Pseudoduganella armeniaca: C9I28_19345
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Entry
C9I28_19345 CDS
T05378
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C9I28_19345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masz03019
]
C9I28_19345
03009 Ribosome biogenesis [BR:
masz03009
]
C9I28_19345
03036 Chromosome and associated proteins [BR:
masz03036
]
C9I28_19345
Enzymes [BR:
masz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
C9I28_19345
Messenger RNA biogenesis [BR:
masz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C9I28_19345
Ribosome biogenesis [BR:
masz03009
]
Eukaryotic type
90S particles
RNase
C9I28_19345
Prokaryotic type
rRNA processing factors
C9I28_19345
Chromosome and associated proteins [BR:
masz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
C9I28_19345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AVR97552
UniProt:
A0A2R4CDB3
LinkDB
All DBs
Position
complement(4453964..4454752)
Genome browser
AA seq
262 aa
AA seq
DB search
MNLQLLQTRLGHTFKDAGLLQQALTHRSHSSLHNERLEFLGDSILNCVVASILYERYHAI
DEGDLSRLRANLVKQQSLYEIAQKLDLSQFLRLGEGELKSGGFRRPSILADTLEALLGAI
FLDAGFDAAATVIRAFYIPILDSVDPRTLGKDAKTLLQEFLQSKKISLPLYNVVATHGAA
HSQEFEIECLVPKLGIQVYGRGGSRRAGEQAAAKLALEVAEQALLKAPPAARKSKPRAAQ
LKLAGIATVQNDQPADPKLANK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacagttattgcagacccggctgggccacacgttcaaggatgccggcttgctt
cagcaggccctgacgcatcgcagccacagcagtctgcataacgaacgcctggaattcctg
ggcgactcgatcctgaactgcgtggtcgcgtcgatcctgtacgagcgttaccatgccatc
gacgagggcgacctgtcgcgcctgcgcgccaacctcgtcaagcagcagtcgctgtacgag
atcgcccaaaagctggacctgtcgcaattcctgcgcctgggcgagggcgaactgaaatcg
gggggcttccgccggccgtcgatcctggccgataccctggaagcgctgctgggcgccatc
ttcctcgatgccggcttcgatgccgccgccaccgtgatccgcgccttctacattccgatc
ctggattcggtcgacccgcgcaccctgggcaaggacgccaagacgctgctgcaggaattc
ctgcagagtaagaaaatctccctgccgctgtacaatgtggtggccacgcacggcgccgcg
cacagccaggagttcgaaatcgaatgcctggtgcccaagctgggcatccaggtctacggc
cggggtggcagccgccgtgccggagagcaggccgcggccaagctggcgctggaggtggcc
gaacaggcgctgctgaaagcgccgccggcggcccgcaaatcgaagccccgcgccgcccag
ctgaagctggcgggcatcgccacggtccagaacgaccagccggcggaccccaagctcgcc
aacaaataa
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