Pseudoduganella armeniaca: C9I28_26275
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Entry
C9I28_26275 CDS
T05378
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C9I28_26275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masz03021
]
C9I28_26275
03400 DNA repair and recombination proteins [BR:
masz03400
]
C9I28_26275
Enzymes [BR:
masz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C9I28_26275
Transcription machinery [BR:
masz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C9I28_26275
DNA repair and recombination proteins [BR:
masz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C9I28_26275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF7219
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AVR98746
UniProt:
A0A2R4CGL4
LinkDB
All DBs
Position
complement(6030268..6031245)
Genome browser
AA seq
325 aa
AA seq
DB search
MQNSLLKPRIIDVEALGAGHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSSLDGVQEDVVDLLLNLKGVVFKVHNRDSVTLTLKKEGEGAVLASDIDLPHDVEL
INPDHVIAHLTAGGKLDMQIKVEKGRGYVPGNVRRLSEDTNKTIGRIILDASFSPVRRVS
YAVESARVEQRTDLDKLIINIETNGVITPEEAIRQSARVLVDQLNVFAALEGTEAAAEAP
SRAPLVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRSENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagtttgttgaagccacgtatcatcgacgtcgaagccctgggcgccggtcac
gctaaagtcgtgatggagccgttcgagcgcggctacggccacacgctgggcaacgccctg
cgtcgcgtgctgctgtcgtcgatgatcggctacgcgccgaccgaagtcaccatcgccggc
gtcgtgcacgagtactcctcgctggacggcgtccaggaagacgtggtcgacctgctgctg
aatctgaagggcgtggtcttcaaggtccacaaccgcgattccgtcacgctgaccctgaag
aaggaaggcgaaggcgccgtgctggcatcggacatcgatctgccgcacgacgtggaactg
atcaatccggatcacgtgatcgctcacttgaccgccggtggcaagctggacatgcagatc
aaggtcgagaagggccgtggctacgtgcctggtaacgtgcgtcgcctgtccgaagacacg
aacaagacgatcgggcgcatcatcctggacgcatcgttctcgccagtgcgccgtgtttcc
tacgctgtcgaatcggcacgtgtggaacagcgtaccgacctggacaagctgatcatcaat
atcgaaacgaacggcgtcatcacgccggaagaagcgatccgccagtcggcacgcgtgctg
gtcgaccagctgaacgtgttcgccgcgctggaaggcacggaagccgccgccgaagcaccg
tcgcgtgcgccgctggtcgatccgatcctgctgcgtccggtcgacgacctggaactgact
gtccgttccgcgaactgcctgaaagccgaaaacatctactacatcggcgatctgatccag
cgttcggaaaacgagctgctgaagaccccgaacctgggtcgcaagtcgctgaacgagatc
aaggaagtgctggcatcgcgcggcctgaccctgggcatgaagctggaaaactggccgcct
gcaggcctggagaagtaa
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