Molothrus ater (brown-headed cowbird): 118687172
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Entry
118687172 CDS
T11569
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mate04131
]
118687172 (SCFD1)
Membrane trafficking [BR:
mate04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
118687172 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118687172 (SCFD1)
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Paralog
GFIT
Motif
Pfam:
Sec1
DGAT3_N
cwf21
Motif
Other DBs
NCBI-GeneID:
118687172
NCBI-ProteinID:
XP_036239835
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Position
6:35527520..35575981
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AA seq
632 aa
AA seq
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MAAGIREKQTVALKRMLNFNVPPVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDAIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDI
ANAAIGANAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETIM
DTIVDSLFCFFVTLGAIPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQ
FSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESAGTESTPAGARPK
KKNKKSYDLTTSDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGIEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKSRKLDVYFEYEEKIMS
KSTLDKSLLDMISDPDAGTPEDKMRLFLIYYISSAQAPSEIDLEQYKKALMDAGCNLAPL
SYIKQWKAFTKMASAPTSYGNATPKPLGLFSRVMNTGSQFVMEGVKNLVLKQQNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLIDY
IKGKQGKHVLYGCSELFNATQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggatccgggagaagcagacagtggctttgaaacgtatgctgaacttcaat
gttcctccagttaaaaacagcacaggagaaccagtatggaaggttctcatttatgacaga
tttggccaagatatcatctcacctttgctgtcagtgaaagagctgagggatatggggatc
actttgcatctgcttttgcattcagatcgggatgctattccagatgtcccagctgtttac
tttgtaatgccaacagaagaaaatattgacagaatgtgccaggatcttcgaaatcagctt
tatgagtcttactatttaaacttcatttctgccatttcaagaagtaaactggaagatatt
gcaaatgctgctataggtgctaatgcagtaactcaagtggctaaggtattcgatcagtat
cttaattttattactttagaagatgatatgtttgtattgtgtaaccaaaacaaagaactt
gtttcataccgtgccattaaccgaccagatataacagacacagaaatggaaactataatg
gacactattgttgatagtctcttctgtttttttgttacccttggcgctatacctataatc
agatgctcaagaggaactgcagctgaaatggtggcagtgaaactggataagaagctcaga
gagaatctaagagatgccagaaacagtctttttacaggtgacacactcggagctggccag
ttcagcttccaaaggcccttattagtccttgttgacagaaacatagatttagcaactcct
ctacatcatacttggacataccaagctttagtgcatgatgttctggatttccatttgaat
agagttaacttggaagaatcagcaggaacagaaagcactccagcaggtgcaagacctaag
aaaaaaaataagaagtcctatgatttaactacatctgataaattctggcaaaagcataag
ggcagtccttttccagaggtggccgagtctgttcagcaagaactggaatcttacagagcc
caagaagatgaagtcaaaagacttaaaagtatcatgggcattgaaggggaggatgaagga
gcaataagtatgctttcagataatacagctaagctaacttcagctgtcagctctcttcca
gaacttctggaaaagaagaggctcattgatcttcatacaaatgttgcaactgccgttttg
gagcacataaagagtcgaaagctggatgtgtattttgaatatgaggaaaaaataatgagc
aaatccactctggataaatctcttctggacatgatttctgacccagatgcaggaactcct
gaagacaaaatgcgattatttctcatctattacataagctcagctcaggcaccttcagag
attgatttggagcagtataaaaaagcattgatggatgcaggttgtaatcttgctcctttg
agctacataaaacaatggaaagctttcactaagatggcttcagctccaaccagctatgga
aacgctacacctaaacctttgggtctgttttcacgtgttatgaatacaggatcacagttt
gtaatggaaggagtgaagaacttggtactgaagcaacaaaatctgccagtcacacgtatt
ttggacaaccttatggagatgaagtcaaaccctgagacagatgactaccggtattttgac
cccaagatgctgcgaggcagtgacagttcagttccaagaaataaaaatccattccaggag
gccatagtgtttgtagttggaggaggaaactatattgaatatcaaaatcttattgactac
ataaagggtaaacaaggcaaacatgtcctgtatggctgcagtgaactttttaatgccaca
cagtttataaaacagctgtcccagcttggccagaaataa
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