Molothrus ater (brown-headed cowbird): 118684291
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Entry
118684291 CDS
T11569
Symbol
RTTN
Name
(RefSeq) rotatin
KO
K16484
rotatin
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mate03037
]
118684291 (RTTN)
Cilium and associated proteins [BR:
mate03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118684291 (RTTN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
118684291
NCBI-ProteinID:
XP_036234986
LinkDB
All DBs
Position
1:96840376..96919773
Genome browser
AA seq
2230 aa
AA seq
DB search
MELAALVRKLGHELTEIRERSLKAILFKLDHNLISYADLVHEKALFRNLLEWFNFPVVPI
KEEVLNFVNSLIKHPPAAQKMIGIGAVEFFSQLRSDVDPNLQAIIDGIVDRLFFLSSELP
SSSSVCYQAQSQTSVDQPVLPQEELFTGYFCQSRSHLPQLEISPKRTVVKCLKFSTFPWL
TLTSTDRHVLSSNESSLRSNNQSLIWSTCELLQDVIMQDFPAEIFLQRPKIVQSLLSLLN
LAFGGDGRHQLALQAVSCLQQLCIFLRTRLNFHRDPSFSSSEQGTASQNSSISYCQEARG
APGSQNPSPGSSSPRPSVIGRTVQRPRGDGQDWDAVSSSGNSTQANANSRVSLHSPFDVG
RTDLPDIENEDTLELQMKQLSLPQFCVSILENAVPLLRTGSRRVTMEVLELLVEDMSLIG
DAISENVWEDDSLFALELRDKLLLVLGLLGETILYHKSNISAEQPKVMLVHHRMAFISIS
LFTVRLLQVLLPVEKASKVTQKSLLNALFLLSLDMSFSLEYPSMHESIAAYLEQMSTENY
SIYKQVSEAAYSIECTCSFMVEVHKEGDKNLSELLELADQALSSLPFHLHFPLLQECIHI
CSNIWKSAEANSLLQVEGQKLLLHLLSHPLLNIKAEAYHCCLEVVKDCLGIHNIAKPVPS
ICQGVHFLLHPKVLYEICTFGLQEDKSEVNSTAKAILIHLLQGRLMMEVLTWNKFIEALC
PVIPVLQGYADTKDTLGKCILSLSETTSDKGEGILPGTPRLQAALRLLFSKKQLVRSVAA
KHLAFHVLNEEGANLKRPCLNGNVLSSISNLFIIEGAMELKLDDKMNSIIKAETVEKLYD
ILTSDAVDLVLRKSAAEQLVVILEDTKMHDILKKLGVIEKILAYLNECVHVDGKLMESLV
VPCLALLRKIVCADPVARLSLAQQPSLLLLLFRVSLILQSDRAVLIEAAVLLCLLLFDEV
ARTETWADGITSNNTEAPAFSLPVAVVRRYHLPVRITAHHVVSPNTVVVPLSSECLAMKP
VADMLKTAWNLSWYHGIENLLQLVNYEKETETFLDSLKLSSEDILILKITHTNYGLQDCL
SLIIQAASHRDVRTALTRLSFYVLNDRLALKCSSGPCGTTLKSFVWQKAMNRFLQVLPAS
VEDEKLLVDVLRFLNKLFREQKSNLESDHLKWILKSLLKNQPKSLVGLLVRPESHVQDEM
DETQAAVRQRLDKELIRLFNLLLVCSMSVTDREGLELAGSFRTELALKLLQCLRLTDAPH
FYGLPSLERTLQGMVHVTALPGWSTYSAAVEPVTICKKYLTGLLEVISSFYVEWGGNAMS
FMGKGVTKSTVLCLLHLSHEMMAQAKDMDWISLWSLPYDSGEEQVLSHLGLAWLVPLWVD
RDPEVRFTALGIGSALTSLEIGCIALAESCQNISGGLWGTVINILLDQSECSMVRREAAF
ILQNLLVIPIPTEDMKDCIWQGPCVHDEESGLSQTGIPALKALLYHCQFYEHVNQMVKHC
YLGCYMFDLNSYKEDKLSIEKGGITDFDDSLNLWKAPPSQRKSSHSHSTSETMILSASPS
LGSVTELQATVPSSASFIPEAVVDRLTAQGQSDTTITESPSQHDSAMSAALSKQCTVVTP
ALLSAVCSLLHNLLFVMPKDTGIALQQTHLLTTLSSLVGANLVERYISELKAPLGHQCHM
EHVKAQVLLLLQYLSSVSRLLKSCLLVDSDLVSQDELLKPLLGNTFRILTIRPKAGLDPE
LMSVLHETWVDSFSLLATLLWKNGQISFPSVTAALANHCTAIIDTISDCIHLSTTYPALY
VGSLQFLSVLLNEEGRRQLQDKQSVCQNPTISFLLDHTEECQAPVTQLTALIIQVYERKS
SKDVLKEVATNALLSLLAVSKNAQKCALEADLIDSCIENMKNIHTQLNLDSLKPGKAQRK
KEDNLIKELRCSMQLLRNCLFQNEECKMAALKAHLVPVLHSLWPWLLADDSSMEIALHLL
CVYTANYPAGCASLCWASGGQSSLPSARSAAGNSLMHYILKLASHVSNDNSPVQQVVFCL
LSNLALSHDCKGIIQKSNFLQNFLSLSLPKGSNKNSGNVSTLWLKLLLNISFGEDGQQMV
MKINGFLDQIIEMCKYKHKSSQHLALLILHNICFSPANKPKILGNDQAIAVLSACLESNS
PTVQRIGAASLWALLHNYQKAKVTLKNPSIRRRIDEAYSLVKKSSPQPEENELHAYHLKC
LENVVQLLDC
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atggagctggcggcgctcgtcaggaagctcggtcatgaactgacagagataagagagcga
tctttgaaggctattctgtttaaacttgaccacaacttgatttcctatgctgatctggtc
cacgaaaaagcactttttcgtaaccttttggagtggttcaatttcccagtcgtaccaata
aaagaggaagtgttaaattttgtgaacagtttgatcaagcatccacctgctgcccagaaa
atgattggaattggtgcagtggaattcttctctcagcttcgctccgacgtggatccaaat
ttgcaggccataattgatgggattgtggacagactgttctttctttcttctgaactccct
tctagttcttcagtatgttatcaagctcagtctcagacttcagtagatcaaccagttctg
cctcaagaggaattattcactggatatttttgtcaaagtagaagtcatctgccgcagtta
gaaatatctcccaaaagaacagttgtgaaatgtttgaaattttccacctttccttggcta
actctgacttcaacagatagacatgttctttcatcaaatgaaagctctttgagaagtaac
aaccaaagtttaatttggagtacatgtgagcttcttcaggatgtgattatgcaagatttt
cctgcagagatcttccttcaaaggccaaagattgtacagagccttttatctcttctaaac
ttggcttttggaggagatgggagacaccagttggctttgcaggctgtgtcatgcttgcaa
cagctctgcatctttttgagaactaggcttaacttccatagggatccaagtttttcttcc
tcagagcaaggcacagcttcccagaattcatctatatcttactgtcaagaagcgaggggt
gctcctggttctcagaatccgtcacctggaagcagcagtcctcggccctctgtaattgga
cggacagttcagcgtcctagaggagatggtcaagattgggatgcagtatcttctagtgga
aacagtactcaagcaaatgcaaactccagagtctctctgcattccccatttgacgtagga
cgtactgacttaccagatattgaaaatgaggacactttggaattacagatgaagcagctt
agccttcctcagttttgtgtttccatcttggaaaatgcagtacctcttctaagaacaggc
agtaggagagtgacaatggaagttcttgaattgcttgttgaagatatgtcccttattggt
gatgctatttctgaaaatgtttgggaagatgacagcctttttgcattggaattgagagac
aaattgcttctggtcttgggtttgcttggagaaactatattatatcacaaaagcaatata
agtgcagaacagcctaaggtgatgctggtgcatcacaggatggcatttattagtatttca
ctcttcactgttaggttgctccaagtacttctccctgtagaaaaggcgagtaaagttaca
caaaagagtttgctgaatgctttgttccttctctcactggatatgtcattctccttggaa
tatccaagcatgcatgaatccattgcagcctatctggagcagatgagtactgagaactac
agtatttataagcaagtttcagaagctgcatattcgattgaatgcacttgtagctttatg
gttgaagttcataaggagggggacaagaatctttctgaattactagaattggcagatcag
gctttgagtagtctgcccttccacctacactttcccttgcttcaagaatgcattcacata
tgctcaaatatttggaagtctgctgaagccaactcattgcttcaggtggagggtcagaag
ttgcttctccatttattgtctcatcctttgttgaatataaaagctgaagcctatcactgc
tgtttggaagtggttaaggactgtctaggtatccataacattgcaaagcccgtgccgtca
atctgccagggagtgcattttcttctgcaccctaaagtgttgtatgaaatctgcacattt
ggccttcaggaagataagagtgaggtgaactctacagccaaggccattctaatacatctg
ttgcaaggacggttaatgatggaagtattgacttggaacaaatttattgaggctctctgt
cccgtaattcctgttttacagggttatgctgacacaaaagatactttaggtaaatgcatc
ctctctttgagtgaaacaacctctgacaaaggagagggcattcttccaggaactcccaga
ctacaggctgctctgcgccttctcttctcaaaaaagcagctggttcgttctgtagctgct
aaacatttagcattccatgttcttaatgaggaaggggcaaacctgaaacgcccgtgcctg
aatggtaatgtcctttccagcatttcaaacttatttattatagagggagctatggagcta
aaattggacgataaaatgaactcaataattaaggcagaaactgttgaaaagctgtatgat
attttgacttctgatgctgttgacctagttttacggaagtctgcagctgagcagctggtt
gttattttagaagataccaaaatgcatgacattctgaaaaagttaggtgtgatagaaaag
atattggcctaccttaatgagtgtgtacacgtggatggcaagcttatggaatccttagtg
gtaccatgtctggcactcctacgcaaaattgtgtgtgctgacccagttgctcgcctgtcc
ctagcacagcaaccctctctactgcttttgctgttcagagtttccctgatactccaaagc
gatcgtgctgttttaattgaagctgcagtattgctttgtcttctgttgtttgatgaagta
gcaagaacagaaacatgggctgatggcataaccagtaataatactgaggcacctgccttc
agtttacctgttgctgttgttagaaggtaccatctcccagtcaggatcactgctcatcac
gtagtaagccctaatactgtcgtggtgccattgtcttctgagtgcttggctatgaaacct
gtggcagatatgcttaagacagcttggaacctgtcatggtaccatgggattgaaaaccta
ctgcagctggtaaattatgagaaggaaacagaaacatttttagactcactaaaactttcc
tcagaagacattcttatattgaaaataactcacacaaactatggactgcaggattgtctt
agtttgataattcaggcagcatcccacagggatgttagaactgctctcactaggcttagc
ttctatgtcctgaatgacagacttgcattaaaatgcagttctgggccttgtggaaccact
ttgaaaagctttgtttggcagaaagcaatgaacaggtttctacaagtgcttccagcttca
gtggaggatgaaaagcttttggtagatgtcctaagatttttaaacaaattgtttagagag
cagaaatcaaatctggagtcagaccatctaaagtggatcttgaaatcattgcttaaaaat
cagccaaaatcccttgtgggccttctggtgcgaccagaatcccacgtgcaggatgaaatg
gatgaaacacaggctgctgtcaggcaacgactggataaagaactcattcgtctttttaac
ctgttgttagtttgttccatgtctgtgactgacagggagggcttggaacttgctggctca
ttcagaacagagctggctctgaagctgcttcagtgcttaaggctaacagatgcaccacat
ttttatggactcccatcactggagagaacgttacaaggaatggttcatgttactgcactt
ccaggctggagtacctattctgctgcagttgaacctgtcacaatttgtaagaagtattta
acaggtcttcttgaggtcatctcatcattttatgttgagtgggggggaaatgccatgtcc
ttcatgggaaaaggtgtgacaaaaagcacagtcctttgcttgcttcacttatctcacgaa
atgatggctcaagccaaggatatggactggatatctctttggtctttgccgtatgatagt
ggtgaagaacaagttctgtctcatctaggtctggcatggctggttcctttatgggtagat
agagatcctgaggtcagatttacagcacttggaataggatcagctcttacatctcttgaa
ataggatgtattgctttagcagaaagctgccagaatatttcaggaggcctgtggggaacg
gtgataaacatccttctggatcaatctgaatgtagcatggtacgcagggaggctgctttt
attctacaaaatctgcttgtgattccaatccctacagaagacatgaaagattgtatttgg
caaggtccttgtgtgcatgatgaagaatctggcctctctcagacaggaatacctgctctt
aaagcccttttgtatcactgccagttctatgaacatgtgaatcagatggtgaaacactgt
tacctgggatgttacatgttcgatttgaattcttacaaggaagacaagctcagcattgaa
aaaggtggtataactgattttgatgattctctcaatctttggaaggctccacctagtcag
agaaagtcttcacattctcactcaacatctgaaactatgattctgtctgcatcaccatca
ctggggagtgttactgagcttcaggcaacagttccaagctcagccagttttattccggaa
gctgtggttgatcggcttacagcacaaggtcagagtgatacaaccataacagaatctcca
agtcaacatgattctgccatgtctgctgctctgtctaaacaatgcactgtagtcacacct
gcccttttgtcagctgtttgcagccttctgcacaatctgctgtttgtcatgccaaaagat
actggaattgcccttcaacaaacacatttgctaacaactctcagcagtcttgttggtgct
aatctggttgaaagatacatctcggaactgaaagctccattgggtcatcaatgtcatatg
gaacatgtaaaagctcaggtcttgttactacttcagtacttgtcatctgtgtccaggctt
ctaaaatcttgtttgttggtggactctgatcttgtaagccaggatgaactgctgaaaccc
ctcttagggaataccttcaggattctcaccatacgtcccaaagctggcttagatcccgag
ttaatgtctgtgcttcatgagacgtgggtagactctttcagccttctagctacattactg
tggaaaaatggccaaatatcttttccatctgtgacagcagcccttgcaaatcactgtaca
gcaataattgataccatttctgattgtattcatctgtctaccacatatcctgctttatat
gtgggtagtttacagttcctctctgtccttttgaatgaggaaggaagaagacagctccag
gataaacagagtgtgtgtcaaaatccaactattagctttcttctggatcacactgaagaa
tgccaggcgccagtaactcaacttactgctttaattattcaggtctatgaaagaaaatct
tcaaaggatgtgctgaaagaagttgctacaaatgcactgttgtctctgttagctgtcagt
aaaaatgcccagaaatgtgctttggaagctgacctgatagacagctgtatagaaaacatg
aagaacatccacacacagctgaatttggattccctaaagcctgggaaagcacagagaaaa
aaggaggataaccttatcaaggagttaaggtgttcaatgcagctccttagaaactgcctc
tttcaaaatgaagaatgcaaaatggcagcactcaaagctcatcttgttcctgttctgcat
tctctgtggccgtggcttttagcagatgattcctcaatggaaatagctctgcatttgctt
tgtgtctacactgcaaactatcctgcaggttgtgcttcactttgttgggccagtggtgga
caatcatcacttccctctgcacgaagtgcagctggcaattcattaatgcattacatcttg
aaattggcttcccatgtgtcaaatgataacagcccagttcagcaagtggtcttttgtcta
ctatctaaccttgctctgtctcatgactgtaaaggcattattcagaagagtaacttcctg
cagaactttttatctctttcattgccaaaaggaagtaataaaaattctggtaacgtgtct
actctctggctaaagctgctactgaacatatcttttggagaagatggacaacagatggtt
atgaagataaatggctttttagaccagatcattgaaatgtgtaaatacaagcacaaaagc
agccaacatctagcacttcttattctacataacatatgttttagtccagctaataaacca
aagatattaggtaatgatcaagcaattgcagtactgtctgcctgtttggaaagtaacagt
cccactgttcagagaataggagcagcttcactttgggctttgcttcacaactatcagaag
gcaaaagtgactttgaagaatccatccataaggagaagaatagatgaagcttattcttta
gtgaagaaaagttctccccagccagaagaaaatgaactacatgcctaccatttaaaatgc
ttagagaatgtagtgcagcttcttgattgttaa
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integrated database retrieval system
