgtcgacgacgcg
ccgttcgtccaatacttcggcgccggcgagaatcgacctggcctgaatccggacggcagc
ggctacacgatggtggctcgcaccgcgtcgtccacccgcacggtggaccgcgaaagcagc
ctccaactcgacgccgaataccgcctgggctggcgcatgctgacgacgttcgagacgggg
ctgcgctacgccgaccatcgccgccgcaacaaccgtaccgcgcccgccttccgtgcgccc
gcgctcggcacggcgccggccggctacgtgagctacccgtccgacttcggcaaggacctg
gacggcaaattcgacaacacgggcttctacttcacgccgcaggcactgaaggactatatc
aacgcctcgatccgtgccaccacgcccgaattcgaacgccgcgtcgtcaacgagatcgac
atgcgcgagcggcagtcggcgttctacgtgatgcagaatttcgacagcggggcgtggagc
ggcaacgttggcctgcgcttcgtgcgcacgcgcgtcaacgcggacatcgtcgcgccgctg
ccggccggtgcctgcctgaagacggagccgggccagccggccgtgccctgccccgcctac
ccgggcgccatcacgacggcaggcgacggcagcacctattacgagggcgtgccgttcgat
ccgaaggcaggcgtggtgtatctcaagacccccagcgaccgcagcttcgacaacttcctg
cccagcctgaacctgcgctatgaaccaaggcccgacatggtggcccgcttcggcgccagc
cgcaccatcggccggcagaactacaacgtgctgggctccggctacggcacgcccggctgc
aacgccagcggctgcacggtgacggggccgaatcccggcctgaagccgctgacctccgac
aacgtcgacctgtcctggtcgtggtacttcgcgccccgctcggtgctgacactcgacctg
ttccactcgtccatcgatggttacgtcaagaccggcaccgtcacgcagggcgagacggtg
caattggtggacccgcgcgacaacacggtcaagaccttcttcgtcaacacctcatcgcag
cagggcgcgcgcatcaagggcatcgaagtggcgttcgagcggccgctgtggggcagcttc
ggcatcacctccaacgtcagccgtgccaagacgaaggtggacgacggccggccgatggtg
ggcgcgtcggaatgggccggcaacctgggcggctacttcgagaacgagcgcctgagcgcg
cgactggtgtggaactaccggggcaaatacgtcagcagcaccaccgcgcccgccccgacc
gccaacagccagggccagagcgtcatcaacggcgtggcgatgccgacggcgccgacgatc
gccaagggcgtggccacgctggccgcctccgtcaactacacgatccggcccgggctggtg
gtcgccgtcgatgccaccaacctgaccaacaccaagcgcgcgcagtaccgctacagcgag
gcggagcagcagaagctggacgtgtcggggcggcaggtgtatgtcaacgtcaagtaccgc
ttctga
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