Molothrus ater (brown-headed cowbird): 118687167
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Entry
118687167 CDS
T11569
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mate04121
]
118687167 (UBR1)
Enzymes [BR:
mate01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118687167 (UBR1)
Ubiquitin system [BR:
mate04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
118687167 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
WHD_UBR1
zf-UBR
ClpS
STAC2_u1
Motif
Other DBs
NCBI-GeneID:
118687167
NCBI-ProteinID:
XP_036239821
LinkDB
All DBs
Position
6:complement(26819080..26878957)
Genome browser
AA seq
1758 aa
AA seq
DB search
MADGADRGPVAGAAGGRAAAQAPEPAMWCDERFDFQATFLQCLAKHVPNIYSAEMDPLVE
KQEEMVQAAILYPLECYLFGEDPDMFLEKLQQSGTSQLCGKVFKGGETTYSCRDCAVDPT
CVLCIDCFQNSIHKNHRYKMHSSTGGGFCDCGDTEAWKAGPLCTKHEPGASSSPKENSEC
QLNEEIMEHSRRVFPSVIKYIVDMLIWEEEKELPEELTISREKVDSYYCVLFNDEHHSYD
HVIYSLQRALGCELGEAQLHTTAIDKEGRRAVKAGHYASCQEAKEEIKRHSENVSQRPLH
VEVLHADVMAHQKFALRLGSWLNKLMSYSSDFRQIFCQICLKEEAGSEKPCFISKLMLWD
ARLHKGARKVLHELIFSSFFMEMEYKKFFAVEFVKYYKALQKEYISDDHDRFLSVTALSV
QMFTVPTLARHLIEEQNVITTITETLLEVLPEYLDKNDKFNFQGYSQDKLTRVYSVIYDL
RYILVSKPTVWTDRLRERFLEGFVSFLRILTCMQGMEEIKRQIGQHIEVDPDWEAAITIQ
MQLKNILLMFQEWCASDEELLLRSYRECHKAVMRCSMNGRSREKTIFHLCGHTLESRPYR
VSADPVSIHLPLSRTLAGLHVRLSKTGAISRLHEFVSPEEFQVELLVEYPLRCLVLVAQV
AAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNQFLLLILQRYELAD
AFKKIKPTKDQDLIKQYNVLIEEMLQILIYIVGERYVPGISNVTKEDVIMREIIHLLCIE
PMAHSAITKSLPENENNETGLENVINKVATFKKPGVSGHGVYELKDECLKEFNMFFYHYT
KTQHSKAEHTQKKRRKQENRDEALPPPPPPDFSPAFSNVVRILNCDVMMHILRTLLQRAV
ELETHLWTEAMIQMVLHLLSLGLLEEKQQLQKSPEEEVTFDFYHKATRMGSSALNAVNVL
MLLEKLKRVPQLEAQKDTVNWILQMFDLVKRLREKSSLVTVGATSGSEATKGDETQSTQD
KEKAERKRKAEAARLHRQKIMAQMSALQRNFIETHKLLYENTLEAQGKDDAIMEEESTSS
AIDYSRIALGPKRGPSVIEKEVLTCILCQEEQEVKFESAAMVLSACVQKSTALTQNRSRI
LELSGDTLDPLFMHPDLPCGTHTGSCGHVMHAACWQKYFEAMQLNFRQRLHVEQIFDLEN
GEYLCPLCKSLCNTVIPIVPLQAQKINSEDAEAVAQILSLARWLEIVTVRISGYSVKNAK
GEKQSLPPFTNKGTGNSTLEFHSILSFGVQSSAKYSSSIKEMLILFATTIYRVGLKVAPN
EADSRIPMMTWSTCAFTIQCIENLLETEGKPLFGSLQNRQHSGLKALVQFAAAQRTTSPQ
LLIQKHLIRLLGVLLPNYKGEDTPSLLEVDMFHILVGAVLSFPSLYWEDAVDLQPSSVSS
AYNHLYLFHLTTLAHIMQIVISSATESPTAHTSDNSEEAQSAQSFCREVCQYTSGCFSQD
IPGWLVWDCVKKGIMPYLRCAALFFHYLLGVSPPEELLQVSEEGQFKALCSYLSLPTNLF
VLFHEYWDTVNPLLQRWCTDPVVLSCLKGKSIAIRYPRKRNHLIELPEDYSCLLNQASQF
RCPRSSDDEQKHPVLCLFCGAMLCSQNTCCQELVNGEELGACTSHALQCGAGVCMFLKIR
ECKVVLIEGKTRGCLYPAPYLDEYGETDPGLKRGNPLHLCQERYRKLHLLWQQHCIIEEI
ARSQETNQIFFGFNWQLL
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagccgacagaggtcccgtggcgggagcggcgggcggccgggccgccgcg
caggccccggagccagctatgtggtgtgatgaaagattcgacttccaagctacattttta
cagtgcttggcaaaacatgtgccaaatatttactctgctgaaatggaccccttggtggag
aaacaagaagaaatggtccaggcagcaatattataccccctggaatgttatttgtttggg
gaggacccagatatgttcctggagaaactacagcagagtggaacctcccagctgtgtgga
aaggtgttcaaaggaggggagacaacatactcctgcagagactgtgcagttgatccaact
tgtgtgctctgtattgactgcttccagaatagcattcacaagaaccaccggtacaagatg
catagctccactggaggtggattttgtgactgtggggatacagaggcatggaaggctgga
ccgctgtgtactaaacatgagcctggagcatcaagctctccaaaagaaaattctgaatgt
cagttgaatgaagaaattatggagcattctagaagagtgtttccctctgtgataaaatac
attgtagatatgcttatctgggaggaagagaaggaactacctgaggagcttaccattagc
agagagaaggtcgacagctactactgtgtccttttcaatgatgaacaccattcttatgat
catgtcatctacagcctgcaaagggcacttggctgtgaacttggtgaagcccagttgcat
acaactgccatagataaagagggtcgtagagctgttaaggcaggacattatgcctcttgt
caggaagcaaaagaagaaattaagaggcattctgaaaatgtttctcaacggcctcttcac
gtggaggttctgcatgctgatgttatggcacatcagaagtttgccttgcgccttggttct
tggctgaacaaactcatgagctattcaagtgactttcgccagatcttttgtcaaatatgt
ctcaaggaagaagctggttctgaaaagccctgctttataagcaagttgatgctatgggat
gcaaggcttcataaaggggcaaggaaggttcttcatgaacttatcttcagtagttttttc
atggaaatggaatacaaaaaattttttgctgttgaatttgtgaagtattacaaggcattg
caaaaggaatacatcagtgatgatcatgacagatttctctctgtgacagcgctctcagtt
cagatgttcactgtacctactctggcccgacatctaattgaagagcaaaatgtaatcacc
accattacagagacactcctagaagtgcttccagagtacctagacaaaaatgacaagttc
aacttccaaggctacagtcaagacaaactgacccgggtatattcagtaatatatgacctc
aggtatatcttagtcagcaaacctacagtatggacagaccgtctgagggagcgtttttta
gaaggatttgtttctttcctaaggattctaacttgcatgcagggaatggaggagataaaa
agacagattggtcagcacatcgaggtggaccctgactgggaagcagctattaccatacag
atgcagctcaagaacattcttttgatgttccaggagtggtgtgcctctgatgaagagctg
ctgctcaggtcttacagagaatgccataaggctgtgatgaggtgcagcatgaatggccgc
tctcgggagaagacaatatttcacttgtgtggccataccctggagagcagaccttacaga
gtgtctgcagatcctgtcagcatacatttgccactgtctaggactcttgctggtcttcat
gtacgattaagcaagaccggagccatctcaagattgcacgagtttgtttctcctgaagaa
tttcaagtggagctgctagtagaatatcctttgcggtgtcttgtcctggttgcacaggtt
gctgcagagatgtggaggaggaatgggctctccctgataagccaggtattctattatcaa
gatgttaaatgcagagaagagatgtatgataaagacatcatcatgctccagataggtgca
tctctcatggatccaaaccagtttctcctgctgatactgcagagatatgagcttgctgat
gctttcaaaaagatcaaacccaccaaagatcaggatttgattaagcaatataatgtttta
atagaagagatgctacagattctcatctatattgtgggggaaagatatgtgcctggaatc
agtaatgtgacaaaagaagatgtaataatgagagaaatcatccatctgttgtgtattgaa
ccaatggctcacagtgcaattaccaagtcattgcctgaaaacgagaacaatgaaactggc
ttggagaatgtaattaataaagtggctacattcaagaaaccgggtgtctctggtcatgga
gtttatgaactaaaagatgaatgtttgaaggaattcaatatgttcttttatcactacact
aagacccagcacagcaaggctgaacatacacaaaagaaaagaagaaaacaagaaaacagg
gatgaagcattgccaccacctcctcctccagacttcagtcctgcattcagcaatgtggtg
aggattctgaactgtgatgtcatgatgcacatcctgcgcaccctcctgcagagggcagtg
gagctggaaacccacttgtggactgaggcaatgatccaaatggttcttcatcttctttct
ttaggattactagaagagaagcagcagttacagaagtctcctgaggaagaagtaaccttt
gatttttatcacaaagcaacacgaatgggaagctcagccttgaatgctgtgaatgtgtta
atgcttctggagaaattgaagagagttccccagttagaggcacagaaggacacagtcaat
tggatactgcagatgtttgacctggtgaagagattgagagaaaagtctagtttggtaaca
gtaggagctacatcaggctcagaagctacaaaaggtgatgagacacagagcactcaggat
aaagagaaagctgagcggaagaggaaggcggaagcagcgaggttgcaccgtcagaagata
atggcccagatgtctgccctgcagaggaatttcattgaaacccacaagctcctgtatgaa
aacacactggaggcccaggggaaagatgatgctattatggaagaagaaagcacctcttca
gcaattgattactccagaattgctttgggtcccaaacgaggtccatctgtcattgagaag
gaagttttgacctgtattctttgtcaggaagaacaggaagtaaagtttgaaagtgctgcc
atggtattatctgcctgtgtgcagaagtcaactgccttaactcagaataggagcagaatt
cttgaactctcaggagatacacttgatcctctcttcatgcaccctgacttaccttgtggg
acccacacagggagctgtggtcatgtaatgcatgcagcctgctggcagaagtactttgaa
gcaatgcagctgaacttccgacaacgtctgcatgttgaacagatatttgacttggagaat
ggagaatatctttgtcccctttgcaaatctctgtgcaatactgtgattcctattgttcca
ctgcaggctcaaaaaataaacagcgaggatgcagaggcagtagctcaaatcctgtcccta
gctaggtggctggagattgtcacagtcaggatatcaggctacagtgtgaaaaatgctaaa
ggagagaaacaaagtcttccacctttcaccaacaagggaacagggaactcaactttggaa
ttccattccatccttagttttggagttcagtcctcagccaagtactcaagcagtatcaaa
gagatgcttattctctttgccaccaccatttacagagttgggctcaaagttgctccaaat
gaagctgattcccggattcctatgatgacctggagcacttgtgcttttaccatccagtgt
atagaaaacctcttggaaacagagggcaagcctttatttggatccctacaaaatagacag
cacagcggccttaaagcattagtgcagtttgcagctgctcagagaacaacatccccacag
cttctgatacagaaacacctgattcgtcttctaggagttctcctaccgaactataaaggg
gaggacacgccatcactcttagaagtagatatgttccacattttggtgggagctgtatta
tcctttccatctttatactgggaagatgctgtagacttgcaaccttcatcagttagttca
gcctataaccacctctacctcttccatctgacaacactggcacacataatgcaaatagtc
atctcttcagcaacagaatcccctactgctcacacatctgacaatagtgaggaggcacaa
tctgcacagtctttctgtagagaggtttgccaatacaccagtggttgcttcagtcaggat
attccaggctggcttgtgtgggattgtgttaaaaaaggcatcatgccttaccttcgttgt
gctgctttattttttcattatttgctgggagtttctccacctgaggagctactacaagtt
tctgaagaagggcaattcaaggcactttgtagttacctctctctacctacaaatttgttc
gtgctcttccatgaatattgggacacagtaaatccactgcttcaaaggtggtgtactgat
ccagtggtgttaagttgtttgaaagggaaaagcattgcaataaggtatcctaggaaaaga
aatcatttaatagagcttcctgaagactacagttgccttctgaatcaagcctctcagttt
agatgcccacggtcttctgatgatgaacaaaagcacccggtattgtgtttattctgtggg
gcaatgctatgttcccagaacacttgctgtcaggagctggtgaatggggaggagctggga
gcctgtacttctcatgctcttcaatgtggagctggagtctgcatgtttctcaaaatcagg
gaatgcaaagttgtcctcattgaaggtaaaaccaggggctgcttatatcctgcaccctat
ttggatgaatatggagaaacagatccaggtctaaaaagagggaatcccctgcacttatgt
caggagcgttaccggaagctccatctgctgtggcagcagcactgcatcatagaggagatt
gccaggagccaagaaacaaatcagatcttctttggattcaactggcagctgctctga
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