Pseudoduganella armeniaca: C9I28_18565
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Entry
C9I28_18565 CDS
T05378
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
masz
Pseudoduganella armeniaca
Pathway
masz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C9I28_18565 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masz03400
]
C9I28_18565 (uvrA)
DNA repair and recombination proteins [BR:
masz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C9I28_18565 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C9I28_18565 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
AAA_29
DnaJ_CXXCXGXG
AAA_25
AAA_16
AAA_33
RsgA_GTPase
DUF4350
AAA_15
Viral_helicase1
MeaB
Motif
Other DBs
NCBI-ProteinID:
AVR97422
UniProt:
A0A2R4CCY6
LinkDB
All DBs
Position
complement(4262055..4264574)
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AA seq
839 aa
AA seq
DB search
MKQRNLPGMVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYL
ESVSPYARRLFHQMPVPQVDEIDGLPPAVALQQQRGSPTTRSSVGSVTTLSNSLRMLYSR
AGDYPAGQELLYAESFSPNTPEGACPECHGLGRVYEVTEQSMVPDDSLTIRERAVAAWPP
AWHGQNLRDILVTLGYDVDTPWRDLPQKDRDWILYTEETPTVPVYAGLSPQETRQALRRK
DPPSYQGTFTGARKYVLQTFANTESASMKKRVARYMVSNECPVCRGKRLRAESLSVTFAG
HDITAISRLPLARLAQTMRPYAQGSAKVSAKERAAHPEKLIVTQRIAADVLARLDVLLDL
GLGYLTLDRSTPTLSPGELQRLRLATQVRSNLFGVVYVLDEPSAGLHPADTVALLRAMDR
LKASGNSLFVVEHALDVIRHADWIVDVGPAAGEGGGTVLYSGAPDGLRDVAASQTRRYLF
PDSAPPARTAREPAGWLKLAGVTRNNLHQLDAAFPLGVLTTVTGVSGSGKSSLVSQVLVE
LVGRALGHETAAEPEEGEALERAVELPLEGRIVAGLEHVRRMVRVDQKPIGRTPRSNLAT
YTGLFDHVRKLFAATKTAKARRYDAGRFSFNVAKGRCDNCEGEGFVMVELLFLPSVYAPC
PVCAGARYNAKTLEVTYRERNIAEVLGMTVDAAWEFFADEPALHRALDVLREVGLGYLRL
GQPATELSGGEAQRIKLATELQRASRGDTLYVLDEPTTGLHPADVERLIVQLQKLVDAGN
TVVAVEHDMRVVAASDWVVDIGPGAGEEGGTVVAAGPPAQVARSKESRTAPYLRRFLGG
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcgtaacctgcccggcatggtcagggtgcgcggcgcccgcgagcacaacctg
aagaacgtggacgtggacatcccgcgcgacgcgctggtggtgtttaccggcgtatccggc
tccggcaagtcgtcgctggccttcggcaccctgtacgccgaggcgcagcggcgctacctg
gaatcggtgtcgccgtacgcgcgccggctgttccaccagatgccggtgccgcaggtggac
gagatcgacggcctgccacccgccgtggcgctgcagcagcagcgcggctcgcccaccacg
cgttcgtcggtcggcagcgtgaccaccctgtcgaactccctgcgcatgctgtactcgcgc
gccggcgactatccggccgggcaggagctgctgtatgccgaatcgttctcgcccaatacc
cccgaaggggcctgcccggagtgccatggcctgggccgggtgtacgaggtgacggagcag
tcgatggtgccggacgactccttgacgatccgcgaacgcgccgtcgcggcctggccgccg
gcctggcacggccagaacctgcgcgacatcctggtcaccttgggctacgacgtcgacacg
ccgtggcgcgacctgccgcagaaggaccgcgactggatcctgtacacggaagagacgccc
acggtgccggtctacgccggcttgagccctcaggagaccaggcaggccttgaggcgcaag
gacccgcccagctaccagggcacgttcaccggcgcgcgcaagtacgtgttgcagaccttc
gccaacacggaaagcgcgtccatgaagaagcgggtggcgcgctacatggtcagcaacgag
tgccccgtgtgccgcggcaagcggctgcgcgccgagtcgctctccgtgacctttgcgggc
cacgacatcaccgccatctcgcgcctgccgctggcgcgcctggcgcagaccatgcgcccg
tacgcgcaaggcagcgcgaaggtcagcgcgaaggaacgggcggcgcacccggaaaagctg
atcgtcacgcagcgcatcgccgcggacgtgctggcccggctggacgtgctgctcgacctg
ggcctgggctacctgaccctggaccgcagcacgccgaccctgtcgccgggcgagctgcag
cgcctgcgcctggccacgcaggtgcgctcgaacctgttcggcgtcgtctacgtgctggac
gagccgtcggccggcctgcacccggccgacacggtggcgctgctgcgcgcgatggaccgg
ctgaaggcatccggcaactcgctgttcgtggtcgaacacgcgctggacgtgatccgccat
gccgactggatcgtggacgtggggccggcggcgggcgagggcggcggcacggtgctgtac
agcggcgcgccggacggcctgcgcgacgtggcggcgtcgcagacgcggcgctacctgttc
ccggacagcgcgccgccggcacgcacggcgcgcgagccggccggctggctgaagctggcg
ggtgtcacgcgcaacaacctgcaccaactggacgcggcctttccgctcggcgtgctgacc
acggtgacgggcgtctccggatccggcaagtccagcctggtcagccaggtattggtggaa
ctggtcgggcgcgcgctgggccacgagacggccgccgagccggaggagggcgaggcgctg
gagcgggccgtcgagctgccgttggaggggcgcatcgtcgccggcctggaacacgtgcgg
cgcatggtgcgggtggaccagaagccgatcggccgcacgccacgctcgaacctggccacg
tacaccggcctgttcgaccacgtgcgcaagctgttcgccgccaccaagacggccaaggcg
cgccgctacgatgccggccgcttctcgttcaacgtggccaaggggcgctgcgacaattgc
gagggcgaaggcttcgtcatggtggagctgctgttcctgcccagcgtctacgcgccatgc
ccggtctgcgccggcgcccgctacaacgccaagacgctggaggtgacgtaccgcgagcgc
aatatcgccgaggtgctgggcatgacggtggacgcggcctgggagttctttgccgacgag
ccggcgctgcaccgcgcgctggacgtgctgcgcgaggtcgggctgggctacctgcgcctg
ggccagccggccaccgaactgtccggcggcgaggcgcagcgcatcaagctggccaccgaa
ctgcagcgcgcctcgcgcggtgacacgttatatgtgctggacgagccgaccacgggcctg
cacccggcggatgtcgagcggctcatcgtgcagttgcaaaagctggtcgatgccggcaac
acggtggtcgccgtcgaacacgatatgcgcgtggtggcggccagcgactgggtggtcgac
atcggccccggcgcgggcgaggagggtggcacggtggtggcggccggcccgccggcacag
gtggcgcgcagcaaggagagtcgtaccgcgccgtatctgcggcggttccttggcgggtga
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