Molothrus ater (brown-headed cowbird): 118685305
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Entry
118685305 CDS
T11569
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118685305 (WDR43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mate03009
]
118685305 (WDR43)
Ribosome biogenesis [BR:
mate03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118685305 (WDR43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Utp12
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_Aladin
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_RIG_1st
DUF6235
UTP15_C
Motif
Other DBs
NCBI-GeneID:
118685305
NCBI-ProteinID:
XP_036236659
LinkDB
All DBs
Position
3:12661324..12685169
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AA seq
650 aa
AA seq
DB search
MAASPCAFSPRGCRLFASAGPDGRLRVWDTAGSRLQHEYVPSAHLSAACTCLAWAPAGAR
QPPSKDGPQRKKRKSEVGGEVDTQLDILAIGTAVGSILLYSTVKGELQSKLDGGHDSRVN
CVRWHQESCCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVTCLCISPDGKMLLSAGRTI
KLWDLETKEVYRHFTGHATSVSSLMFTTVKPTNESKPFDGITGLYFLSGAIHDRLLSVWQ
IRSDRKEKNAVMSFTVTDEPTFVDLTVSEVKEEPVKLAVVCRDGQLHLFEHILNGYCKKP
LTSNCTVQIATPGDGDSTPKPVPILAAAFCTDKQSLLLVYGNSLQPIIEKVSLNTSESHI
CLVRDIQKVLSLKTDAAVTKVKTPVVNSDAKVLVPGIPGHSTAVKTPALGKEKKKNKRKP
GETEESIEERLGALDIDVSKVKTPGGLPQTDSFAVLLVQGLESNDAEILNKVLNTRKENI
VKNTVARMPIHAVIPLLHELTKRLQGNPYSASLMVRWLKSVFTVHASYLSTLPDLIPQLG
MLYQLMESRVKTLQKLSRLHGRLFILVTQVAASQTVQDVPEVNQTAKLVYEDESSEEEGS
DDEMIADKDSDENWDEDEEKEEQSDEQDMTVEKEINGDSDLEPENESEEE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctccgtgcgccttctccccccgcgggtgccgcttgttcgcctcggccggg
cccgatgggcggctgcgcgtgtgggacacggccggtagccgcctgcagcacgagtacgtg
ccctccgcccacctcagcgccgcctgtacgtgcctggcctgggccccggccggtgcgcgg
cagccccccagcaaggatggcccccagaggaaaaaacggaagtctgaagttggaggagaa
gtggacacgcagttagatatcctggctattggtacagcagttggtagcattttgttgtac
agcacagtaaaaggagaattacagagcaagctagatggtggtcatgacagtagagtaaac
tgtgtgagatggcatcaagagagctgctgcttgtatagctgttcagatgacaaacacatt
gtggaatggaacacacagacctgcaaagtaaagtgtaagtggaaaggcgacaatagcagt
gtcacctgtctatgcatcagtccagatggaaaaatgctgctgtcagctggtagaactata
aaactgtgggacttggagaccaaagaagtctacagacatttcacaggccatgctacatca
gtgtcatcattaatgtttaccacagtgaaacctacaaatgaaagtaaaccctttgatgga
attacaggactttatttcttgtctggagctatacacgaccgattattgagtgtgtggcaa
atcagatccgatagaaaagaaaagaatgctgtgatgtctttcacagtaacagatgaacca
acttttgtggacctgactgtatcagaagtcaaagaagagcctgtgaagttagcagttgtg
tgcagagatgggcagttgcatttatttgaacatatcttgaatggttattgcaaaaaaccc
ttaacatcaaactgtaccgttcagatagcaacacctggggatggggactccacaccgaag
ccagtccctattctagcagctgcattttgtacagacaaacagtctctgctgctggtgtat
ggaaactccttacagcccatcatagagaaagtgtctttgaacaccagtgaatcccacata
tgtttggtacgggacatccagaaagtgttgtcacttaaaacagatgctgctgtaacaaag
gtaaagacacctgtggtgaactcggacgccaaagttctagtacctggcattccaggacat
agtacagctgtcaaaactccagccttgggaaaggagaaaaagaaaaacaagaggaaacca
ggagagacagaggagagcatcgaggagcgccttggggcgttggatattgatgtgagcaaa
gtcaaaactcccggtggccttccccaaacagacagctttgctgtgctgctggtccagggc
ttggaaagcaatgatgcagaaatcttaaataaagtgcttaacacaaggaaagaaaatata
gtaaaaaacacagtagccagaatgcctatacatgctgtcattccactgctgcatgagctt
acaaagagattgcaaggcaacccatacagtgcctcactaatggttcgatggctgaagtct
gtttttactgtacatgcatcctacctttccacattgccagaccttattcctcagctggga
atgttataccagttgatggagagcagagtaaaaactttgcaaaagctttcccgtctgcat
ggaagactcttcattcttgtcacccaggttgcagcatcacaaacagttcaggatgtaccg
gaggttaatcagactgcaaagctggtctatgaggatgagtcctcagaggaggaaggctca
gatgatgagatgattgcagataaagactctgacgaaaactgggatgaagatgaagaaaaa
gaggagcaatctgatgaacaagacatgactgttgaaaaggaaatcaatggtgattctgat
ttggagccagaaaacgaaagtgaagaagagtaa
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