KEGG   Molothrus ater (brown-headed cowbird): 118686587
Entry
118686587         CDS       T11569                                 
Symbol
LARP1B
Name
(RefSeq) la-related protein 1B isoform X3
  KO
K18757  la-related protein 1
Organism
mate  Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:mate00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mate03019]
    118686587 (LARP1B)
Messenger RNA biogenesis [BR:mate03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118686587 (LARP1B)
SSDB
Motif
Pfam: LARP1_HEAT La Vault SGP
Other DBs
NCBI-GeneID: 118686587
NCBI-ProteinID: XP_036238754
LinkDB
Position
4:complement(3813997..3841756)
AA seq 1001 aa
MSAAQVSERRGWGAAQEPRQPEPGSPRGEEAAEEGGRSREAPAPKENAWTRRRARRDSPS
PPAGPDGRLAAQEPELQNSTKVIKAGKPRTRKSSKADDLGDITSWPTPSEIASNECKTGS
HSKKPTNRREKEEKSDQKSNNGIKDNPEAKPDGPADNTSEDEAQTNNQRKKGNKQKWVPL
HLDDVRSDSQDRAGSRTSSRFVLETNKLIPHNNRRNEARSWRRDRDKREDHDEVCSVRSE
GGSVRGFSRGRGRGRSRGRGRGRGNPSMNFDYSVGYQELYGEGIDQVFQPELNPGVIYYY
GDGTGVQMYSVDEALLKEYIKHQIEYYFSTENLERDFFLRRKMDQQGFLPVSLIASFRRM
QALTTNAALILEALKDSTEVETVHQKLRKRVDPEKWPIPGPPPCNLPPTDFSQLINCPEF
IPGQTFGSHTESAPSSPRVGSPLSPKENTESSNFQTMSKGLSTSLPDLDSEPWIEVKKRH
RASTVKLKETVPVPDQTPDHHQPPQPQEEQEQEELEFLFDEEMEQNQCRKNKFTDWSDSD
SDYEIDDQDVNKILIVTQTPPFVKKHPCGDRAGNRVCRAKITSELAKVINDGLYYYEQDL
WMDQSENDAMMKQEIENFKKLNLINKDEFVSLAPETADPTQEVPPRPPGLQKAEELACNF
PSAEALPTAGMARSLPTAVPDSPRFHPGFIPRTPRTPRLQDPNKTPRFYPVVKEARSFDV
KAPRKRKTRHSTNPPLECHVGWVMDSRDHRPRASSVSSSNASPSEGAPLAGYGCTPNSLP
KFQHPSHELLKENGFTQQVYHKYRRRCLTERKRLGIGQSQEMNTLFRFWSFFLRDHFNKK
MYEEFKQLALEDAKEHYRYGLECLFRFYSYGLEKKFRKEIFEDFQQETKRDYEAGQLYGL
EKFWAYLKYSQHKTPAVDPKLQEYLSKFKRLEDFRVDPPLGEESGRRRTGEDSGHHRHQP
NSSKTLPTTKPAACQSRALGSVSSGNTVQATKSIESDVPEK
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgtccgcggcgcaggtgtcggagcggcggggctggggggcggcccaggagccccggcag
cccgagcccggctcgccccgcggggaggaggcggcggaggagggcggccggagcagggaa
gccccggcgcccaaggagaacgcgtggacgcggcgcagagcccggcgggacagcccttcc
ccgcccgcggggccggacgggcgcctcgcagcgcaggaaccagagctacaaaattccact
aaagtgataaaagcaggaaaacccaggacaagaaaaagcagcaaggctgatgatttgggc
gatatcacaagctggccgaccccaagcgaaatagcaagcaatgaatgtaagactggaagt
catagtaagaagccaacaaatagaagagaaaaggaggagaaatctgatcaaaaaagcaat
aatggaatcaaggacaatcctgaggcaaagccagatggtccagcagataacactagtgaa
gatgaagctcaaactaataaccaaaggaaaaaaggtaacaagcagaaatgggtgccgctg
cacttggacgatgtgaggtcagacagtcaagacagagcaggctctcgaacgagctccaga
tttgtgctggaaacaaacaagttaatacctcataacaacagaaggaatgaggcaagaagt
tggcgccgtgacagagacaagagggaggaccatgacgaggtgtgcagcgtgaggagcgag
ggcggcagcgtccgaggcttctccagaggcagaggaaggggcaggagcagaggaagagga
cgaggcagaggaaaccccagcatgaactttgactattcagttggttaccaagagctgtat
ggtgaaggaattgaccaagtgtttcagcctgagcttaaccctggtgtgatttattactat
ggtgacggaacaggagtgcagatgtattctgtggatgaagcacttctcaaggaatatatc
aaacaccagattgagtattatttcagcacagaaaatttggagagggatttcttcctgagg
aggaagatggaccaacaaggatttttgcctgtgtcactgatcgccagtttccgtcggatg
caagctctgaccacgaatgctgcactcattctggaggccctgaaggacagtacagaagtt
gaaactgtgcatcagaagctaagaaaaagggttgatccagaaaagtggccaattccaggt
cctcctccatgcaacctgcctccaactgacttttctcagctcatcaattgtccagaattc
ataccaggccaaacttttggctctcatactgagtctgcaccaagttctccaagagtgggg
agccctctgagtccaaaggaaaacactgaatcaagtaattttcagacaatgtctaaagga
ctgtctacaagtttgcctgatttggactctgagccttggatagaagtgaagaagaggcat
cgtgcatccactgtcaagctaaaggaaactgttcctgtacctgatcaaacaccagatcat
caccagccaccccaacctcaggaggaacaagaacaggaagaacttgaatttttgtttgat
gaagagatggaacaaaatcagtgtcggaaaaataaatttactgattggtcagatagtgat
tctgattatgaaattgatgatcaggatgtaaacaagattttaattgtaacacagacacca
ccatttgtgaaaaaacatccttgtggagaccgtgctggcaaccgtgtgtgccgtgcaaaa
attacatcagaactggctaaagtcattaatgatggcttgtactactatgaacaggatttg
tggatggatcagagtgaaaatgatgccatgatgaagcaagagattgagaactttaagaag
ctgaacctcattaataaggatgaatttgttagtcttgcaccagaaactgctgatccaacc
caagaagttcctccaagacctccagggttacagaaagcagaggagctggcctgtaatttc
ccaagtgctgaagcacttcccacagcaggaatggctcgatcactgccaacagcagtccca
gattccccccgtttccaccctggcttcatcccacgaacacctcgcaccccaaggctccag
gatcccaacaaaacacccaggttctaccctgtggttaaagaagcaagatcctttgatgta
aaggctccaagaaaaagaaaaactcgccacagtacaaatcctcccttggaatgccatgtt
ggttgggtgatggattccagagaccacaggccaagagcttcctctgtgagcagttctaat
gcctcaccttcagaaggagctccactggcaggttatggctgtactccaaattctcttccc
aaattccagcacccatctcacgaactgttaaaggaaaatggctttactcagcaggtgtac
cacaaataccggcggaggtgtttaacagagaggaaacggttgggaattggccagtcccaa
gaaatgaacacactttttcgtttctggtccttttttttgagagatcacttcaacaagaaa
atgtatgaagaattcaaacagcttgctctagaggatgcaaaagaacactacaggtacggc
ttggaatgcttgttcagattttacagctatggcctggaaaagaaattcaggaaagaaata
ttcgaggatttccaacaagaaacaaagagggactatgaagctggtcagctgtatggactg
gaaaaattttgggcttacctaaaatactctcagcacaagactccagctgttgaccccaaa
ctgcaagaatacctgagtaaatttaagagactggaggacttcagggtggatcctcctctt
ggtgaagaatctggcaggaggagaacaggtgaggattcaggacaccacagacatcagccc
aactcttctaaaacccttcccaccaccaaacccgctgcctgtcagtccagggcactggga
agtgtttcctctgggaatactgtgcaagccacaaaatctatagaaagtgatgtaccagaa
aaataa

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