Molothrus ater (brown-headed cowbird): 118686687
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Entry
118686687 CDS
T11569
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118686687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mate03021
]
118686687
03036 Chromosome and associated proteins [BR:
mate03036
]
118686687
Transcription machinery [BR:
mate03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
118686687
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
118686687
RSF complex
118686687
WICH complex
118686687
B-WICH complex
118686687
NORC complex
118686687
BRF complex
118686687
NuRF complex (fruit fly)
118686687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
118686687
NCBI-ProteinID:
XP_036238902
LinkDB
All DBs
Position
4:complement(7551259..7574198)
Genome browser
AA seq
1040 aa
AA seq
DB search
MSAGQPPPQPDEPPAPPLLPGANTSEAAGTGPPCAGGLAGGDIKMEESFDDASLAKQKEI
QETDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ
NLLSAGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQIRGLNWLIS
LYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLQNWMNEFKRWVP
TLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRI
KNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNN
CLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID
ILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLP
KLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHNERQASINAFNDPDSSKF
VFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV
EERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITDED
IDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKLAFTEWIEP
PKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYR
KTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQF
IKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQR
RISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDEL
RQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSA
QKRKMDGTPDGRGRKKKLKL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgggcagccgccgccgcagccggacgagccgcctgcgccgccgctgctaccg
ggcgccaacaccagcgaggccgcggggacggggccgccctgcgccggcggcctggccggg
ggcgacatcaagatggaggagtcttttgatgatgcgtctttggcaaagcaaaaagaaatc
caggaaacagatcctacatatgaagagaaaatgcaaacagacagagcaaacagatttgaa
tatctcttgaagcagactgagctctttgctcatttcattcagcctgctgctcagaaaact
ccaacttcacctttaaaaatgaaacctggacgtccacgaataaagaaggatgagaaacag
aatttactgtcagctggcgactatcggcaccgtagaacagagcaggaagaggatgaggag
ctgttaacagaaagctccaagacaacaaatgtctgcactcgatttgaagaatctccatca
tatgtgaaatggggaaagctgcgtgattaccagatccgaggactgaactggctcatttct
ctgtatgaaaatggcatcaatggcatcctggcagatgaaatgggtcttgggaagacactg
caaacaatttctcttcttggctatatgaagcactacagaaacattcctggacctcacatg
gtgttagttcctaagtccactctgcagaactggatgaatgaattcaagagatgggtacca
acacttcgagcagtttgtttgattggtgacaaagaccagcgagctgcctttgtgagagat
gtgttgctgcctggagaatgggatgtctgtgtaacatcatatgaaatgcttatcaaagag
aagtcagtattcaaaaagttcaactggagataccttgttatagatgaggcccacaggatt
aaaaatgaaaaatcaaagttatcagaaattgtaagggaattcaagactaccaaccgactg
ctattaactggaactccacttcagaacaatttacatgaactctgggcacttctcaacttc
cttttgccagatgtctttaactcagctgaagattttgattcgtggtttgataccaacaac
tgtctaggggatcaaaaactggtggagcgccttcatatggtgctacgaccattccttctc
cgtcgcatcaaggctgatgtggagaaaagcttgcctccaaagaaggaagttaaaatttat
gtgggcctcagcaaaatgcagcgagaatggtatacccgaatcctgatgaaggatatagat
atcctgaactcagctgggaagctggacaagatgagactgctgaacatcctgatgcagctg
cggaaatgctgcaatcacccgtacctctttgatggagcagagcctggcccaccttacaca
acagacatgcatttggtcactaacagtggcaagatggtagttctagacaaattgctacct
aagttgaaagaacaaggctcaagggttctaatcttcagtcagatgacaagagttctggat
attttggaagattactgtatgtggagaaattacgaatattgcagactggatggacaaact
cctcacaatgagcgacaggcttccattaatgcattcaacgatcctgacagctcaaaattt
gtgttcatgttgagtacacgagcaggaggtcttggaatcaatctggctactgctgatgtt
gtaattctctatgattcagactggaatccacaagtagatctccaggctatggatcgagcg
cacagaattgggcagaccaagactgtccgtgtgttcaggtttattacagacaataccgtg
gaggaaaggatagtggagcgtgcagaaatgaaactgcgcctggattccatagtcatccag
caaggaagattggtggatcaaaacctgaataaacttggaaaggatgaaatgctgcaaatg
atcagacatggagcaacacacgtgtttgcttcaaaggatagtgagattacagatgaagat
attgatcacattttggaaagaggggcaaagaagactgcggaaatgaacgaaaaactttca
aagatgggtgaaagctcccttaggaattttactatggatactgaatctagcgtgtataat
tttgaaggggaagactacagagaaaaacagaagttggcatttacagagtggattgaacca
cctaaaagagaaagaaaagccaattatgctgtggatgcttacttcagagaggctcttcga
gtcagtgaaccaaaagcacccaaggctccacggcctccaaaacagccaaatgtacaggac
ttccagttctttcctcctcgcctgtttgaactgttggaaaaagagattctctactacagg
aaaacaattggttacaaggtacctcgtaatcctgatctcccaaatgcagcccaagcacaa
aaggaagagcagcttaagattgatgaggctgaacctcttaatgatgaagaactggaagaa
aaagagaaacttctaacccagggcttcactaactggaataagagagatttcaaccagttc
atcaaagccaatgagaaatggggccgtgatgacattgaaaatatagcacgagaagtcgaa
ggaaaaaccccagaggaagtcattgagtattcagctgtgttctgggaaagatgcaatgaa
ctccaagacatagagaagatcatggctcagattgaaagaggagaagctagaattcagaga
cgaatcagcataaaaaaggctctcgatacaaagattgggagatataaagcccctttccac
caactaagaatatcctatggtactaataaagggaagaattacaccgaagaggaggatcgc
ttcctaatctgtatgcttcacaaactaggatttgataaagaaaatgtctatgatgaatta
agacaatgtatccgaaactcgccgcaattcagatttgactggtttctcaagtccagaact
gcaatggagctacaaaggaggtgtaatactttaatcacactcattgaaagagaaaacatg
gaactggaagaaaaggaaaaggcagaaaagaagaaacgtggaccaaaaccatcttcagca
cagaagcgcaaaatggatggcactcctgatgggcgtgggagaaaaaagaagctaaagttg
tga
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integrated database retrieval system
