Pseudoduganella armeniaca: C9I28_23630
Help
Entry
C9I28_23630 CDS
T05378
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C9I28_23630 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masz03019
]
C9I28_23630 (groL)
03110 Chaperones and folding catalysts [BR:
masz03110
]
C9I28_23630 (groL)
03029 Mitochondrial biogenesis [BR:
masz03029
]
C9I28_23630 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masz04147
]
C9I28_23630 (groL)
Enzymes [BR:
masz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C9I28_23630 (groL)
Messenger RNA biogenesis [BR:
masz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C9I28_23630 (groL)
Chaperones and folding catalysts [BR:
masz03110
]
Heat shock proteins
HSP60 / Chaperonin
C9I28_23630 (groL)
Mitochondrial biogenesis [BR:
masz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C9I28_23630 (groL)
Exosome [BR:
masz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C9I28_23630 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C9I28_23630 (groL)
Exosomal proteins of breast cancer cells
C9I28_23630 (groL)
Exosomal proteins of colorectal cancer cells
C9I28_23630 (groL)
Exosomal proteins of bladder cancer cells
C9I28_23630 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5881
Motif
Other DBs
NCBI-ProteinID:
AVR98297
UniProt:
A0A2R4CF72
LinkDB
All DBs
Position
5411488..5413134
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVIFGDAARAKMVEGINILANAVKVTLGPKGRNVVLERSFGSPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKFVAAGMNPMDLKRGI
DKAVAATVEELKNIAKPCTTSKEIAQVGAISANSDSSIGERIAEAMEKVGKEGVITVEDG
KSLNDELDIVEGMQFDRGYLSPYFINNQEKQVAVLENPFVLLCDKKISNIRDLLPVLEQV
AKAGRPLLIIAEDIEGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGQV
VAEEVGLTLEKISLAELGQAKRIEVGKENTIVIDGAGEAAGIEGRVKQIRVQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARAALTVKGDNPDQEAGIKIVLRAMEEPLRMIVQNAGEEASVVVNAVLGGTGNYGYNAA
NGTYGDMVEMGVLDPAKVTRSALQNAASIAGLMLTTDCMVAEVVEDKPAGGMGGMGGMGG
MGGMDGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtaatcttcggcgacgcagcgcgcgccaaaatggtcgaaggcatc
aacatcctggcgaacgccgtcaaggtcaccctgggcccgaaaggccgcaacgtcgtgctg
gagcgctcgttcggctccccaaccgtcaccaaggacggtgtctcggtcgccaaggaaatc
gagctgaaggacaagctgcagaacatgggcgcgcaaatggtcaaggaagtcgcctccaag
acctccgacaacgccggtgacggcaccaccaccgcgaccgtgctggcccaagccatcgtg
cgcgaaggcatgaagttcgttgccgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggccgttgccgccaccgtcgaagaactgaagaacatcgccaagccatgcaccacg
tcgaaggaaatcgcccaggttggcgcgatctccgcgaactcggattcctcgatcggcgag
cgcatcgccgaagcaatggaaaaagtgggcaaggaaggcgtcatcaccgtcgaagacggc
aagtcgctgaacgacgagctggacatcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaaccaagagaagcaagttgccgtgctggagaatccgttcgtc
ctgctgtgcgacaagaagatctcgaacatccgtgacctgctgccggtactggagcaagtc
gcgaaagccggccgtccgctgctgatcatcgccgaagacatcgaaggcgaagccctggcg
acgctggtggtcaacaacatccgcggcatcctgaagacctgcgcagtgaaagcccctggc
ttcggcgaccgtcgcaaggccatgctggaagacatcgccatcctgaccggcggccaggtt
gtcgctgaagaagtcggcctgacgctggaaaaaatctcgctggccgaactgggccaagcc
aagcgcatcgaagtgggcaaggaaaacaccatcgtcatcgacggcgctggcgaagctgcc
ggcatcgaaggccgcgtcaagcagatccgcgtgcagatcgaagaagcgacctcggactac
gaccgtgagaagctgcaagagcgcgtggccaagctggccggcggcgttgccgtgatcaag
gttggcgctgccaccgaagtcgagatgaaagagaagaaggcccgcgtcgaagacgcgctg
cacgcaacccgcgcagctgtcgaagaaggcatcgtgccaggcggcggcgtggccctgctg
cgtgcccgcgctgccctgaccgtcaagggtgacaaccctgaccaggaagccggcatcaag
atcgtgctgcgcgcgatggaagagccactgcgcatgatcgtgcagaacgccggcgaagaa
gcttccgtcgtcgtcaacgctgtcctgggcggcaccggcaactacggctacaacgctgcc
aacggcacctacggcgacatggtcgaaatgggcgtgctggacccagccaaggtgacccgt
tcggccttgcagaacgctgcttcgatcgccggcctgatgctgacgaccgactgcatggtt
gccgaagtcgtggaagacaagccagccggcggcatgggtggcatgggcggtatgggtggc
atgggcggcatggacggcatgatgtaa
DBGET
integrated database retrieval system
