Pseudoduganella armeniaca: C9I28_17665
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Entry
C9I28_17665 CDS
T05378
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
masz02044
]
C9I28_17665
02035 Bacterial motility proteins [BR:
masz02035
]
C9I28_17665
Secretion system [BR:
masz02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
C9I28_17665
Bacterial motility proteins [BR:
masz02035
]
Pilus system
Pilus assembly proteins
C9I28_17665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
AVR97265
UniProt:
A0A2R4CCD8
LinkDB
All DBs
Position
complement(4064888..4069570)
Genome browser
AA seq
1560 aa
AA seq
DB search
MKAILSILLALCAALPAFAAQTQIAQVPLLNISGTGTVKPNLMLLFDNSGSMEQTYTPDY
VNDNLCRTSARLANGVTSCTIGHPPFMSPDFNKQYYNPQIRYQPPVKADGTYYPEQTAAA
TSNWTNVASDGFGKQNVNLYGSADTAIDLTTQFPDLRWCDPNNTSDCKVNSATYTYPDNT
YTSASAISTGPYYYTIGVAEYCTDATLKTCVSTSAGAAAPSGYPVPAVVRWCDTRNLTNC
QAKRVGSFLYPRYSQALGAAVAYGTVTIGASRTSNALTINSIVVHDPAGNRTVTNGAVSA
PNGTNTALKQQTLASALASSIMARTGTTYPYLACVKNPIGVANVPACSTFGINLASDSVL
AILPVSCSGSKSVATCQPYYDNSYSGWGITVDAGSTRVGAPTGLLRISGTTANNKQATLG
SVALAGSNLFTNLALGSNSGNVSATAAATAIVSRIGTSGTVRAYPGGNAITPTCADAADA
ATVCLVDTANNAPAKSVTVGSITNRGSLTITPSDTFVDVDTVPTTVQAISSGSAAPSTFA
RVNIVSGRTYPKGAGRTDCAGTTCTYAEEMTNFANWYSYYKSRLQMMKTSVGIAFTRLNG
NYRVGYVRLSSAGAGGAVELKPADFTGGARTSWYSTLYNTTTSGSTPIRTAMDNVGRMYA
NLAPYNYASGQEVVQYPCQQNFLILTTDGYWNGNSTNNVVNNDDRESVTRFCLKKDGCVD
TRSQSQPSISDVALHWYNGGSSTGTVSLRPDLEPSLLKPGLVPAAAGENTHLHMTTYTLG
LGVDGVMNYEPKYDSAPLVNGDFFNLKNGVTSGCPWNGGGAYVWPDPQVTSTASTVQERV
DDLWHAAINGHGKYFSANQPKDVVAGLQEALDKMQISVGAAAAAATSTPNISLEDNDIFS
STFTTVKWFGVLSKRNVDTATGIVDATPVWTSATAMGGQVATTGTAGATTDGRTIWMRDG
ATTDLKPFYFASMSATEKGWFTNKCPLLTQCTLLDSANRTLVNAGTELVNWLRGQQQYAD
DVVFRSYSNSRDADPAATSAVPVVLGDIASSKPAYMRDPRKAYTLAGYETFKSSYATRAP
AVFVAANDGMLHAFNAADGSGGGRELWAYVPRITMQKLPALASTTYGTNHQYTTDGSPEL
ADVQINGQWRTVLVAGLNGGGRGYYALDVTDAGPAWTDATGASRGGQRPKLLWELCADAA
LCPQSRLDANNIGLTFGAPQFGMHNGRWVVYLTSGYNNVPGADNVATGDGKGYLFIVDVA
TGDVLDRVSTNVGDTTTPSGLARITAIANDPAADPVTTYIYGGDNQGNLFRFDLTAGASV
KRIGIAAVGGVPQPITARPDVTLCAVTTTAESGATSQSAQRVVLFGTGRLLDLPDIANTD
VQSLYALRDDGAADLNLRGSTMVAQTLSQRTSTAGTGDDAVTTIDEIDLAGTRVDLSRSS
GWYFDWKLNAGERMNLDPKIVSGVGNVVTNVPTSESSCSVGGTSNFYAVDVCKGTGVNGT
LVGSMLSNTSAAVGFIIVRLPKGDLKLITTTAKGETLTRPLQELDTVGAHRAGWRRVKGD
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccatcctctccatcctgctggcgctgtgcgccgccttgccggcgttcgcggcc
cagacccagatcgcccaggtacctttgctgaacatcagcggcaccggcaccgtcaagccg
aacctgatgctgttgttcgataactccggctcgatggagcagacctacacgccggactac
gtcaacgacaacctgtgccgcacctcggcgcgcctggccaacggcgtcacgtcctgcacg
atcggccatccgccgttcatgagcccggacttcaacaagcagtactacaacccgcagatc
cgctaccagccgccggtcaaggcggacggcacctactatccggagcagaccgccgccgcc
acgtcgaactggaccaacgtcgccagcgacggcttcggcaagcagaacgtcaacctgtac
ggcagcgcggacacggcgatcgacctgaccacacagttccccgacctgcgctggtgcgac
ccgaacaacaccagcgactgcaaggtcaacagcgccacctacacgtatcccgacaacacc
tacacgtccgccagcgccatcagcacgggaccgtactattacaccatcggcgtggccgaa
tactgcacggacgcgacgctgaagacctgcgtctcgaccagtgccggcgccgccgcgccg
tccggctatccggtgccggccgtggtgcgctggtgcgacacgcgcaacctgaccaactgc
caggccaagcgggtgggcagcttcctgtatccgcgctactcgcaggcgctgggcgcggcc
gtggcctacggcaccgtgacgatcggcgccagccgcaccagcaacgcgctgacgatcaac
tcgatcgtcgtccacgaccccgcgggcaaccgcaccgtgaccaatggcgccgtcagcgcg
ccgaacggcaccaacacggcgctgaagcagcagacgctggccagcgcgctggcctcgtcc
atcatggcccggaccggcaccacctatccgtatctcgcgtgcgtgaagaacccgatcggc
gtggccaacgtgccggcctgctcgaccttcggcatcaacctggccagcgacagcgtgctg
gcgatcctgccggtatcgtgcagcggcagcaagagcgtggccacctgccagccatactac
gacaactcgtacagcggctggggcatcacggtggacgcgggcagcacccgggtgggcgcg
ccgaccggcctgctgcgcatcagcggcaccacggccaacaacaagcaggccaccctgggc
agcgtggccctggccggcagcaacctgttcaccaacctggcgctgggcagcaacagcggc
aacgtcagcgccacggcggcggcgaccgcgatcgtcagccgcatcggcacctccggcacc
gtgcgcgcctacccgggcggcaacgccatcacgccgacctgcgcggacgcggccgatgct
gccaccgtctgcctggtggacacggcgaacaacgcgcccgccaagagcgtcacggtcggc
tcgatcacgaaccgcggctcgctgacgatcaccccaagcgacacgttcgtcgacgtcgat
acggtgccgacgacggtgcaggcgatttcgagcggcagcgccgcgcccagcacgttcgcc
cgggtgaacatcgtcagcgggcgcacctacccgaagggcgccggccgcaccgactgcgcc
ggcacgacctgcacctacgcggaggagatgaccaacttcgccaactggtactcgtactat
aaatcgcgcctgcagatgatgaagacctccgtcggcatcgccttcacgcgcctgaacggc
aactaccgcgtgggctacgtgcgcttgtcgagtgccggcgccggcggcgcggtggagttg
aagccggccgacttcacgggtggggcgcgcaccagctggtactcgaccctgtacaacacg
accacgtccggctcgacgccgatccgcacggcgatggacaacgtgggccgcatgtacgcc
aacctggcgccctacaactacgccagcggccaggaggtggtgcagtatccctgccagcag
aacttcctgatcctgacgacggacggctactggaacggcaactcgaccaacaacgtcgtc
aacaacgacgaccgcgaaagcgtcacgcgcttctgcctgaagaaggacggctgcgtcgac
acgcgcagccagagccagccctcgatctccgacgtggcgctgcactggtacaacggcggc
tccagcaccggtaccgtgtcgctgcggccggacctggaaccgagcctgctcaagcccggc
ctggtgccggccgccgccggcgagaacacgcacctgcacatgaccacctacacgctgggc
ctgggcgtggacggcgtgatgaactacgaaccgaagtacgacagcgcgccgctcgtcaac
ggcgacttcttcaacctgaagaacggcgtcaccagcggctgcccgtggaacggcggcggc
gcgtacgtgtggccggacccgcaggtgacgagcaccgcgtccaccgtgcaggaacgggtg
gacgacctgtggcacgcggccatcaatggtcacggcaagtacttcagcgccaaccagccg
aaggacgtggtggccggcctgcaggaagcgctcgacaagatgcagatcagcgtgggcgcg
gccgcggcggccgccacctcgacgcccaatatctcgctggaagacaacgacatcttctcg
tccaccttcaccacggtgaagtggtttggcgtgctgtccaagcgcaacgtcgacacggcc
accggcatcgtcgatgcgacgccggtatggacctcggccacggcgatgggcggccaggtc
gccaccaccggcacggccggcgccaccacggacgggcgcacgatctggatgcgcgacggc
gccaccacggacctgaagccgttctacttcgccagcatgagcgcgacggagaagggctgg
ttcaccaacaaatgcccgctgctgacccagtgcaccttgctcgacagtgccaaccgcacc
ctggtcaatgccggcacggaactggtcaactggctgcgcggccagcaacaatacgccgac
gacgtcgtgttccggtcctacagcaacagccgcgatgccgatcccgccgccaccagcgcg
gtgccggtggtgctgggcgatatcgcctcgtccaagccggcctacatgcgcgatccgcgc
aaggcgtacacgctggccggctacgaaacgttcaagtccagctatgcgacgcgggcgccg
gccgtgttcgtggccgccaacgacggcatgctgcatgccttcaacgcggccgacggcagt
ggcggcggccgcgaactgtgggcctacgtgccgcgcatcacgatgcagaagctgccggcg
ctggcctcgaccacctacggcaccaaccaccagtacaccacggacggctcgccggaactg
gcggacgtgcagatcaacggccagtggcgcacggtcctggtggcgggcctgaacggcggc
gggcgcggctactatgcgctggacgtgacggacgccggcccggcctggaccgacgcgacc
ggcgccagccgcggcggccagcgccccaagctgctgtgggagctgtgcgccgatgcggcg
ctgtgcccgcagagccgcctcgatgccaacaacatcggcctgacgttcggcgcgccgcag
ttcggcatgcacaacggccgctgggtggtctacctgacctcgggctacaacaacgtgccg
ggtgcggacaacgtcgccaccggcgacggcaagggctatctgttcatcgtcgacgtggcg
accggcgacgtgctcgatcgcgtcagcaccaatgtgggcgacacgaccacgccgtccggc
ctggcccgcatcacggcgatcgcgaacgatccggccgccgatccggtcaccacctacatc
tatggcggcgacaaccagggcaacctgttccgcttcgacctgaccgccggcgccagcgtg
aaacggatcggcatcgcggccgtgggcggcgtgccgcagccgatcaccgcgcgcccggac
gtgacgttgtgcgcggtgacgacgacggccgaaagcggcgccacgtcgcagagcgcccag
cgcgtggtgctgttcggtaccggccggctgctggacctgccggacatcgccaacaccgac
gtgcagagcctgtacgcgctgcgcgacgacggcgcggccgacctgaacctgcgcggcagc
acgatggtggcgcagacgctgtcgcagcgcacctcgacggcaggcacgggcgacgatgcc
gtcacgaccatcgacgagatcgacctggcgggcacgcgggtggacctgtcgcgcagcagc
ggctggtatttcgactggaagctcaacgccggcgaacggatgaacctcgacccgaagatc
gtcagcggcgtgggcaacgtggtgaccaacgtgccgacctccgaatcgtcatgctcggtg
ggcggcacgtcgaatttctacgcggtggacgtctgcaagggcacgggcgtgaacggcacg
ctggtgggcagcatgctgtccaatacctcggccgccgtgggcttcatcatcgtccggctg
ccgaagggcgacctgaagctgatcacgacgacggccaagggcgaaaccttgacgcggccg
ttgcaggaactggacacggtgggggcgcaccgggccggctggcgccgggtgaagggcgac
tga
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