Molothrus ater (brown-headed cowbird): 118683924
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Entry
118683924 CDS
T11569
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04382
Cornified envelope formation
mate04510
Focal adhesion
mate04512
ECM-receptor interaction
mate04518
Integrin signaling
mate04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118683924 (COL4A2)
04518 Integrin signaling
118683924 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118683924 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118683924 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118683924 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mate04147
]
118683924 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
mate00536
]
118683924 (COL4A2)
Exosome [BR:
mate04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118683924 (COL4A2)
Glycosaminoglycan binding proteins [BR:
mate00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118683924 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118683924
NCBI-ProteinID:
XP_036238480
LinkDB
All DBs
Position
2:24867854..25013092
Genome browser
AA seq
1715 aa
AA seq
DB search
MDISQLPSARTFLCQDTGLLLILMEVVLSAVKVDAGGKKYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPGITGPKGEVGQRGVTGFPGADG
IPGHPGQPGPRGKPGHDGCNGTAGDPGDAGTPGFSGFPGSIGVQGPKGQKGEPYIVAPEI
ISRHRGDPGDSGVIGFPGPPGTLGIQGPTGPRGQRGRPGPPGPPGPPGPQGNRGLGFYGE
KGEQGSPGPPGPPGLPTRELTGVPPDKHKGERGDPGPRGEAGIPGVLLFPLEKGEEGVVG
YPGQRGLPGITGFPGLSGERGIPGYDGPPGGHGPRGSKGEPGEMGPPGPDSYFPSRVPRK
GARGDPGFPGVSGLPGDRGDEGDRGLPGLPGFSDADGDKPGLPGEMGPKGEKGEIGSPAY
FAGPPGLPGKDGSPGIRGPPGPVGAPGPLFGLKGQEGTPGRFGMQGFPGPRGQKGPKGEE
GDCTRCLLGEELRRGSTGPRGPPGFPGTPGQPGRKGEPGDQGPHGLPGFPGAKGYSGPAG
FPGRKGEKGDSLHVTTKGTKGIRGDPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDAIRGF
PGDPGYPGELGPKGFPGEAGLPGEGFPGPKGFRGPPGDQGQAGSPGSPGLPGLPGEPGQL
DCGQVIEDFPRGDATEPIWSGAGCVRPPKGSQGKPGLPGATGAKGARGFPGDPGPMGFPG
LNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAPGPKGLPGDVF
GAAAGARGDVGLPGLPGLKGAPGDQGVPGTRGADGSPGLPGPKGDPGPQGLPGLMGLPGT
PGTHGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDKGDMGHTGL
PGIRGVTGPPGISGMDGFPGDKGLKGSPGIDGFKGMTGLKGRPGIKGIKGEFGPLGAQGD
KGSQGARGFKGDRGDQGPPGDPPKLMPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGL
PGKTGTPGSPGHPSYVAGVKGDIGAKGLTGVKGYPGPAGSPGIRGFPGTTGVRGEKGIPG
ISGHFGTPGSHGEIGDRGDTINLPGMPGLKGEVGVPGLTGIRGGVGPKGEGGDPGFPGIE
GLKGTQGVPGSVGQEGLPGLVGPPGQQGSPGTPGLTGQKGAPGWPGLPGQAGQPGFRGIS
GLHGLPGTKGLPGSPGPDGYGSAGFPGAVGDKGEAGEPSRVEGSRGPPGQKGERGVPGVP
GSFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGPQGQPGTPAPPGSKGESGET
GRTGEIGPKGSRGDPGLSGRPGLPGFPGPKGPRGEQGVIGFMGTVGFPGDLGPIGPKGDR
GVTGFQGPPGSPGRAPDPPRLVAEQGSPGPRGSIGPQGSPGDMGPQGPPGDPGFRGSPGE
PGLQGRGGIPAPPGSRGEQGGMGFQGPVGFEGQPGRPGSPGPPGMPGRSVSMGYLLVKHS
QSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLSRFSTMPFLYCNPGDICY
YASRNDKSYWLSTTAPLPMMPVAEEDIKPYISRCSVCEAPAVAIAVHSQEASIPHCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSGDTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgcagcttcccagtgcacgtactttcctctgtcaggatacggggctttta
ctgatcctgatggaagttgtgctgtcagccgtcaaagtggacgctggtggaaagaaatac
acaggaccatgtggaggcagagactgcagtggaggatgtcagtgtttccctgaaaaagga
agccgtggccagccaggactccttggatcacagggattcactggaccaccgggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatacccaggaata
actggacccaaaggagaagtgggacaaagaggagtcactggattccccggggcagatggc
attcctggtcatccaggccagccaggaccaagggggaaaccaggtcatgatggctgtaat
gggacagcaggtgatcctggtgacgcaggaactcctggattctctggtttccctggtagc
attggagtccaggggcccaagggccagaagggggagccgtacatagtggcgccggagatc
atcagccgacacaggggagatcctggggattcaggggtcattggttttccaggacctccg
ggtacgctgggtattcaaggacctactggtccaagaggacagcgaggaagaccaggacca
ccaggacccccagggcccccaggaccacaaggcaacaggggacttggcttctatggagaa
aaaggtgaacagggctctccaggtcctccaggtccacctgggcttcctacaagagaactg
acaggtgtcccccctgacaagcacaagggtgaaagaggagaccctggaccaagaggagaa
gctggaattccaggtgttcttctctttcctctcgaaaaaggtgaagaaggggtagtgggc
tacccaggacaaaggggactgcctggcatcactggttttccaggactcagtggagaaaga
ggtattccaggatatgatggtccacccggtggccatggtcccagaggaagcaagggggag
cctggcgagatgggtcctccagggccagattcctatttcccttcccgcgtcccaaggaaa
ggtgcaagaggtgatccaggcttcccaggtgtttctggactcccaggagacagaggagac
gagggagatcgtggattgcctggtcttcctggattttctgatgcggatggggataagcca
ggcttacctggagaaatgggaccaaaaggtgaaaagggtgaaattggatctcctgcttac
tttgcgggaccgcctgggcttccgggcaaggatggctcacccggaattcgtggtccacct
ggtcctgttggagcccctggtcctctctttggattaaaaggacaagagggaacacctggt
agatttggtatgcaaggtttccctgggccaagaggacaaaaaggacctaagggtgaagaa
ggggattgcactagatgccttttgggtgaggaactcagaaggggctctactggcccccgt
ggccctcctggctttccaggaactcctggccagcctggaaggaaaggagaacctggtgat
caaggaccacatggtcttcctggcttccctggagcaaaaggatattcgggtccagctgga
tttcctggacggaaaggagaaaagggagactctttacacgtaactacaaaaggcaccaaa
gggatccgaggagaccctgggctgcctggaatcagaggtgaggatggtttcccaggcaga
gatggattggatggtttaccaggacagcctggccttccgggtgatgctatcagaggtttc
cctggggatcctggttatccaggtgaattaggcccaaagggctttccaggagaagcaggc
ctgccaggtgaaggatttcctggtccaaaaggcttccggggtcctccaggtgaccaagga
caagctggaagcccaggatctccaggtctgcctggtctgccaggggagcctggccaacta
gactgtgggcaggtcattgaagactttcctagaggagatgcaaccgaaccaatatggtca
ggtgcaggctgtgtaaggccaccaaagggatcccaaggaaagccaggattgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccaatgggttttccaggg
ctaaatggtacacgaggtgatccaggtcgggaaggattcccaggtcctccaggtttcact
ggacccaggggagacagaggcccaaatgggctacctggactgcagggacacccaggcctt
acaggaaaatctggagctccaggagcaccaggaccgaagggccttcctggtgatgttttt
ggagcagcagcaggggcccgaggggatgtcggcctccctggcttgccagggctgaaaggt
gcaccaggagatcaaggagtaccaggaactagaggagcggatggtagcccaggtttgcca
ggacccaaaggagatcccgggccacaaggtctccctggtttgatgggattaccaggaaca
ccaggaacacatggattcccaggtccaccaggaaaccgtgggccagatggtggccctggc
tctcaaggacctctcggtccacctggtgctaggggagaagatggtgagcaaggttttcct
ggccccgtgggactgaagggtctgtctggtgacaaaggtgacatgggtcacacaggactg
ccaggtatacgtggtgtgactggtccccctggcataagtggaatggatggctttccagga
gataaaggcttgaaaggttcacctggcattgatggtttcaaaggcatgacaggcctaaaa
ggaagaccaggcatcaagggaatcaaaggagaatttggcccacttggggctcagggagat
aaaggctcacagggtgcacgtggcttcaaaggtgaccgtggggatcaaggccccccagga
gaccctccaaagctcatgcccagcatgatgatggaagttaaaggtgaaaaaggagatgtt
ggagaaaggggcacaaagggattctttggcttaaaaggtagcaagggaatgccaggcctt
cctggaaagacaggaaccccagggtcccctgggcatcccagctacgtggctggtgtgaaa
ggagacatcggcgcgaaagggctgacaggtgtgaaagggtatcctggtcctgctggttct
cctggcatcagaggcttccctggcaccacaggagtcagaggagaaaagggcattccagga
atttcaggccattttggtactcctggctcacatggagaaataggtgatcggggagatact
ataaacttaccaggaatgccaggcctgaaaggggaagttggtgtgccaggcttaacaggc
ataagaggaggtgtgggaccaaaaggagaaggtggtgatcctggtttccctggaattgaa
ggcctcaagggcacacagggtgtccctggctctgtgggacaggaaggtttgccaggactg
gttggccccccagggcagcaaggaagccctggcactcctggacttacaggtcaaaaggga
gctcctggctggcctggcttaccaggacaagcaggccagcctggcttcagaggaatcagt
ggactgcatggtttaccaggcactaagggcttaccaggatcaccaggtccagatgggtac
ggctctgcaggtttcccaggtgcagtgggggacaaaggagaagcaggagagccaagcaga
gtagaaggcagccgaggacctccaggccagaagggagagagaggtgttccaggagtccca
ggatcctttggtattcctgggcaggaaggatttccagggcctcctgggatttcaaatata
tcaggatatcctggtgataaaggctccccaggtctagatggagtaccaggctatccagga
ccacaggggcagcctggaacacctgctccaccaggaagcaaaggagaaagtggagaaaca
ggtaggactggagaaatcggcccaaaaggaagcagaggtgatcctggattatcaggaaga
cctggcctgcctggattccctggaccaaaaggtcccaggggtgaacaaggtgtcattggc
tttatgggcacagtaggatttccaggtgacctgggacccatcggacccaagggggataga
ggagtaacaggcttccagggacctccaggctctcctgggcgagcccctgatcctccaagg
ctggttgctgagcaaggttcaccgggtccccgtggaagtataggacctcagggaagccca
ggagatatgggacctcagggcccaccaggagatccaggtttcagaggctcaccaggagag
ccaggactccagggcaggggtggcattccagctcctcctggctccagaggggaacaagga
ggaatgggatttcagggtccggtgggatttgaaggccagccaggccgccccggcagcccc
gggcccccaggcatgccgggccgcagtgtcagcatgggatacctgctggtgaagcacagc
cagtccgaccaagagccaatgtgcccagtgggcatgaacaaactctggagtggatacagc
ctgctgtattttgaaggacaagagaaagcacacaaccaggatctagggctggctggctcg
tgtttgtctcgctttagcaccatgccattcctctactgtaaccctggggacatttgttac
tatgcaagtcgaaatgataaatcctactggctctcaaccacagcacctctcccaatgatg
cccgtggcagaagaagacattaagccatatatcagtcgctgctcggtctgtgaggcccca
gctgtggcaattgctgtccacagccaagaagcttctattcctcactgccctgaaggctgg
cgcagtttgtggatcggatattccttccttatgcacactgctgctggtgatgaaggtgga
ggacagtcgctggtttctcctgggagctgcctggaagatttcagggcgactcctttcatc
gaatgcaacggcgcccgcggaacctgtcactactttgcaaacaaatacagcttctggctc
accaccatcgaccagcccttccaaagcaagccctcgggagacacgctcaaggcaggactc
atccgaagccatatcagcagatgtcaagtctgtatgaaaaacttatag
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integrated database retrieval system
