Metamycoplasma arthritidis: MARTH_orf852
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Entry
MARTH_orf852 CDS
T00724
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mat
Metamycoplasma arthritidis
Pathway
mat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MARTH_orf852 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mat03400
]
MARTH_orf852 (recD)
Enzymes [BR:
mat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MARTH_orf852 (recD)
DNA repair and recombination proteins [BR:
mat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MARTH_orf852 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
PIF1
SLFN-g3_helicase
DEAD
ResIII
RsgA_GTPase
AAA_12
nSTAND3
RNA_helicase
NPHP3_N
AAA_16
AAA_14
ATPase
AAA_7
NTPase_1
AAA
MeaB
HHH_5
AAA_24
Mg_chelatase
PhoH
Sigma54_activat
T2SSE
DUF463
AAA_18
AAA_28
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ACF07572
UniProt:
B3PNH0
LinkDB
All DBs
Position
786169..788367
Genome browser
AA seq
732 aa
AA seq
DB search
MEEFVKVTGVFKKAIYERANGYKVFSFAIAHQEHPKEPIKTNHFGTISVVFNKLDVEVDK
YYDLVLEYQEASRYPNSYNLISLNESEYWKLNYIVKFLQSPHFPGIGPITAKKIVDKFGF
DTIKILTDDSSLNFLEFGMKKEAFEQMQTYLRENKQAVEDQIFFLKLNLSPDFYEKVNQK
FLTLESFINTYRDNFYEFYFDQQGLKISDLAKINKFFHPEGHEFDKAMIIYQALENFFFD
SGNTKTQISTFYSYFFKNIERVTVEEFKNNLKPLIVANKVLLFDNKSSITTSKLREMEEY
IVERMHRVQNGRNSLRDIKFEDNQFDYDSLQIEAINSALNEKMVLITGSPGTGKTLITNR
IIEELLKYYPEDRMAIVTPTGRATININKLSSKKAVTIHSFLQWDPDKNIFKINESWPES
IECLIIDEFSMVSVDLFFNLLKGISTRTLAKIILVGDKNQLPSIGPGYLIHDFIEANIFK
TIELTKIYRQSENYEIIQDAIDINEGRAPSFLGKNSQFRETKKEELAKKITEEISELLKQ
GYSKRDIAILSPIYNYQTGIDYLNDSLAKFWKKLENSEQNQISKTRKICLDDKVLNTVND
PSKKVFNGEIGYVSKFTFDKENSNIITHVAVDFEDDEKTVVYTKSEFLKKTIPAYCTSVH
KYQGSECKVVLTVLFSEAKRLLSKKLIYTAITRSKRLSIVFGEKEALEFGVKNDNDSHRQ
TCIKELWKAITE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtttgttaaagtaaccggcgttttcaaaaaagccatttatgaacgagcaaat
ggatataaagttttttcatttgcgattgctcaccaagagcatcctaaggagccaatcaaa
accaatcattttggcactattagcgtcgttttcaacaaattagatgttgaggttgacaaa
tactacgacttagttcttgaataccaagaggctagccgttatcctaatagctacaatcta
atttcgcttaatgaaagcgaatattgaaaattaaactatatcgtgaagtttttgcaaagt
ccgcattttcctggcataggccctattactgctaaaaagattgtcgataagtttggcttt
gacacgattaaaattctcactgatgatagctcgctaaattttttagaatttggtatgaaa
aaagaagctttcgagcagatgcaaacttatcttagagaaaacaaacaagccgttgaagac
caaattttcttcttaaagttaaatttgtcacccgatttttatgaaaaagttaatcaaaag
tttttgacattagaaagttttattaacacttatcgcgataatttttatgaattttatttt
gatcaacaaggcctaaaaatctcagacttagcaaaaataaataagttttttcaccctgag
ggacacgaatttgataaggctatgattatttatcaagcattggaaaatttcttttttgat
agtggcaatactaaaactcaaatttcaaccttctatagctacttttttaaaaatatcgaa
agagtcaccgttgaagaatttaaaaacaacttgaagccattaatcgttgctaacaaagtt
cttttattcgacaacaagagttctattactacttctaagctgcgcgaaatggaagagtat
attgttgaaagaatgcaccgggttcagaatggtcgcaactcattaagagatattaaattt
gaagataaccaatttgattatgatagtttgcaaatcgaagcaatcaacagcgctcttaat
gaaaaaatggtcttaatcactggcagtcctggcactggtaaaactttaattactaatcga
attattgaagaattgctgaagtattatccagaagatcgtatggcaattgttactcccact
ggaagggcgacgattaatatcaataaactctcttcaaaaaaagctgttactattcatagc
tttttacaatgagatcctgataaaaatatttttaagattaatgaaagttgaccagagtca
attgaatgtttaattattgatgaattttcgatggtgagcgttgatttattttttaattta
ttaaagggcatttcaacacggacacttgcaaaaataattctggttggcgataaaaatcaa
cttccttctataggaccaggttatttgattcatgattttattgaagcaaatatatttaaa
acaattgaattaactaaaatttatcgtcaatcagaaaactatgaaattattcaagatgct
attgatataaacgaagggagagcgccttcatttttaggcaagaattcgcaatttagagaa
actaaaaaagaagagttggctaaaaaaattactgaagaaattagtgaattgttaaaacaa
ggttatagcaagcgcgacattgctattcttagcccaatttataactatcaaacagggatt
gattatttaaatgattcactagctaaattttgaaaaaaacttgaaaattctgaacaaaat
caaatttctaaaactagaaaaatttgccttgatgataaagtactaaatactgtaaatgat
ccttctaaaaaagttttcaatggtgaaattggctatgtttctaaatttacttttgataaa
gaaaattctaatatcatcacgcatgtcgcagttgattttgaagacgatgaaaaaaccgtt
gtctatactaagagtgaatttcttaaaaaaactatcccagcttattgcactagtgtgcat
aaatatcaaggtagcgaatgtaaagtggttttaacggttctttttagcgaagcaaaaagg
cttttaagtaagaaattaatttacacagccattacgcgctcaaaaagactaagcattgtt
ttcggcgaaaaagaagctcttgaattcggtgtaaaaaatgataacgactcacatcgacaa
acctgtattaaagaattgtgaaaggcaataacggagtaa
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