Pseudoduganella armeniaca: C9I28_19335
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Entry
C9I28_19335 CDS
T05378
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
masz
Pseudoduganella armeniaca
Pathway
masz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C9I28_19335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masz03400
]
C9I28_19335
DNA repair and recombination proteins [BR:
masz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C9I28_19335
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C9I28_19335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AVR99301
UniProt:
A0A2R4CI16
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Position
complement(4452129..4452950)
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AA seq
273 aa
AA seq
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MPYDIVPASPTLVPDDDTAPAVAIPQAPRKRPPPRTVGTRVHGQPAFVLHSYPYKETSLI
VELLTRDFGRVALIAKGAKRPHSQLRGVLQTFQPLSAGWTGKNELRTLTDADWVGGMLPL
EKTALLCGFYLNELLVKLLARDDAHPKLFDHYVATLNQLAHQESPPIVLRKFETALLKET
GVAADLTRCTSTRAKVLAEVQYVVEPERGPRPVQPDDTAPRVAGKTLLDMEREDYRDAAT
QAQSKQLMRFLLAYHLNGAPLNTRQILIDLMQL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtacgacatcgtacccgcgtcgcccaccctcgtgcccgacgacgacacggccccg
gccgtcgctataccccaagctccccgcaagcgcccgccaccgcgcacggtcggcacccgc
gtgcacggtcaaccggccttcgtgctgcacagctacccgtacaaggaaaccagcctcatc
gtcgagttgctgacgcgcgacttcggccgcgtggcgctgatcgccaagggtgccaagcgg
ccccactcgcagctgcgcggcgtgctgcagacgttccagccgctgtccgccggctggacc
ggcaagaacgagctgcgcaccttgaccgacgccgactgggtcggcggcatgctgccgctg
gagaagacggcgctgctgtgcggcttctacctcaatgaattgctggtcaagctgctggca
cgcgacgacgcccatccgaagctgttcgatcactatgtcgccaccttgaaccagctggcg
caccaggaatcgccgcccatcgtcttgcgcaaattcgaaacggccttacttaaggagacg
ggcgtggcggccgacctgacgcgctgcaccagcacccgcgcgaaggtgctggccgaggta
cagtacgtggtggagccggaacgcgggccacggcccgtgcagccggacgacacggcgccg
cgcgtggccggcaagacgctgctcgacatggaacgcgaggactaccgcgacgcggccacg
caggcgcagagcaagcagctgatgcgcttcctgctggcgtatcacctgaacggcgcgccg
ctcaacacgcgccagattctcatcgacttgatgcaactatag
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