Molothrus ater (brown-headed cowbird): 118684217
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Entry
118684217 CDS
T11569
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118684217 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mate01002
]
118684217 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mate00536
]
118684217 (SHH)
Peptidases and inhibitors [BR:
mate01002
]
Cysteine peptidases
Family C46: hedgehog family
118684217 (SHH)
Glycosaminoglycan binding proteins [BR:
mate00536
]
Heparan sulfate / Heparin
Morphogens
118684217 (SHH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
VldE
DrmE_C
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
118684217
NCBI-ProteinID:
XP_036234882
UniProt:
A0A7L3VEE1
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All DBs
Position
1:complement(8715064..8728280)
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AA seq
426 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEKGGTKLVKDLRPGDRVLVADTEGRLLYSD
FLTFLDREDGSHKLFYVIETRHPRARLLLTAAHLLFVAPQQNQSEAGSAGSGRALFASRV
RPGQRVFVLGEGGRRLLPAAVHRVSLREEASGAYAPLTAQGTILIDRVLASCYAVIEEHS
WAHWAFAPFRLLQALLAALCPAGVGCPMGDPTAPGIHWYSRLLYRIGSWVLDSDSLHPLG
MMVSSS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgctctggcgatctcggtgatgaaccagtgg
cccggggtaaagctgcgggtaaccgagggctgggacgaggacggccaccactccgaggag
tccctgcactacgagggccgcgccgtggacatcaccacgtcggaccgggaccgcagcaag
tacggcatgctggcccgcctggccgtcgaggctggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtcaaagcagaaaactcagtggcagccaaatctggtggt
tgcttccctggctcggccacggtgcacctggagaaaggtgggaccaagctggtgaaggac
ctgaggcctggagacagggtgctggtggccgacaccgaaggccgtctgctctacagcgac
ttcctcaccttcctggaccgcgaggacggctcccacaagctcttctacgtcatcgagacc
cggcatccccgggcccggctgctgctgacggccgcccacctcctcttcgtggcgccccag
cagaaccagtccgaggcggggagcgccggcagcgggcgggcgctgttcgccagccgcgtg
cggccgggccagcgcgtcttcgtgctgggcgagggcgggcggcggctgctgccggcggcc
gtgcaccgcgtgtcgctgcgggaggaggcgtcgggagcctacgcgccgctcaccgcccag
ggcaccatcctcatcgaccgcgtgctggcctcgtgctacgccgtcatcgaggagcacagc
tgggcgcactgggccttcgctcccttccgcctgctgcaggccctgctggccgctctctgt
cccgccggggtggggtgccccatgggagaccccacggcccccggcatccactggtactct
cggctcctctaccgcatcggcagctgggtgctggatagtgactctctgcacccgctgggc
atgatggtgtcgtccagctga
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