Molothrus ater (brown-headed cowbird): 118685819
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Entry
118685819 CDS
T11569
Symbol
TRIM2
Name
(RefSeq) tripartite motif-containing protein 2 isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mate04121
]
118685819 (TRIM2)
Ubiquitin system [BR:
mate04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118685819 (TRIM2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
TEN_NHL
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
zf-ANAPC11
Beta-prop_IFT122_1st
Prok-RING_4
ANCHR-like_BBOX
PAF-AH_p_II
Mala_s_1-like
zf-RING_11
Caskin-tail
ChuX_HutX
Motif
Other DBs
NCBI-GeneID:
118685819
NCBI-ProteinID:
XP_036237392
LinkDB
All DBs
Position
4:29691782..29779194
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AA seq
748 aa
AA seq
DB search
MASEGSNIPSPVVRQIDKQFLICSICLDRYKNPKVLPCLHTFCERCLQNYIPAHSLTLSC
PVCRQTSILPEKGVSALQNNFFITNLMDVLQRTPDSSIEESSILETVTAVAAGKPLSCPN
HDGNVMEFYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEID
SALHFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQTQ
LDTLLEGQESIKSCSNFTAQALNHGTETEVLLVKKQMSDKLNELAERDFPLQPRENDQLD
FIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTVIGQPMSVTITTKDKDGELCKS
GNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIKGSPFKLK
VVRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRIGTKG
RNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVA
VHPSGDIIIADYDNKWVSIFSSDGKFKAKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVF
IFQPNGKIVTRFGSRGNGDKQFAGTLDGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFM
LKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGP
QGLALTSDGHVVVADSGNHCFKVYRYLQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaaggctccaacatcccaagtcctgtggtccgtcagattgacaagcagttt
ctgatttgcagcatatgcctggaccgttacaagaaccccaaagtacttccctgcctgcac
actttctgtgagaggtgtttacagaattacattccagcccatagcttaaccctttcttgc
cctgtgtgccgccagacctccattctgccagagaaaggggtttctgcactccagaacaac
ttctttatcaccaacctgatggatgtcctgcagcgaacgccagacagcagcattgaggag
tcctccatcttggagactgtcactgctgttgctgcaggcaaaccactctcctgccccaat
catgatggaaatgtgatggagttttactgccagtcctgtgagacagccatgtgccgggag
tgcactgagggagaacatgcagagcatcccacagtaccactcaaggatgtggtggagcaa
cacaaggcttccctccaagtccaattggatgctgtcaacaaaaggcttccagagattgac
tcagcacttcattttatatctgaaatcatacaccagttaaccaaccaaaaggctagcatc
gtagatgacattcattccacttttgatgaactccagaagactttaaatgtgcgaaagagt
gtgctgctcatggagctggaagtgaattatggccttaaacacaaagtcctccagacacag
ctggataccttactagaaggacaggaaagcattaaaagctgcagcaactttacagcccaa
gccctcaaccatggcactgaaaccgaagtgctgctggtgaagaagcagatgagtgacaag
ctgaacgaactggccgagagggacttcccgctgcagccccgagaaaacgatcagttggac
ttcatagtggaaacagaaggcctgaagaagtccattcacaacctgggcactattttaacc
accaacgctgttgcctctgaaacagttgccaccggtgagggactgaggcagacggtgatc
ggacagcccatgtccgttactatcacaaccaaggataaggatggggagctctgtaaatct
gggaatgcttacctcactgctgaactgagcacgcctgatgggagcgtagcagatggagaa
atacttgacaacaaaaatggcacttacgaatttttgtatactgttcagaaagaaggggac
ttcactttgtcactgagactttatgatcaacatatcaagggcagcccgttcaaacttaaa
gtggtcaggtcagcagatgtgtctcctaccactgaaggggttaagagacgtgttaaatct
ccaggcagtggtcatgtgaagcagaaagctgtgaaaagacctgcgagcatgtacagcact
ggcaaaagaaaagagaatcccattgaagatgatttgatcttcagaataggcaccaaagga
agaaataaaggggaatttacaaatcttcaaggtgtagctgcatctacaaatggaaaaata
ttaatagcagacagtaacaaccagtgtgtgcagatattttccaatgatggtcagttcaaa
agccgttttggcatacgaggaaggtctcctggccagctgcagcggccaacaggagtggct
gtgcatcccagtggtgacatcattattgcagactatgataacaaatgggttagcatattc
tcatcagatggaaaatttaaggccaaaattgggtctggaaagctcatgggcccaaaaggt
gtttctgtggatcgtaatggacacatcattgtagtggacaataaagcatgctgtgtcttc
atcttccagccaaatgggaaaatagtcaccaggttcggaagtcgaggaaatggtgacaag
cagtttgcaggtacacttgatggtcctcattttgcagctgtaaacagcaacaatgaaatt
atcattacagattttcataaccattctgtcaaggtctttaaccaggagggagagttcatg
ctgaagtttggatcaaatggagaaggaaatgggcaatttaatgcaccaactggagtagca
gtagattctaatggaaatattattgtagcagattggggaaacagccgaatacaggttttt
gatggaagtggatcatttttatcctacattaacacctctgctgaccccctttatggtccc
caaggtctggctcttacttcagatggccatgttgtagtcgcagactctggaaatcactgc
ttcaaggtctatcgatacttacagtag
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