Molothrus ater (brown-headed cowbird): 118687127
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Entry
118687127 CDS
T11569
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mate03021
]
118687127 (CTR9)
Transcription machinery [BR:
mate03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
118687127 (CTR9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
118687127
NCBI-ProteinID:
XP_036239762
LinkDB
All DBs
Position
6:complement(10575798..10596657)
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AA seq
1168 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKADEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHARNSNSDSEEGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSARASE
EESDSDRSPRKRRRSESEQSDNESVQSGRSRGSGGSENESRPASRSAESDRDSERGSDHE
GSARASGNESEPEASNDEGSEGGSDDSD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagatccctctccgggacaccgacgaggttattgagctcgac
ttcgatcagttgcccgagggtgatgaagttataagtatactgaaacaggagcacacccag
ctgcacatatggatcgccctagcgctggagtactacaagcaaggcaaaacagaagacttt
gtgaagctgctggaagctgcccgcatcgatggcaacctggactacagagaccacgagaag
gaccagatgacctgtctggacaccctggcagcctactatgtacagcaggctcggaaggag
aagaacaaagacaacaagaaggagctcatcacccaggccaccctgctgtacactatggct
gacaaaatcatcatgtacgatcagaatcacttgttgggaagagcctgcttttgcctgctt
gaaggtgataagatggaccaagctgatgcacagttccactttgtgctcaaccagtctcca
aataatatccctgccctactcggtaaggcatgcatttctttcaacaagaaggattataga
ggagcccttgcctactacaagaaagcactgcgtaccaatccaggctgcccagccgaggtt
cggttgggaatgggtcactgcttcgtgaagctgaacaagctggaaaaagctcgcctggcc
ttcagcagggctctggagctcaactccaagtgtgtcggggccttggttggactggctgtt
ctggaactcaataataaggaggctgattccatcaagaatggtgttcaactcctctctagg
gcttacacaattgatcccagtaatccaatggtgttgaatcacttggctaatcacttcttt
ttcaagaaggactatggtaaagtacaacacttggctcttcatgctttccataacacagaa
gtggaagccatgcaggcagagagctgttaccagctggcacggtcttttcatgtacaggaa
gattatgatcaagctttccagtattattaccaggccactcagtttgcctcgtcttctttt
gtacttccgttttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgct
tcacaatgctttgaaaaagtcttgaaagcctaccctaacaattatgaaactatgaaaatc
cttggatctctctatgcagcttcagaagaccaggagaaacgggatattgcaaagggccat
ttaaagaaagtcacagaacaatatcctgatgatgtagaggcatggattgagctagcccaa
attctagaacagactgatatacagggtgctctgtcagcctatggaacagccacacgcatt
ctgcaggagaaagtacaggctgatgtccctccagagatcctgaataacgtgggtgccctg
cacttcaggctgggaaacctgggagaagcaaagaaatacttcctggcgtcactggatcgt
gcgaaagcagaagctgagcacgatgagcattactacaacgccatctctgtgacaacatcc
tacaaccttgccaggctctacgaggccatgtgtgaatttcatgaagctgaaaagctctat
aaaaacattttgagagagcatccaaattatgttgattgctacttgcgcttgggagctatg
gccagggataaagggaatttttatgaggcttctgattggtttaaagaagcacttcagatc
aatcaggatcatccagatgcctggtctctgattggcaatcttcacttggctaaacaagag
tggggtccaggacagaagaaatttgaaagaatattgaagcagccctccacacaaaatgat
acatattccatgctggctcttggcaacgtctggttgcagactctccatcaacccacaaga
gacagagaaaaggagaagcgtcaccaagaccgtgcattagccatctacaagcaagtcctc
agaaatgacccaaagaatttgtatgctgccaatggcataggagctgtcttggcacacaaa
ggatatttccgtgaagcccgtgatgtttttgcccaagtgagagaggccacagcagatatc
agcgatgtgtggctgaatttggcacacatctacgtggagcagaagcagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaacactgaagtcttg
ttatatttggcccgggcactgtttaaatgtggcaaattacaggaatgcaaacaaactttg
ttaaaggccaggcatgtggctccaagtgatacagtcctcatgtttaatgtcgctttagtg
ctgcaaagacttgctacctctgtcctgaaagatgaaaaaagcaatctgaaggaagtcctt
aatgctgtgaaagagctggagctcgcccacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcacttgctgctacagaagccaggcagtgctctgactta
ctgagccaggcccagtatcatgtggctcgggcacgcaagcaggatgaggaggagagggag
ctgcgtgccaagcaggagcaggagaaggagctgcttcgccagaaactgcttaaagaacag
gaagagaagcgcctgagagaaaaagaagagcagaagaaacttctggaacaaagagctcaa
tatgtggagaagaccaagaatattctgatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggcggtggaggcaggcgttccaaaaaaggagcaggggagtttgatgag
tttgtcaatgatgacagtgatgaagatctgcccatctctagaaagaaaaagaagaggaag
ggcagtggcagtgaacaggatggagaagaagaggagggtgagagaaagaagaagaagagg
aggagaccccagaaggcagatgaggggagtgatgatgaggaacacgaaaacggcccgcgg
cctaagaagcgacgtccacccaaagcagagaagaagaaggctcccaaaccagagcgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgatgattct
tctgatgaggacaaactcaaaattgctgatgatgggcacgctagaaatagcaacagtgat
tctgaggagggcgagcagcagcacagcaaacgcattgtttccgacagcgattccgataac
aggaacaagtcgggcagcgaggccggcagcccccgcaggtccagcgcccgcgcctctgag
gaggagtctgacagcgaccggtccccgaggaagaggcggcgctcggagtcggagcagtcg
gacaatgagtccgtgcagtcggggaggagccgcggctccggcggctccgagaacgaatcg
aggccggcttcgcgcagcgccgagtccgacagggactccgagaggggctctgaccacgag
gggtctgccagagcttctggcaacgagtccgagccagaggcatccaatgatgagggctct
gaagggggctcggatgacagcgattag
DBGET
integrated database retrieval system
