Molothrus ater (brown-headed cowbird): 118688057
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Entry
118688057 CDS
T11569
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mate03019
]
118688057 (ZC3H13)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
118688057 (ZC3H13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
118688057
NCBI-ProteinID:
XP_036241305
LinkDB
All DBs
Position
2:complement(61868765..61914013)
Genome browser
AA seq
1648 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVEAEPQKRSTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPSPRKSSKSPKRRSSPKSSSSASKKDKKAST
VSSPLLEQQRSSKSTQSKKKGPRTPSPPPPVQEETPLGKKHKEKHKAKERSEEKARDVKE
RGRDFERHKEKKEKQRDPSESSRRQKRSPSPADHSGSNSSPSREYSPPAARRKQTSRAPA
KSTTHKHNFSPSRRSASPSGQHHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQR
TASPPARRSSSPYPPHSSSPPQRKRSPSRHRSPARDKGRHDRDRTSQSHDRRHERRDETR
GKREKERETRDDRDYDQEQSTSRDHRDDRESRDGRDRRDTRDTRDRREPRESRDTRDSRD
TRDYSRDTKDSRDQRDSRSTRDSHDYRDRESRDAHKKDDQYQDDLRSYGRSHGREESSRA
ETRNDSRSDSRNESRSDRIGRSRGRGPELSDKGSRGTRGSQADGHSSSGNYHDSWESRSS
YADRDRYDSRDQARDSSFERRHSERDRRDNRERDQRASSPVRHQGRSDDLERDERREERR
VDRSDDRRDERARERERERERDRERERERDREREREKERELERDRARERERDRERDKDRE
RERDRDRDHDREREREREREKEREREREERERERERERDRERERERERGRDRDKERDRQR
DWDDKEKGREERRDKREDIREERGSRDVHEERKSKKRHRNESSPSPRQSPKRRRDHSPDS
DAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHVTEERQSRWKEEERKSDRKESSRRYEEP
EFKDRVSSADKQREQPDASEGSRSRVQENLGHRPSEERDASDRMHDDSKKKSKIQKKATK
KKKDDDSGVERYTNEPATEESQVFSPKKGQKRKNVEKKRKRSKGDSEVSDEEIVPHHKKK
KGPRTPPVTKEELVEAPPEKAVAEAPTKREDTTFSDWSDEDVPERGDIVVPERTTDDSHR
KSHRTRVEKVEAPHVTIEDGPHRKPVDQKRSSSLGSNRSHASSRLRSPSNESAHRSGDDQ
TARKRILHSSSRDRDRDRDREKKSLEITERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRR
SSPESDRQVHSRSGSFDSRERLQERDRHDHDRERERDRREGRQRDWDRDVDKDWPRSRER
DRLRERERDREKRRELERERDRQLPDPAERERERTLDISSQKESTKHSETKLDRDHEKEF
DGACRDSAASEKEKTDKDLGPSQGFEDGNEAEKVESLEGGEDEAKTNDVQSLGSGAGEYE
PISDDELDEILAGDAEKREDQQEDEKMPGKNPVDVIDVDWSSLMPKQPKEPREPGAALLK
FTPGAVMLRVGISKRLAGPELFTKIKETCQRVLEKPKDAENLFEHELGALNMAALRRKEE
RAGLLSNLGPCCKALCFRRDSAIRKQLMKNEKGATKQTYTNSAAMDSDLLRLSLRLFKRK
TVCQVPGQEKTEDSKIPQPALQQEVCVT
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagaccatatccgatagcaca
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcagttatagaaggtcaccagaaaga
cccactggagatcttcgggaaagaatgaagaacaaacgtcaagatgttgaggcagagccc
cagaaacgaagtacagaggaatcatcctctcctgttaggaaagagtcctcacgaggaaga
catagagaaaaggaggatatcaaaattacaaaggagcgaacaccagaaagcgaagaggaa
aatggggattgggaaacaaatagagaagactctgataatggagatgttaattatgattat
gatcatgagctgtctttggaaatgaagcgccaaaagattcagagagaactcatgaaattg
gaacaggaaaacatggagaaacgagaggaaatagtaattaaaaaagagatttctccagag
gtggttagatctaaattatcaccatcaccatcaccacgaaagtccagcaaatctccaaaa
cgaagatccagtcccaaatcatcatcttcagctagtaagaaagacaagaaagcatctact
gtctcttcaccacttttggagcagcagaggagttctaaaagtactcagagtaaaaagaaa
ggtcctcgtacccctagccctcctcctccagtacaagaggaaactcccctggggaaaaaa
cacaaggaaaaacataaagcaaaagaacgttcagaagaaaaggcaagggacgtgaaagag
agagggcgtgactttgaaaggcacaaggagaaaaaagagaagcagagggatccatctgaa
agctcccgtagacagaaacgttctcctagtcctgcagatcactctggcagcaattcttcc
ccttccagggagtactcaccacctgctgcaaggcgaaagcaaacctcccgagctccagcc
aagtcaaccacccacaaacataacttctctccctcgcgcaggtctgcttctccatcaggt
cagcatcattctcccatatcctccagacatcactcctcgtcctcacagtcaggctcctct
gttcaaagacattctccttccccacaccgcaaaaggactccttctccatcctatcaaagg
acagcctccccgcctgcaaggcggtcgtcttccccctatcccccacactcttcctctcca
cctcagaggaagcgaagtccttcgagacaccgctctcctgcaagagacaagggaaggcac
gatcgcgatcggacttcacagtctcatgaccggcgccacgaaaggcgggacgaaacaaga
gggaaaagagaaaaagaaagagaaacaagagatgatcgtgactatgaccaagagcagagt
acctccagggaccacagggatgacagagagtctcgtgatggaagagaccggagggacacg
agagacaccagagatcggcgggagccgcgggaatccagagatactcgagactccagagac
acgcgggattatagcagggacaccaaggacagtcgtgaccagagggactcacgctccacg
cgagactcccatgactacagggacagagagagtcgagatgcccataaaaaggatgaccag
tatcaggatgacttgcgtagctatgggagatcccatggcagagaggagagctctcgtgct
gaaacgaggaatgactccagaagtgactccagaaatgagagcagaagtgatagaattggc
agaagtcgaggccgaggtccagaattatctgacaaaggaagtcgggggactagaggatcc
caggctgatggtcacagcagtagtgggaactaccacgacagctgggaatcgaggagtagc
tacgctgatcgggatcgctatgacagtcgggatcaagcaagggactcctcctttgagaga
agacacagtgaacgggataggcgtgacaacagagaaagagatcagagagcaagctcaccg
gtacggcatcaaggacggagtgatgatctcgagcgggatgagaggagagaggagcgaagg
gttgatcggtctgatgacaggagagatgaaagggcccgggagagagagcgggaaagggag
agggaccgagagagagaaagagaaagagaccgggaaagagagagggagaaagagagagag
ttggaacgagatcgtgctcgggaacgggagagggacagagagcgggacaaagacagggag
cgtgagcgggaccgagacagagaccacgacagggaaagggaacgagagagggagagggag
aaggagcgggagcgagagcgggaggaacgagaaagggagcgagaacgagagagagatcgg
gagcgggagcgcgaaagggagagaggtcgagacagagacaaagagagagaccgccagaga
gactgggacgacaaagaaaaaggaagggaagaacgcagggataagagagaagatattcga
gaagaaagaggctcaagagatgtccatgaggaaagaaaatccaagaagcgtcacagaaac
gaaagcagtccaagtccccgtcaatcacccaaacgtcgccgtgatcattctcctgatagt
gatgcctacaacagtggagatgataaaaatgaaaagcacagactcctgagccaggttgtg
cggccgcaggaatcccggtcactgagcccctctcacgtcacggaggagcggcagagtcgc
tggaaagaagaagagcgaaaatcggacagaaaggaaagttcccgacgctatgaagaacca
gagtttaaagacagagtttcttcagcagataagcaaagagagcagccagatgcttcagaa
ggttcccggtccagggttcaggaaaatcttggacaccgtccttctgaagaaagagatgct
tctgatagaatgcatgatgacagcaagaagaaatctaaaatacagaaaaaggccacaaag
aagaagaaagatgatgacagtggggtggaaaggtacactaatgaaccagcaaccgaggaa
agccaggtcttttcccctaagaaaggtcaaaaaaggaaaaatgtggagaaaaagcggaag
agatctaagggtgattctgaagtttctgatgaagaaattgttccacatcataaaaagaaa
aaaggcccaagaacccctcctgtaactaaagaagaactggttgaagcaccacctgagaaa
gcagtggcagaagcccccacgaagagagaagatacaacatttagtgactggtcagatgaa
gatgttcctgaacgtggtgacattgttgttccagaaagaaccactgacgattcccacaga
aaaagtcacaggacgagggtagaaaaggtggaagcccctcatgttactatagaggatgga
ccacaccgtaagcctgtggaccagaagcgcagcagcagcctcggcagcaatcggagccat
gcctccagcaggctcagatccccctccaatgagtcagcgcatcgcagtggagacgatcag
actgcacggaagaggatcctgcacagtagctctagggacagggatagggatagggacagg
gagaagaagagcttagaaatcactgaaagaaagtcccgaattgatcagctgaaacgaggg
gaacccagtcgcagcacatcttcagatcgtcaagattcaagaagccacagctcaagaaga
agttcccctgagtcagatcgtcaggttcattccagatccgggtcctttgacagcagggaa
aggctccaggagcgagatcgacatgaccacgatcgagagcgagagagagacaggagagag
gggagacaaagggactgggaccgagatgtggacaaggactggccaaggagccgggagcga
gacagactcagggagcgagagagggatagggagaaaagacgggagctggagagagagagg
gaccgacagctgcctgatcctgctgaaagggagagagagagaactcttgacatctcctct
caaaaggaatcaacaaagcacagtgaaacaaaactggacagggatcatgaaaaggagttt
gatggtgcttgccgggactcagcagcttcagagaaggagaaaacagacaaagatttagga
ccttcacaaggctttgaagatggaaatgaggccgaaaaggtagaaagtctagaaggagga
gaggatgaggcaaagactaatgatgtgcagtcactggggtctggtgctggagaatacgag
cctatcagtgatgatgaactggatgaaattctggcaggtgatgctgaaaagcgtgaggat
caacaggaggatgagaagatgcctggtaaaaatccagtggatgttatagatgtagactgg
tccagtcttatgccaaagcagccaaaagaaccacgtgagcctggggctgcactcttaaaa
ttcacaccaggtgctgttatgttgagagttggcatttccaagcgattggcaggaccagag
ctcttcaccaaaataaaagagacatgccagagagtgttggaaaaacctaaagatgcagaa
aacctttttgagcacgaactgggagcactgaacatggctgcgcttcggcggaaagaagag
agagcaggtcttctcagcaatctgggtccttgctgcaaagcgctctgcttccgccgggac
tctgcaattcggaagcagctcatgaagaatgagaagggtgcaacaaaacaaacttacaca
aattctgcagcaatggacagcgacttgttacggttgagtctacggttattcaaacgaaag
actgtgtgccaggttcctgggcaggaaaagacagaggacagcaaaattccacagccagct
ctccagcaggaagtgtgtgtgacttga
DBGET
integrated database retrieval system
