Pseudoduganella armeniaca: C9I28_22230
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Entry
C9I28_22230 CDS
T05378
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz00541
Biosynthesis of various nucleotide sugars
masz01100
Metabolic pathways
masz01250
Biosynthesis of nucleotide sugars
Module
masz_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C9I28_22230
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
masz01005
]
C9I28_22230
Enzymes [BR:
masz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
C9I28_22230
Lipopolysaccharide biosynthesis proteins [BR:
masz01005
]
Lipid A
C9I28_22230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AVR98053
UniProt:
A0A2R4CEK6
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Position
complement(5090119..5090973)
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AA seq
284 aa
AA seq
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MKLCGFDVGLDQPFFLIAGTCVIESRQMAFDVAGAMKEMTAELGIPYIYKSSFDKANRSS
GTSYRGPGMDKGLEILGDVKRELGVPVLTDVHSIEEIEAVASVVDVLQTPAFLCRQTDFI
TACAQSGLPVNIKKGQFLAPHDMKNVIDKARAAAKAKGLNEDNFMACERGASFGYNNLVS
DMRSLAIMRETGAPVVFDATHSVQLPGGNGTSSGGMREMVPVLSRAAVAVGVAGLFMETH
PTPATALSDGPNAVPLGRMKELLSTLIQLDRITKQAGFLENGFE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtgtggattcgatgtcggcctggaccagccgttcttcctgatcgccggcacc
tgcgtgatcgagtcgcgccagatggcgttcgacgtcgccggtgcgatgaaggaaatgacg
gccgaactgggcatcccctacatctataagtcgtcgttcgacaaggccaaccgctcgtcg
ggcacgtcgtaccgcggccccggcatggacaagggcctggaaatcctgggcgacgtcaag
cgcgagctgggcgtgccggtgctgacggacgtgcactcgatcgaggagatcgaagcggtg
gcgtcggtcgtcgacgtgctgcagacgccggccttcctgtgccgccagaccgatttcatc
acggcctgcgcgcagtccggcctgccggtgaacatcaagaagggccagttcctggcaccg
cacgacatgaagaacgtcatcgacaaggcccgtgccgccgccaaggcgaaaggcctgaac
gaggacaacttcatggcctgcgaacggggcgcctcgttcggctacaacaacctggtctcg
gacatgcgctcgctggcgatcatgcgcgagaccggtgcgccggtggtgttcgacgcgacg
cactcggtgcagctgccgggcgggaatggcacgtcgtcgggcggcatgcgcgagatggtg
ccggtgctgtcgcgcgcggcagtggcggtcggcgtggccggcctgttcatggaaacgcac
ccgacgccggccacggcgctgtcggacggtccgaacgccgtgccgctgggccgcatgaag
gaattgctgtccacgctgatccagctcgatcgcatcaccaagcaggccgggttcctcgag
aacggcttcgagtaa
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