KEGG   Pseudoduganella armeniaca: C9I28_18280
Entry
C9I28_18280       CDS       T05378                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
masz  Pseudoduganella armeniaca
Pathway
masz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:masz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    C9I28_18280 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:masz03400]
    C9I28_18280 (recB)
Enzymes [BR:masz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     C9I28_18280 (recB)
DNA repair and recombination proteins [BR:masz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     C9I28_18280 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C UvrD_C_2 AAA_19 PDDEXK_1
Other DBs
NCBI-ProteinID: AVR99286
UniProt: A0A2R4CI76
LinkDB
Position
complement(4194948..4198628)
AA seq 1226 aa
MQGTPLLDALTFPLHGSRLIEASAGTGKTWTIAALYVRLVLGHGGADAFVRPLLPADILV
MTFTRAATRELSNRVRERLVEAAAYFRGQAEAGDPYLDALLDSYPEHSARQQAAHRLMLA
AETMDEAAIFTIDSWCQRMLREHAFDSGNLFDEELVSDEAALFEDAAHDYWRQQVYPLRE
PALGALLACWPDVGRLKASLRDLVKRADGSWHCDGDGQPLPLGALIGAALHELQQRLAAL
KAGWIERIERMEIWLEEKKDAGLLNGRKIQMKWLAGWFGSLRVWVADPARVDPDMAAAGW
HRLSPEGIAEAYEGSDVPAEFAALRQLKDDLAGIEPLAHRLYRHAAAVIAARMEELKRRN
RQFGFADMLLRLQNALEGANGAALRERITQQYPVALVDEFQDTAPSQYRIFDLLYRVADN
DPNLGLFLIGDPKQSIYGFRGADIHSYLAARRATAGRHYQLGTNYRSTREVVEAVNRIFL
HAERLAGDKGFDKGAFRFRSGAVNPLPFDPVDAKGRPERLVGVDGQLQALTVACAEAPDL
RADAYRDFFAHHCAEHIVELLNHPGTGFDGPEGFRRLQPADIAILVRDRKEAKAIRDALR
RRCVPSVYLSDKDSVLDSDEARDVLRWLTALANPLEGGLARAAFATRTANLPLAELARFS
ADELAWEARTEQLKALHAVWQRQGVLAMLRRFIHELGLPAALLAQPGGERRLTNLLHLAE
LLQSASRQLDGEQALIRWMAEQVEGEGDNSDEQVLRLESDAELVKVVTVHKSKGLEYPLV
YLPFAVTARKVERRNRSFFEYTDGDGVRRIDMALSDDAHAAVEAARIEEELRLLYVALTR
ARHFLWLGVAALPAKAKGANVLHESALGYLLTGGAPLPADALQERWQHLRGDCAAIGIAS
AGAPERVTLLARVEHKPPLVEAAPFDARFERDWSVGSFTSLTRGVQVEAAVPVPRDALEA
TLLEGEDGDPAGNATAVQEAPWHRFPRGSVPGNFLHEQLEWLAQEGFDSIHDAGFDARIG
RRIERAGWGHRLEDTIAWLRELVVTPLPPLGAALQDVGMLLPEMEFWFPSERLATGALDA
LCRRHLLDGMARPPLPQRALHGMLKGFSDLVFEHQGRYWVLDYKSNALGARDSAYHAAAL
AHGMAEHRYDVQGAIYLLALHRLLRSRLGAAYDPALHLGGAVFWFLRGVGNAATRGCHLI
GPDEELLDGLDALLHADAPEPMMDEE
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgcaaggcacgccgctgctggacgcgctgacgttcccgctgcacggctcgcgcctgatc
gaggccagcgccggcaccggcaagacctggaccatcgccgcgttgtacgtgcggctggtg
ctgggccatggcggcgccgacgcctttgtccgtccgctgctgccggccgatatcctggtg
atgacgttcacccgcgccgccacgcgcgagctgtccaaccgcgtgcgcgaacggctggtc
gaggcggccgcctacttccgcggccaggccgaggccggcgatccctacctggatgcgttg
ctcgactcgtatcccgagcacagcgcgcgccagcaggccgcgcaccgcctgatgctggcc
gccgagacgatggacgaagcggccatcttcacgatcgactcgtggtgccagcgcatgctg
cgcgagcacgcgttcgacagcggcaacctgttcgacgaggaactggtcagcgacgaggcg
gccctgttcgaggacgcggcgcacgactactggcgccagcaggtctacccgctgcgcgag
ccggcgctgggtgcgctgctggcctgctggccggacgtgggccgcctgaaggccagcctg
cgcgacctggtgaaacgggccgacggcagctggcattgcgacggcgacggccagccgctg
cccctgggcgcgctgatcggcgccgcgctgcacgagctgcagcaacggctggcggcactc
aaggccggctggatcgagcgcatcgaacggatggagatctggctggaggagaagaaggac
gccgggctcctgaacggccgcaagatccagatgaaatggctggccggctggttcggcagc
ctgcgcgtgtgggtggccgacccggcccgggtcgatccggacatggcggccgccggctgg
caccgcctgtcgccggaaggcatcgccgaagcctacgagggcagcgacgtgcccgccgaa
ttcgccgcgctgcgccagctgaaggacgacctggccggcatcgagccgctggcgcaccgg
ctgtaccgccacgccgccgccgtgatcgcggcacgcatggaggaactgaagcgccgcaat
cgccagttcggctttgccgacatgctgctgcgcctccagaatgcgctggagggcgcgaac
ggcgcggcgctgcgcgaacgcatcacgcagcagtacccggtggcgctggtggacgagttc
caggacacggcaccgagccagtaccgcatcttcgacctgctgtaccgggtcgcggacaac
gaccccaacctgggcctgttcctgatcggcgacccgaagcagtcgatctacggtttccgc
ggggcagacatccacagctacctggccgcgcgccgcgccaccgccggccgccactaccag
ctcggcaccaactaccgctccacgcgcgaggtggtggaagcggtcaaccgcatcttcctg
cacgccgagcggctggccggcgacaagggcttcgacaagggcgcgttccgcttccgctcc
ggcgccgtcaatccactgccgttcgatccggtcgatgccaagggccggccggaacggctg
gtcggcgtcgatggccagttgcaggcgctgacggtggcgtgcgcggaggcgcccgacctg
cgtgccgacgcctaccgcgattttttcgcgcaccactgcgccgagcatatcgtcgaactg
ctgaaccatccgggcacgggcttcgacggcccggagggtttccgccgcctgcaaccggcc
gacatcgccatcctggtgcgcgaccgcaaggaagccaaggcgatccgcgatgcgctgcgg
cggcggtgcgtgcccagcgtctacctgtccgacaaggattcggtgctggacagcgacgaa
gcgcgcgacgtgctgcgctggctgaccgccctggccaatccgctcgaaggcggcctggcg
cgggccgccttcgccacgcgcacggccaacctgccgctggccgagctggcgcgtttctcg
gccgacgaactggcgtgggaggcgcgcaccgagcagctgaaggccctgcacgccgtctgg
cagcgccagggcgtgctggcgatgctgcgccgcttcatccacgaactgggcctgccggcc
gcgctgctggcgcagccgggtggcgaacgccggctgaccaacctgctgcacctggccgag
ctgctgcagtcggccagccgccagctcgatggcgagcaggcgctgatccgctggatggcc
gagcaggtcgagggcgagggcgacaacagcgacgaacaggtgctgcggctggaatcggat
gcggagctggtcaaggtcgtcacggtacacaagtcgaagggcctggaatacccgctggtg
tacctgccgttcgccgtcacggcgcgcaaggtcgagcggcgcaaccgcagcttcttcgag
tacaccgatggcgacggcgtgcgccgcatcgacatggcgctgtccgacgacgcccacgcg
gcggtggaagcggcccgcatcgaggaggagctgcgcctcttgtacgtggcgctgacgcgg
gcgcgccacttcctgtggctgggcgtggcggcgctgccggccaaggccaagggcgccaac
gtgctgcacgaatcggcgctgggctacctgctgacgggcggcgcgccgctgccggcggac
gcgctgcaggaacgctggcagcacctgcgcggcgactgcgccgcgatcggcatcgccagc
gccggcgcgcccgagcgcgtcaccctgctggcacgcgtcgagcacaagccgcccctggtc
gaggcggcgccgttcgacgcccgattcgagcgcgactggtcggtcggcagcttcacctcg
ctgacgcgcggcgtgcaggtggaagcagcggtgccggtgccgcgcgacgcgctggaagcg
accctgctggaaggcgaggatggcgacccggccggcaatgccacggcggtgcaggaagcg
ccctggcaccggttcccgcgcggctccgtgcccggcaacttcctgcacgagcagctcgag
tggctggcgcaggaaggcttcgacagcatccacgacgccggcttcgacgcccgcatcggc
cgccgcatcgagcgtgccggctggggccaccggctggaagacaccatcgcctggctgcgc
gagctggtcgtcacgcccttgccgccgctgggtgcggccctgcaggacgtcggcatgctg
ctgcccgaaatggagttctggttccccagcgagcgcctggccaccggtgcgctggacgcg
ctgtgccggcgccacctgctggacggcatggcccgtccgcccttgccgcagcgcgcgctg
cacggcatgctgaagggcttctccgacctggtgttcgaacaccagggccgctattgggtg
ctggactacaaatcgaacgcgctgggcgcgcgcgacagcgcctatcatgcggcggcgctg
gcgcacggcatggccgagcaccgctacgacgtgcagggcgcgatctacctgctggcgctg
caccgcctgctgcgcagccggctgggcgcggcctacgatccggcactgcacctgggcggc
gcggtgttctggttcctgcgcggcgtcggcaacgccgccacgcgcggctgccacctgatc
gggccggatgaagaactgctcgatggcctggacgcgctgctgcacgcggacgcgccggaa
cccatgatggacgaggaatga

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