Molothrus ater (brown-headed cowbird): 118684844
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Entry
118684844 CDS
T11569
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04517
IgSF CAM signaling
mate04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118684844 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118684844 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mate04812
]
118684844 (SPTBN1)
Cytoskeleton proteins [BR:
mate04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118684844 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
118684844 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
118684844
NCBI-ProteinID:
XP_036235921
LinkDB
All DBs
Position
3:complement(4377875..4494027)
Genome browser
AA seq
2360 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEA
GYKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQ
ILSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERI
KDIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYST
QSLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTR
LRKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMN
NQASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAE
VIQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPKVAEDGDSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKE
SSPIPSPTSDRKAKSGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWH
NVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGN
EYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGK
REKDKEKDKEKRFSLFGKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacggtagcgacagattacgacaacattgagatccaacagcagtacagcgac
gtcaacaaccgctgggatgtggatgactgggacaatgagaacagctctgctcggctgttt
gagcgctcccgcatcaaggccctggctgatgaacgtgaggcagttcagaagaagaccttc
accaagtgggtgaattcccacttggctcgtgtgtcctgccggattacagacctgtacacc
gaccttcgagatgggaggatgctcatcaaactcctggaggtgctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagccctg
cagttcctgaaggagcagcgagtgcacctggaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggaccattatcctgagattccagatccaa
gatatcagtgttgaaactgaggacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaatgtcaatatccacaactttacaaca
agctggagggatgggatggcgttcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctcgaccctgaggatatcagtgttgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttggctgtcgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatacgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaattcgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acgaagaagcacgaggccatcgagacggacatcgcggcgtacgaggagcgcgttcaggcc
gtggtggccgtggcgaaggagctcgagaccgaaaactaccatgacatcaaacgcatcact
gcaaggaaggacaatgttatccgcctgtgggagtatctcctggagctgctccgggcacgg
agacagcgcctggagatgaacctcgggctgcagaagattttccaggaaatgctgtacatt
atggactggatggatgagatgaaggtgcttttactgtcccaagactatggcaagcatttg
ttgggagttgaggacctgctgcagaaacacgctctggtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccaccgatggagaagca
ggttacaagccctgtgacccacaggtgatccgggaccgcgtggctcacatggagttctgc
taccaggagctctgccagctcgcggccgagcgccgcgcgcgcctcgaggagtcccggcgc
ctctggaaattcttctgggaaatggctgaagaggagggctggatcagggagaaggagcag
atcctgtcatctgatgactacgggaaggacctaaccagtgtcgtccgactcttgagtaaa
cacaaggcgtttgaggatgagatgagcggccgcagcggccactttcagcaggcgataaaa
gaaggtgaagacatgatcgcggaagagcattttgggtctgagaagatcagagaaagaatt
aaggatatccgggagcagtgggctaacctggagcagttatctgccattaggaagaagcgg
ctggaggaagcctctctccttcaccagttccaggctgatgctgacgatattgatgcgtgg
atgttggacatcctcaagattgtctccagcaatgatgttggccatgatgaatattccact
cagtccttggtcaagaagcacaaagatgtggctgaagagattgcgagctaccggccgacc
atcgactctcttcacgagcaggccaaggccctgccgcaggagcacgcggagtctccggat
gtgcaaggcaggttgtccggaatcgaggagagatacaaagaggttgctgagctgacccgg
ctgcgtaaacaggccctgcaggataccctcgctctctataagatgttcagcgaggcagat
gcttgtgagctttggatcgacgaaaaggagaagtggctgaataatatgcagattccagag
aagcttgaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaac
aaccaggcatcccgtgtggccgtggtgaaccagattgccaggcagctgatgcacagtggc
caccctggggagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttc
agagaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactac
catcttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgattgagtcc
acacaagacctgggtaacgacctggctggagtgatggccttgcagaggaagctgacgggc
atggaacgggacctggtggccatcgaagccaagctcagtgacctgcagaaggaggcagag
aagctggaatcagagcatcctgaccaggcacaagccatcctttcacggcttgcagagatc
aacgacgtgtgggaagaaatgaagaccaccctgaagaaccgggaagagtccctgggagag
gccagcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccaga
acacagactgcaattgcctccgaagacatgcccaacaccctgacagaggctgagaagctg
ctcactcagcacgagaatatcaagaatgaaatcaacaactatgaggaagattatcagaag
atgagggacatgggtgagatggtgacacaaggacaaactgacgctcagtacatgttcctg
cgccagcgcctgcaggctttggacaccggatggaatgagcttcacaaaatgtgggagaac
aggcaaaatctcctttcccagtctcatgcctaccagctgttcctcagagacaccaagcaa
gcagaagctttccttaataaccaggagtatgttctggcgcacacagagatgccaaccacc
ttggaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgcc
aatgaagaaaagatcaatgcagttgtggagacaggcaggaggctcgttagtgatgggaac
attaactctgataaaatccaggagaaagtggactcaattgatgacagacataggaagaac
cgtgaagcagccagtgaacttttgatgagactgaaagataacagggatctccaaaagttt
cttcaggattgccaagagctctccctctggatcaatgagaagatgctcacagcccaggat
atgtcctatgatgaggcgaggaacctgcacagcaagtggctgaagcatcaggcattcatg
gcagagcttgcatccaacaaagagtggctggagaagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaggccgtggtgaaggagaagctgacaggtctccaccaa
atgtgggacgagcttgaatccaccacccagaccaaggctcagcgtctcttcgatgcaaac
aaggcagagctttttacccagagctgtgcagacctggataagtggctgaatggtttggag
agccaaatccagtcggatgactacggaaaagatctcaccagtgtcaacatcctgttgaag
aagcagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcaa
agccaggcaagggctttgagccaagagggcaagagcacagatgaagtcgatggcaaacgc
cttactgtagaaaagaaattcttggagctgctggagcctttgaatgagaggaaggccaac
ctgctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgg
gtcggagagaggatgcccatagctacatctactgatcatggacacaacctccagactgtg
cagctactaataaagaaaaatcagacccttcagaaagaaatccagggtcaccagcctcgt
atcgatgacatttttgagaggagtcagaacatcatcacagagagcagccccaatgctgaa
gtcatccagcagagacttgcagacttgaagcagctgtggaacctcctcatcgaggagacg
gagaagcgccacaagcgcctggaggagtctcacagggctcagcagtattacttcgatgca
gctgaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagcc
aaggatgaacagagtgcagtgtccatgctgaagaaacatcagattttggaacaagctgta
gaagattatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcacccagaaagcgagcgcatcagcatgcgccagtccaaggtggacaagctctacgcg
ggcctgaaggacctggccgaggagaggaggggcaagctggacgagaggcaccggctgttc
cagctcaaccgcgaggtggatgacctggagcagtggattgctgagagggaggtggtggcg
gggtcccacgagctgggccaggactacgagcacgtcacgatgctgcaggagcggttccgg
gagttcgcccgggacaccgggaacatcgggcaggagcgggtggacaccgtcaaccacatg
gccgacgaactcatcaactccggccactcggacgccgccaccatcgccgagtggaaggac
ggactcaacgaggcctgggcggatctcctggagctcattgacacgagaacacaaatcctc
gctgcctcttatgaactgcacaaattttaccacgatgccaaggagatcttaggacgtatc
caagacaaacataagaaactgcccgaggagcttggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacaacgtttgagcacgatatccaggccctgggcacccaggtgcga
cagctgcaggaggatgcagcgcgcctccaggctgcctacgccggggacaaggctgatgac
atccagaagagggaaaacgaggtcctggaggcatggaaggcactgctggatgcctgtgag
ggccgaagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggttcgg
gacctcatgctctggatggaagacgttatccggcagatagaagcccaagaaaagccaagg
gatgtttcatctgtggaactgctcatgaacaatcaccaggggatcaaagcagaaattgat
gcccgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaa
cactatgcatctgaggagatcaaggaaaagctcctgcagctgacagaaaagagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcaccag
ttctccagagatgcaagtgtggctgaggcctggctgctgggacaggagccctacctgtcc
agccgtgagatagggcagagcgtggacgaggtggagaagttgatcaagcggcacgaagcg
tttgagaaatccgcggctacctgggacgagaggtttgcagcgctggagagactgaccacc
ctggagctgctggaagtgcgtcggcagcaagaggaggaggagaggaagaggcagccgccc
actccggagcccaaggttgcagaggatggagactcccagcagcaatgggatgggacaaaa
ggagaacaagtttcccaaaacggtttgccctcagaccaggaatctccacgggtggcagaa
actgcagaaaccaatgaaatggtcaatggagctgcagaacagaggacgagttccaaagag
tccagtcccattccttccccgacgtcagaccgcaaagccaagagcggcgttcaggcccag
actgctgcaaccctcccggccaaaacgcaggagatcccctcggcccagatggagggcttc
ctacaccgcaagcacgagtgggagacacacagcaagaaagcctccagcaggtcatggcat
aacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcaaaagctgct
gcttctggcatcccttaccacaacgagatccccgtcagcttgaaggacgcagtctgcgaa
gtcgcggtcgattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaac
gaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatcaca
tcagcgatctcttcagacaaaatcgaagtgtccccgaccacccagagcactccagcctcc
agccgtgcccagaccttgcctgccagtgtcacaataaccagcgagtccagccctggcaag
cgggagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaaaagaag
tga
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integrated database retrieval system
