Molothrus ater (brown-headed cowbird): 118687472
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Entry
118687472 CDS
T11569
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04140
Autophagy - animal
mate04142
Lysosome biogenesis
mate04145
Phagocytosis
mate04148
Efferocytosis
mate05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
118687472 (VPS18)
04142 Lysosome biogenesis
118687472 (VPS18)
04140 Autophagy - animal
118687472 (VPS18)
04148 Efferocytosis
118687472 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118687472 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mate04131
]
118687472 (VPS18)
Membrane trafficking [BR:
mate04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118687472 (VPS18)
Hops complex
118687472 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_5
zf-RING_Vps41
aq_1631
zf-RING_16
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
DUF8221
Nup54_57_C
LETM1_C
STX17_N
DUF5600
RBSN_mid
zf-rbx1
DUF1664
Motif
Other DBs
NCBI-GeneID:
118687472
NCBI-ProteinID:
XP_036240356
UniProt:
A0A7L3V3X3
LinkDB
All DBs
Position
6:24953072..24962355
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLHRSVSVPQSRATVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTSQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGLEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAVHADHLPSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPPDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNRRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILQGDLSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDADTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgagtacgaggactcgctgcaccgctccgtgtccgtgccgcag
agccgcgccaccgtgggcatcccgcactccggatatgtcaacgcacgactggagaaggaa
acaccaatatttaacaagcagaggattgattttgctcctcctgagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttgggaaagacacccttctcaggattgat
cttggaaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagcgaa
tgcctttacctgaacagaagtgttcagaaagtgcgggcactctcccgctggaaaggacac
ttgattgaaagtgtgggctggaacaaatttcttggttcagaaaccaatacagggcctatc
ctggtggggacatcccaggggcagatctatgaggctgaaatctctgtcagcgaaggaagc
ctcttcagcactaaccctgaccagtacttccgacaggtctacactctggaggaggaatct
ggacctgccccagtctgctgcttggaaattgaacgaggtctagaagggaaattttttatt
atagccaccactaggaaaagactctttcagtttgttggcaaagtgcctgaagggacagag
cagcaaggcttcagctctatatttgctgtgcatgctgaccatctgcccagctttcgggag
tttccagccaacctgggtttcagcgagatagccttttacactccgaaactgcgttccaac
ccacgctcctttgcctggatgatgggaaatggtgttctatatggtaccttggattacagt
cgtcctgattcaattctgagtgatgaacgggtctgggtttatcctcctgacattgacata
actgtgaacaagccaatatccattgtgcttacccagttccactttctgttgctgctgcct
gaccgggtgaaggctgtctgcactctgaacggacaggttgtttttcaggatctgttccta
gagaaatttggcttgctgacacgcatgattaaagatcccacagtccagcagatatggatc
cacactgagaaagtggtgttccgctaccatgtccagcgggaatccagagatgtgtggaag
atgtacatgaatatgaacaaatttgatttagcaaaagagtattgtaaggaccgtccagag
tgtcttgacattgtgttggccaaagaggcagagcactgcttccaaaacaggaggtatctg
gacagtgccaaatgttatgcactgacccagaactactttgaggaaattgctctgaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctaagtaaccta
aagccttcggagaagacacagactactctgctgaccacgtggttgacagagctgtacctg
aactggctgggcatattgcaaggagatctctcacagcggaatctctatttggatacacgg
gagaagttccgcactttcctgagcagtcctaaaaacaaggactgtctttttaataatcgg
gcatctatttatgaactgttggcaagccatggcgacacagagcacatggtctactttgca
gtcatcatgcaggattacgagcgtgtagtagctcaccactgccagcatgacgagtacgat
gaggctctaaatgtgctgtccaggcacagagacgagaagctcttctacaagttctctccg
gttcttatccagcatattcccaagaaggtggttgatgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgttaactacagccagagtgccagcacccag
cagatcaatgaagccatcagatatatggagttctgtgtgtaccagctggaggaaacccag
caagccattcacaattacctgttgtctctttatgctttgtgtcggccggactcgttgctg
tcatacctggagcaagcaggaaccaacccaaacaggatccactacgacctgaagtatgca
ctacgcctgtgtgcagagcatgggcaccaccgtgcatgtgtccacatttacaaagtgatg
gaattatatgaggaggctgtggatctcgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatcttcctgaagatgatgaggagctccggaagaagctatggttaaagatcgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gccctgctgaagattgaagatgtgctgccattctttccagactttgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggattacaacaagcacatcgaggagctgaaa
agggagatggaggaagccacgcagagtgccaagaggatccgagaggacatccaggaaatg
agaaataaatatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgccctttttaccttttcctgtgtgggcacatgtttcactacgactgtctcctt
caagcagttttccctaaccttcctgcctataagcaggcaaaacttgaagatcttcagaag
aagctggcagctaccagccagccatccaagagccaccatcgtcccaaggatgcagacacc
attagcttggggaaggggcagcagagccgggaacagatcaaagctgacattgatgacatt
gtggcagctgaatgtgtgtactgtggtgagctgatgatccggtccattgacaagcctttt
attgatccccagaaatacgaagaggagatgcaaagctggctgtaa
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integrated database retrieval system
