Molothrus ater (brown-headed cowbird): 118687872
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Entry
118687872 CDS
T11569
Symbol
CD44
Name
(RefSeq) CD44 antigen
KO
K06256
CD44 antigen
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118687872 (CD44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mate04147
]
118687872 (CD44)
04090 CD molecules [BR:
mate04090
]
118687872 (CD44)
00535 Proteoglycans [BR:
mate00535
]
118687872 (CD44)
00536 Glycosaminoglycan binding proteins [BR:
mate00536
]
118687872 (CD44)
Exosome [BR:
mate04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118687872 (CD44)
Exosomal proteins of other body fluids (saliva and urine)
118687872 (CD44)
Exosomal proteins of colorectal cancer cells
118687872 (CD44)
Exosomal proteins of bladder cancer cells
118687872 (CD44)
CD molecules [BR:
mate04090
]
Proteins
118687872 (CD44)
Proteoglycans [BR:
mate00535
]
Cell surface proteoglycans
Others
118687872 (CD44)
Glycosaminoglycan binding proteins [BR:
mate00536
]
Hyaluronan
Cell surface receptors
118687872 (CD44)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
CD99L2
CR_prot_dom_plant
DUF3377
DotU
TMEM154
Motif
Other DBs
NCBI-GeneID:
118687872
NCBI-ProteinID:
XP_036240949
LinkDB
All DBs
Position
6:19082142..19143117
Genome browser
AA seq
399 aa
AA seq
DB search
MANFSLWTVFGLCLLKLCLAETEFNVSCRYGGVFHVEKNGRYSLTRSEAVELCRALNSTL
ATLEQLKKAHELGFETCRYGFVVGYIVIPRINPYHLCAANNTGIYKLSANTTARYDAYCY
NATETEEKTCEPVVKIDTSLLSNQDETVINNADGSHFNPDGTRHTGGESSTSGVDDENAG
SGSTHETTAMDASISRSSPSYYGSPTPVSQFPGHSSGGSEKGFPGRDYDDEFPSVSPDAS
FGTTAGDFHDEDDGQYPASTSSTSSVYGDQGPHKGHHESTTSPGETATTKIDSQPRSSRV
PDWLIIVVSLVVLALILAVCIAVNSLRRCGQKKKLVINNGKGAVEDRKTSELNGDISKSQ
EMVHLVHKEQSNDRTQACDEFLTVNETQNHHEFDMKTGV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttctccttatggacagtttttggattatgtttgctgaagctctgtctagca
gaaacagaattcaatgtaagttgcagatatggaggagtttttcatgttgaaaaaaatggt
cgctacagtctcacacgatctgaagcagttgaactctgcagagctctcaacagtaccttg
gcaacactagagcagctgaagaaagctcatgagcttggatttgaaacttgcaggtatggt
ttcgtggtgggatatattgttatcccacggatcaatccctatcatctttgtgcagcaaat
aacactggcatttacaaactttcagcaaatacaactgctcggtatgatgcatactgttac
aatgcaacagaaacagaggaaaaaacatgtgagccagttgtaaaaatagatacttcctta
ctcagtaaccaggatgaaacagttattaacaacgcggacggctcccacttcaacccggac
ggcacacgtcacaccggtggagagtcctccacctcaggggtggatgatgaaaatgcaggt
agtggatcaactcatgagacgactgccatggatgcctccatcagcaggtccagcccctcg
tattatggaagtcctactccagtctcacagttcccaggtcattcttctggaggaagtgaa
aaaggatttcctggaagagactatgatgatgaatttccatctgtatcacctgacgcctct
tttgggacgacagctggtgatttccatgacgaagatgatgggcagtatcctgcaagtacc
agctctacctctagtgtatatggtgaccaaggaccacacaagggacatcatgaatccacg
acttcccctggagagaccgccacaacaaaaatagattcacaaccaaggtcgtcccgtgta
ccagactggctgatcattgttgtttctctggtggtgcttgcattgatcctggcagtgtgc
attgctgtcaacagtctcagaagatgtgggcagaagaaaaagctagtgattaacaatggc
aaaggggcagtggaggacaggaagacaagtgaattaaatggagatatcagcaaatcacaa
gaaatggtgcacttggttcataaagaacagtcaaatgaccgaacacaagcatgtgatgaa
ttcctgactgttaatgaaacacaaaatcatcacgagtttgacatgaagactggagtgtaa
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