Molothrus ater (brown-headed cowbird): 118688071
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Entry
118688071 CDS
T11569
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mate03036
]
118688071 (JMJD1C)
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
118688071 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
118688071
NCBI-ProteinID:
XP_036241291
LinkDB
All DBs
Position
8:6033524..6193268
Genome browser
AA seq
2525 aa
AA seq
DB search
MAVETRPELVGKRFLCLGGEEPPESGRWRAGVIRAVSQRDSHSPDLAVYVEFDDLEWEKR
EWVKVYEDFAAFLVEYQLVWAKRKDPSQTQGSKIKQIQWPALTFKPLVGKSVYNSITAVE
FLVDKQLDFVTEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKAWVKEQKVQEIFMQGPYSL
NGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTFLDDVVHS
LLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQAAAPRQNSHQQQRNTRP
NKRKGSDSSMPDEEKMKDERYDYIGRGENPKTKNKHFLNKRRKPEEDEKKLNVKRLRTDN
ISDYSESSDSEISNKRLTDSSSEQNSENELKSKNSSKINGEEGKSQTTEGVEQTLTDRQS
PWDEVQQDKNHEETERLKSSVLDHQEKSSLHAAEQPPLYEQNAKDPPVQECNAEKHHTVE
LKNEQFLPRPPTPKCAVDVTNKNNSEKENQDNAASTFGLQTVQKIESHSSDLKQQFANAN
FLEARKQEADQSWVSSVGKTDLIQPGVVKTLPVNEHLNSEKVQYGSFMSPLNVASLAEES
KLRKQSPVPDSVKSKSSASVDHPKTKSPDVKPKFTQSSDTVKSKVSSQNSHATGLTRSAN
KTDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQETGTNHISPYLHQ
HNYPLHSSSHRTCLNPNAHHPALTGSSHLLAGSSAQAPLSAINPHPLSSASHHSVHHPHL
LPAVLPGVPAASLLGAHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLLGQAHPSASYN
QLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPSPWLHQPTPVTSAD
SLGLRSHIPVRPSSADPLRPLKLTTHSSPPLSKSIVEHRKEELERKAFAEPLRSVTTAPV
KSELEQSRTQTAKESHMHRHYADPMLNQLPRPPQETGERLSKYKEEHRRILQESIEVAPF
TAKIKALEGERENYSRVTSLSSSPKSHSAKYDKDAERSVSELYKMKHSVPQNLPQSNYFT
TLSNSVVNEPPRSYPSKEASGVYVDKQTNCPSTAASAQALPSYISSLSKPPPLIKHQPES
EGSASKIPEQLSQSAQSHAVNSFRSDSRSPTQLSVSSSNTLRSMPALHRAPVFHPPVHQN
LEKKESSYSSLSPPTLTPVQPVNAGAGKIQELQKPPTLVPEPKEAQTVYKGTSEQNLSEM
WKSNNAPNNEKVDWHTERMSGKSQSATASVIVRPPSSTKYENVPVMQSASKDRVSERSSA
VTNPADCLKTAEARETGRVILPNVNSDSARTQYEKKFAAVSQGSIPRAVTPTTTIICSST
KTDVTASAAVTTSVSSRGSSAVTDSVSSAVSCAPLESAAPRAAGQGQGQAQPQECKVSTA
APVTSAAGSAAQPSSAFSTSTDFVHLKKHKAALAAAQFKSSNAAEAESNSVKNQTFSTSL
SPDSAIVCNTINKANSVGSGQTSQTSQPNYHTKLKKAWLTRHSEEDKNTNKKDNSGNSVS
EIIKPCTVNLIASTSNDLQNNIDSKILADKFVKEDKHPRRKGKRTYESGSESGDSDESES
KSEQRTKRQPKPTYKKKQNDLQKKKGDTEEEVKPNGVLSRSAKEKSKLKLQSGSNSTGIP
RSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEEPTHSPVFCRFY
YFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKYILDIIGDKFCQ
LVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAK
ERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNIREKFEIKSHCQC
TTKQNTQAGKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQKSETNGNTSPRSDVS
TDSKLTPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEGKDQDNLESPNCKSSPP
SSQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASGKSGRTMPNILDDIIAS
VVENKIPPNRAPKINVKSEIKEEPKDDKKSIQDDCSKRYSDIQYSWICDKHVLWLRDHKN
TNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILNCKDSIISNTNV
KEFWDGFEDVSKRQKVKNGETALLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCSPEG
KLNLASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVNILVYVGIAKGN
GVLSKSGVLKKLEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREFLQKIAKEQGL
EVLPEHDPIRDQSWYVNKKLRQRLFEEYGVKTCTVIQFLGDAIILPAGALHQVQNFHSCV
QVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRALKIHEGEME
DMDEN
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctgtgcctcggcggcgag
gaaccgccggagagcgggcgctggcgggctggggtcatccgcgccgtgtcccagcgggac
tcgcacagccccgacctggcggtgtatgtggaatttgatgaccttgaatgggaaaagcga
gaatgggttaaagtttatgaagattttgcagccttcttggtggagtaccagctggtctgg
gcaaaaagaaaggacccaagccagactcagggatcaaaaatcaaacaaattcaatggcct
gcattgacattcaagcccttggttggaaaaagtgtatacaattcaattactgcagtagaa
ttccttgtggacaaacagctggatttcgtaactgaagatagtgcctttcagccctatcag
gacgacgtagacagtctaaacccagttctcagggataacccgcagttacatgaggaggta
aaagcctgggtaaaggaacaaaaggttcaggagatttttatgcaaggtccgtactcctta
aatggttatagggtgagagtgtacagacaggattctgccacccagtggttcactggcatc
atcactcaccatgatctcttcacccgcactatggtggttatgaatgaccaggtgttagaa
cctcagaatgttgatccttctatggttcagatgacctttctagatgatgttgttcactct
ttgttgaaaggtgaaaatattggaatcacttcacgccgacggtctcgttccaaccagaac
agcaacacagttcacggtcattatacacgtgcacaagcaaatagtcccagaccagcaatg
aactcccaagctgcagcaccaagacagaattctcaccagcaacagaggaatactcggcca
aataagaggaaaggctctgatagcagcatgcctgatgaagagaagatgaaagatgaaaga
tatgattatataggtcgaggagaaaaccccaagaccaaaaataaacactttcttaataaa
agaagaaaacctgaagaagatgaaaaaaaactaaatgtgaagagactgcggacagacaac
atctcagattattctgagagcagtgactcggagatttcaaataaaagattaacagattca
tcctcggagcaaaattcagaaaatgagttaaaaagcaagaactcttcaaagataaatgga
gaagaaggaaaatcccaaactactgagggagtagaacaaacactaacagatagacagtct
ccatgggatgaggtgcagcaggataaaaaccatgaagagacagaaagactgaagtcatcg
gtcttggatcatcaggaaaaatcttcgctccatgcagcggagcagccaccactttatgag
cagaatgccaaggatccacctgttcaagagtgtaatgcagaaaaacatcatactgtggag
ttgaaaaatgagcagtttttacccaggcctcctactcctaagtgtgctgttgatgttact
aataaaaacaactctgaaaaggagaaccaggataatgctgcaagtacctttggtttgcaa
acagttcagaaaatagaatctcacagcagtgatttaaagcagcaatttgcaaatgcaaat
ttccttgaagcaagaaaacaggaagccgatcaaagttgggttagcagtgttggtaaaacg
gatttgatacaacctggggttgtaaaaacattaccagtaaatgaacacttaaattctgaa
aaagtgcagtatggctcatttatgtctccgttaaacgtagcttctctagcagaagagagt
aaactgcgtaaacaaagtcccgtccccgattctgtgaagtcaaaatctagtgcttcagtt
gatcatcctaaaacaaagtcacctgatgttaagcctaaattcacccaatcttccgatact
gtgaagtcgaaggttagttcccaaaacagccatgctactggattaacaaggtcagccaat
aaaactgatcatgatttgcctaggtctagttttcatccggttccagctagagttagtgct
ctagaagctactaagagtcctcttatcattgacaagaatgaacatttcacagtatacagg
gaccccactctgattggacaagaaacaggaactaatcacatttcaccttacttgcatcag
cataattatcctctgcattcctcatcccaccgaacctgtttaaatccaaacgcacatcat
cctgcattaactggttcatcccatctgctcgctgggtcttcagctcaggctcccttgtcc
gctattaaccctcacccccttagcagcgcatcccaccattctgttcatcaccctcatcta
cttcccgcagtgctgcccggagtgcctgctgcctccctgctgggcgcccacccgcgacta
gagactgctcatgctagcagcttaagccatttggcattagcacaccagcagcagcaacag
atgttacaacaccagtctccacatcttctcggacaagctcatccttctgcttcctataat
cagctagggctttatccaattatttggcagtatccaaatggaacacatgcttactcagga
ctcggtctgccctcctccaaatgggtccacccagaaactcctgttaacgcggaggcttcc
ttgagaaggaatactcccagcccctggttacaccagcccaccccagtgacctcagctgac
agccttggtttacggagtcacattcctgtgcgaccgtccagtgcagatcccctccggcct
ctcaagctgaccacgcattccagcccgcctctgtccaaaagcatcgtagagcatcgcaaa
gaagagctggagaggaaagcttttgctgaacctttgcgttctgtcaccactgcgccagtg
aagagtgagctggagcagagcagaacacagacagcaaaggagagccatatgcacagacat
tatgcagatccaatgttgaaccagctgccaaggccaccacaggagactggggagcgactg
agcaaatacaaagaggaacacaggcggattctccaagaaagtattgaagttgctcctttt
acagctaaaataaaggcactggagggagagagagagaactactccagggtaacatcctta
tcttcaagtcccaaaagccattcagcaaaatacgacaaagatgctgaacgctctgtgtca
gaactgtacaaaatgaaacattcagttccacagaatttgccacagagtaactatttcact
accttgtctaacagtgtagtaaatgagccaccaagatcgtacccatcaaaggaagcttca
ggtgtatatgttgataagcaaactaattgtccttcaacagcagctagtgcccaggctctc
ccctcctacatttcttcactttcaaaaccgccacctttaattaagcaccaaccggaaagc
gaaggctctgcaagcaagatacccgagcagctttcacagtcagcgcagtctcacgctgta
aattctttcagaagtgacagcaggagccctactcagttgtcagtctcatcttcaaataca
ctccggagtatgcctgccttgcatagggcccctgtgtttcaccctcctgtgcaccagaac
ctggagaagaaggagagcagctacagcagcctttcacctccaactctaactcctgttcaa
cccgttaatgctggtgctggcaaaatacaggaattgcagaaaccgccaactttagtacct
gagcccaaggaagcccaaactgtttacaagggcacttctgagcagaatttatcagaaatg
tggaagtctaataatgccccaaataatgaaaaagtggattggcacaccgaaagaatgagt
ggaaagtcgcagtccgctacagcgtctgttattgtgcgtcctccttctagcacaaaatat
gagaatgtaccagtaatgcagtctgcttccaaagatcgagttagtgagagatcctcagct
gtgacaaatccagcagattgcctgaaaacagcggaagccagggagactggaagagtcata
ctgccaaatgtgaactcagacagcgctcgcacacagtatgaaaagaaatttgcagctgtc
tcgcagggcagcattcctcgtgctgtcactcctaccacaactatcatctgcagcagcacc
aaaacggatgtcactgcgtcggcagcagtgaccaccagcgtgtcgagccggggcagctct
gcagtgacggactcggtgtcgagcgcggtgtcctgcgcgcccctggagagcgcggccccg
agggcggccggccagggccagggccaggcgcagccccaggagtgcaaggtcagcactgca
gctccggttacatccgctgctggcagcgctgctcagcccagctcggcgttctccacctct
accgactttgttcatttgaaaaagcacaaggcagcgttggccgcagctcagtttaaaagt
agcaatgctgctgaggctgagtccaactctgtgaaaaatcagacattttcaacctctctc
tccccagacagtgctatcgtctgtaatacaataaacaaagcgaactctgtaggcagtggg
caaacttcccagacgagtcagccaaactaccacactaaactgaaaaaggcttggctaaca
aggcattcagaggaagataaaaacactaataaaaaagataattcagggaacagtgtttca
gaaattattaagccctgtactgtcaatttaatagcttctacatcaaatgatttgcaaaat
aacatagatagcaaaattttggcagataagtttgtgaaggaagataagcacccaaggaga
aaaggaaaacgaacgtacgagtctggctctgaaagtggtgactctgatgaaagcgagagc
aagtcagagcaaaggactaaacggcagcccaagccaacttacaaaaagaaacaaaatgat
ttgcagaaaaaaaagggtgataccgaggaagaagtgaaaccaaatggtgttcttagcagg
agcgccaaagaaaaaagcaagctgaagttacagagcggcagtaacagcactgggatacct
cgctccgtgttaaaggactggcgcaaagtaaagaagctgaagcaaacgggagagtccttt
ttgcaggatgattcttgttctgaaataggaccaaatctacaaaagtgtagagaatgtagg
ttaataagaagtaagaaaggagaagaacccactcactcaccagtattttgtagattttac
tactttaggaggttgtcttttagtaagaatggagtggttaggatagatggtttctcctct
cctgatcaatatgacgatgaagcgctgagtttatggacacatgaaaactacgaagatgat
gaactggacctagaaacttctaaatacattctagatatcataggggataaattttgtcag
ttggtaacctctgagaaaacagccatgtcctgggtgaaaaaagacgccaaaattgcatgg
aagagagcagtgagaggagtccgtgagatgtgtgatgcatgtgaagccacattatttaac
attcattgggtctgccaaaaatgtggatttgtggtctgcctagattgttacaaagcaaag
gaaaggaaaagttctagagataaggagttgtatgcctggatgaagtgtgtgaagggacag
cctcatgaccacaagcacctgatgccaacacagattattccaggctctgttttgacagat
cttttagatgctatgcacaatattagagaaaaatttgaaattaaatcccattgtcagtgc
accaccaagcagaacacacaagctgggaagctccctgcaatgaatggtgtgtctcaggtt
ttgcagaatgtccttaaccacagtaataaaatttctctgtgtatgcctgagtctcaacag
cagaatactcctcaaaagtctgagacaaatggtaacacaagtccaaggagtgatgtgagc
acagacagcaagttaacaccacctgaatcccagtccccactgcattggctggctgatctt
gcagagcagaaagccagagaagaaaaaaaagagaacaaagaatgtccttctggaaaacat
tcgaaggaagggaaggatcaggataatttggagtccccaaactgtaaaagttctcctcct
tcatcccagaacaacgagcagggctcaaccttacgagatctgttaactacaacagcaggc
aaactgcgtctgggctctacagatgctggcattgcttttgctccagtgtactctacagga
acagcaagtggcaagagtggaaggactatgccaaacattcttgatgatataattgcttca
gtagtagaaaacaagattccaccaaatagagcaccaaagataaatgtaaaatctgaaata
aaagaagagccaaaggatgataaaaaaagcattcaggatgactgcagtaaacggtacagt
gatatccagtattcgtggatctgtgacaagcatgttctgtggctcagagatcataaaaac
accaacaactggaaactcttcaaagagtgctggaaacaaggaaggcctgttttggtgtct
ggtatgcataagaaaatgaacttcagcctatggaaagctgagtcaatcagtctggatttt
ggaaaccagcaagcagatatcttgaattgcaaggacagtatcatttcaaacaccaatgtc
aaggagttctgggatggttttgaagatgtttcaaaacggcagaaagtaaaaaatggagaa
acagctctgctaaaactgaaagactggccttctggtgaagatttcaaaaccatgatgcca
gcaagatatgaggacttactaaaaagtttacccttgcctgaatattgtagtccagaagga
aaactaaacttggcttctcatctgccaggattttttgtccggccagatttgggacccaga
ctgtgcagtgcatatggtgtggctgctactaaagaccatgacataggaaccacaaatctc
catattgaagtttctgatgtcgtgaacatccttgtttatgttggcatagccaaaggaaat
ggagtactttccaaatcaggagttttgaagaagttggaagaggaagatttggatgacctt
ttaaggaagaggttgaaagattcaagtgaattacctggtgctttgtggcacatttatgct
ggcaaagatgctgacaagataagagagtttctgcaaaagatagcaaaggagcaaggcctg
gaggttttaccagagcacgatccaatccgtgatcagagttggtatgtgaacaaaaaactt
cgccaaagactttttgaagaatacggagtaaaaacctgcacagttattcagttccttggt
gatgctattattctaccagcaggagcacttcatcaggtgcaaaattttcacagctgcgtt
caagtaacggaagactttgtgtctccagaacatcttgtacagtcatttcacctaacgcag
gagctgaggctgtcaaaggaagaaatcaattatgatgataaactgcaggttaaaaatatc
ttgtatcacgcagttaaagaaatggtgagagctttgaagattcacgaaggtgaaatggaa
gatatggatgagaactga
DBGET
integrated database retrieval system
