Pseudoduganella armeniaca: C9I28_18285
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Entry
C9I28_18285 CDS
T05378
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C9I28_18285 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masz03400
]
C9I28_18285 (recC)
Enzymes [BR:
masz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C9I28_18285 (recC)
DNA repair and recombination proteins [BR:
masz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C9I28_18285 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AVR97372
UniProt:
A0A2R4CCT3
LinkDB
All DBs
Position
complement(4198637..4202050)
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AA seq
1137 aa
AA seq
DB search
MTSPIAPGLLILHGNQLEQLRAAVFQWLRGHPLDPLETDILLVQSNGVAEWLKIAMAEEM
GVCAATRVALPARFLWQAYRAMLGRERVPRISAFDKGPLAWRLMRLLPALLADATFAPLR
HFLADGDPERRLQLAERLSDLFDQYQVYRADWLADWAAGRDQMRCPRGVAYPLPEGQRWQ
AALWRAIVASVPEEERALGRASVHTEFVRAVEQGAQPVAPLPRRVVLFGVSALPYQTLQA
LAALARFTQVIVAVPNPCRYYWGDIIDGRDLLRAARRRQQPRNGLDLAAVPLEELHAHSH
PLLASWGRQGRDYIRMLDEFDEASSAAGDGDHLRVDLFSEGDGDTLLRQLQGAVRDLLPL
AEHAFPPPEPDDRSIVFHVAHSVQREVEVLHDQLLTMFGADPTLRPRDVVVMVPDIDVFT
AAIHAVFGQYRRGRTALDARHIPFEIGDVNDRSVNPLLVALEWLLRLPQQRCRQSEVRDL
LDVPAVAARFGLVPDDLPILGQWIEGAGVRWGLDRRHREGLGLGPAGEQNAWIFGIRRML
LGYASGTGAAFGDIEPYGEVGGLDAALAGSLAQLVEQLLGWRAALAQPRTPLEWGEQARA
LLAAFFDAREEADRLTLNQLNDTLNAWLETCEGAGFDEPVPLSVLREAWLGALDEPSLEH
QFVSGGVTFCTLMPMRAVPFRVVCLLGMNDGDFPRRASRLDFDLLALPGMGRPGDRSRRD
DDRYLMLEAVLAARDTLYVSWCGRNVRDNSEQPPSVLVAQLMDYLKAGWQLPDLSERTTE
HALQPFSRRYFEQGGLLTYAGEWRAAHHVDEARAEHGPTLAPFEIDERFRLKLSMLAAFL
RQPVRFFFRQRLGVVFAESALVGEDEEPFGLDGLQRYQLEDALLHDAGEEDEEDADKALA
SLLARAERLQREGVLPIGLIGDKVRDTLVQALLPVRQAWLRLRARYPHPATKLPVGLELD
GVVLEDWIDQLRSDGEQTVWLLQMSSKALDKGGQPRGDKLLGTWLRQLAASAQGAAYTGL
LVARDAVVTMPPLDQDSARTVLAELVTWWRRGMDGPLPVACRTALALVMGGDARTVYDGG
FDLEGEGGDECLARLWPDYAALAAEPDHARVAQALYGPLAQWLKEHVSVQPIDGEDA
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcccatcgcccccggcctcctgatcctgcacggcaaccagctggaacagctg
cgtgccgccgtgttccaatggctgcgcggccacccgctcgacccgctggaaaccgacatc
ctgctggtgcagtcgaacggcgtggccgagtggctgaagatcgccatggccgaggagatg
ggcgtgtgcgccgccacccgggtggcgctgccggcgcgcttcctgtggcaggcctaccgc
gccatgctggggcgcgagcgggtgccgcgcatctccgccttcgacaaggggccgctggcg
tggcgcctgatgcgcctgctgccggcgctgctggccgatgccaccttcgcgccgctgcgc
cacttcctggcggacggcgacccggagcggcgcctgcagctggccgagcggctgtccgac
ctgttcgaccagtaccaggtgtaccgggccgactggctggccgactgggccgccgggcgc
gaccagatgcgctgcccgcgcggcgtcgcctatccgctgcccgagggccagcgctggcag
gccgcgctgtggcgcgccatcgtcgccagcgtgccggaagaagaacgggcgctgggccgc
gccagcgtgcacacggaattcgtgcgcgcggtggagcagggcgcccaaccggtggcgccg
ctgccgcgccgcgtggtgctgttcggcgtctcggccttgccgtaccagaccttgcaggcg
ctggccgcgctggcccgcttcacccaggtcatcgtggccgtgcccaatccctgccgctac
tactggggcgacatcatcgacggccgcgacctgctgcgcgcggcgcgccggcgccagcaa
ccgaggaatggcctggacctggccgccgtgccgctggaggaactgcacgcgcacagccac
ccgctgctggcgagctggggccggcaggggcgcgactacatccgcatgctggacgaattc
gacgaagcatcgagcgccgccggcgatggcgaccacctgcgcgtggacctgttcagcgaa
ggcgacggcgacaccttgctgcgccagttgcagggcgccgtgcgcgacctgctgccgctg
gcggaacacgcgttcccgccgccggagccggatgatcgctcgatcgtgttccacgtcgcc
cacagcgtgcagcgcgaggtggaggtgctgcacgaccagttgctgacgatgttcggggcc
gaccccacgttgcgcccgcgcgacgtggtggtgatggtgccggacatcgacgtcttcacc
gccgccatccacgccgtgttcggccagtaccggcgcggccgcacggcgctggacgcgcgc
cacatcccgttcgagatcggcgacgtcaacgaccgcagcgtcaacccgctgctggtggcg
ctggaatggctgctgcgcctgccgcagcagcgctgccgccagagcgaggtgcgcgacctg
ctggacgtgccggccgtcgccgcgcgcttcggcctggtcccagacgacctgccgatcctg
ggccaatggatcgagggggccggcgtgcgctggggcctggaccggcgtcaccgcgaagga
ctcggcctggggccggcgggcgagcagaacgcctggatcttcggcatccgtcgcatgctg
ctgggctatgccagcggcaccggcgccgccttcggcgacatcgaaccgtatggcgaggtg
ggcggcctggatgcggcgctggccggctcgctggcccagctggtcgagcagttgctgggc
tggcgcgccgcgctggcgcagccgcgcaccccgctcgaatggggcgaacaggcgcgcgcg
ctgctggccgcgttcttcgacgcgcgcgaggaagccgaccgcctgaccctgaaccagctg
aacgacacgctgaacgcctggctggaaacctgcgagggcgccggcttcgacgagccggtg
ccgctgtcggtgctgcgcgaggcctggctgggcgcgctggacgagccgtcgctggagcac
cagttcgtctccggcggcgtcaccttctgcaccctgatgccgatgcgcgcggtgccgttc
cgcgtggtgtgcctgctgggcatgaacgacggcgacttcccgcgccgcgccagccggctg
gacttcgacctgctggcgctgcccggcatgggccgcccaggcgaccgctcgcgccgcgac
gacgaccgctacctgatgctggaagcggtgctggccgcgcgcgacaccttgtatgtcagc
tggtgcggccgcaacgtgcgcgacaacagcgaacagccgccctcggtgctggtggcgcaa
ttgatggactacctgaaggccggctggcagctgccggacttatcggaacgcaccaccgag
cacgcgctgcagccgttctcgcggcgctatttcgagcagggcgggctgctgacgtatgcc
ggcgaatggcgggcggcgcaccacgtcgacgaggccagagctgagcacggcccgaccctg
gcgccgttcgagatcgacgagcgcttccgcctgaagctctccatgctggccgcgttcctg
cgccagccggtgcgtttcttcttccgccagcgcctgggcgtggtgttcgccgaatcggcg
ctggtgggcgaggacgaggaaccgttcggcctggatggcctgcagcgctaccagctggag
gacgcgctgctgcacgatgcgggcgaggaggatgaagaggacgccgacaaagccctggcc
agcctgctggcgcgggccgaacggttgcagcgcgagggcgtgctgcccatcggcctgatc
ggcgacaaggtgcgcgacaccctggtgcaggcgctgctgccggtgcgccaggcctggctg
cggctgcgcgcgcgctatccgcatccggccaccaagctgccggtcggcctggagctggat
ggtgtcgtgctggaggactggatcgaccagctgcgcagcgacggcgaacagaccgtctgg
ctgctgcagatgtcgtcgaaggcactggacaagggcggccagccgcgcggcgacaagctg
ctcggcacctggctgcgccagttggccgccagcgcccagggcgcggcatacaccgggctg
ctggtggcgcgtgacgcggtcgtgacaatgccgccgctggaccaggacagcgcgcgtacc
gtgctggcggagctggtgacgtggtggcgccgcggcatggacggcccgctgccggtggcc
tgccgcaccgcgctggcgctggtcatgggcggcgacgcccgcaccgtgtatgacggcggc
ttcgacctggaaggcgagggcggcgacgaatgcctggcgcgcctgtggccggactacgcc
gcgctggcggccgagcctgaccatgcgcgcgtggcgcaggcgctgtatggcccactggca
cagtggctgaaggagcacgtcagcgtgcagcccatcgacggggaggacgcatga
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