Molothrus ater (brown-headed cowbird): 118688341
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Entry
118688341 CDS
T11569
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mate04040
]
118688341 (TRPC4)
Ion channels [BR:
mate04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118688341 (TRPC4)
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
118688341
NCBI-ProteinID:
XP_036241738
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Position
2:65606126..65738182
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AA seq
975 aa
AA seq
DB search
MAQFYYKRSVNAPYRDRIPLRIVRAESELSHSEKAYLNAVEKGDYASVKKALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPVLLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVVIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLSMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLVPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEPGNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWLWRHLCKKKIRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLSNLQTGKMSKDTASLSENEEN
SESEGNKKGKKKPFSLFDITTMIHPRSASIASEGHNVSNGSAMMVSESTQEKQKRVNFVT
DIKNFGLFHRRSKTNSVEQSKNKIYTVSEEVSRQQAEEQCEKTDELEEGELIMNCELNFQ
SPGKKCVLAESQNTSESLDSHEEGSICPSETEKMELQSSEPATPQDQLGKALDISIDSDG
KQETIVQGDYVITRL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctactacaaaagaagtgtcaatgctccctacagagaccgaatccctctt
cgcattgtgcgggcagaatccgaactgtctcattcagagaaggcctacctgaatgccgtg
gagaaaggagattatgccagtgtaaagaaagccttggaggaggcagaaatttatttcaag
atcaatattaactgcattgatcccctgggcagaactgcactcctaattgcaattgaaaat
gagaaccttgagctcattgagctgctcttaagttttaacgtgtatgtgggagatgctctg
ttgcatgccatacggaaggaggtggttggagccgtggagctgctgttaaatcacaagaaa
cccagtggagagaagcaggtgccaccagtgcttctggacaagcagttttcagaatttaca
ccggatatcacacctattattctggctgcccacaccaacaactatgaaatcataaagctc
ctggtgcagaagggggtgtctgtgcccaggccacacgaggtgcgctgtaactgtgtcgaa
tgtgtctcaagctcagatgtggacagcctccgccactctcgctccagactcaatatctac
aaggctctggcgagcccatcattgattgctttatccagtgaggatcctttccttactgct
tttcaactgagctgggagctgcaggaactgagtaaagtcgaaaatgagtttaagtcagag
tatgaggaactgtcacggcaatgcaagcaatttgcaaaagatctcctggatcagacacgg
agttccagggaattggaaattattcttaattacagagatgataatagcttgatagaagaa
caaagtggtaatgatcttgcaagattgaaactggcaattaagtaccgtcaaaaagagttt
gttgctcagcccaactgccagcagctgctcgcatcccgctggtacgacgagttccctgga
tggcggaggcgacactgggcagtgaagatgttgacatgtgttgtgataggactccttttc
ccagtcttctctgtgtgctacctgatagctcccaaaagcccattggggctgttcatcaga
aagccatttatcaaatttatctgccatacagcatcatacttgacttttctgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacctcagcatgcagggaccccctccaacc
atcgtcgagtggatgattttaccgtgggtcctgggttttatctggggtgaaattaaacag
atgtgggatggtggactacaggactacattcatgattggtggaacctcatggattttgta
atgaactccttgtacttggcaacaatctccttgaaaattgttgcattttcaaagtacagt
gggttagttccacgggagagctgggacatgtggcatccaaccctggtggctgaggccctg
tttgcaatcgcaaacatcttcagctccctgcgcttgatctcattattcactgcaaattct
cacctgggacctctgcagatatctctaggaagaatgttgctggacattttgaagtttctc
ttcatatactgccttgtgctgcttgcttttgcaaatggattgaaccagctgtacttctac
tatgagacaaatgaacctggcaactgcaaaggaatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgaaacgctgcagtcattattctggtctatatttggactcatcaat
ctctatgtgaccaatgtgaaagcaaggcatgaattcactgaatttgttggggccaccatg
tttggtacctataatgtaatatctctggttgttctactcaacatgctaatagccatgatg
aataactcttatcaactcattgctgatcatgcagacattgagtggaaatttgctcgaaca
aaactctggatgagttactttgaagaaggaggaactttgcccactccttttaatgtcata
ccaagcccaaagtctttgtggtatctgatcaaatggttatggagacacctttgcaagaaa
aaaattagaagaaagcctgaaagttttggaacaatagggagacgtgcagctgacaatttg
aggagacatcatcaataccaggaagttatgagaaatctggttaaaaggtatgttgcagca
atgataagagatgccaaaactgaggaaggattgacagaagaaaattttaaggagttaaaa
caagatatttccagctttcgctttgaagtcctgggtttattaaaaggaagcaagctgtct
aatttgcagactggaaagatgagcaaagacactgcctctctgtcagaaaatgaagaaaat
agtgagagtgaaggaaacaagaaaggaaagaagaaacccttcagcctttttgacataaca
acgatgattcacccacgatcagccagtatcgcctctgaaggacataatgtaagcaatggc
tcagcaatgatggtgtcagagtccactcaggagaaacaaaagcgtgtgaattttgtaaca
gacataaaaaattttgggttgtttcacagacgatcaaaaacaaactctgtggagcagagt
aaaaataaaatatacaccgtttctgaagaagtttcccgccaacaggcagaagaacaatgt
gagaaaactgatgaactggaagagggagaattgatcatgaactgtgaattaaacttccaa
agtcctggcaaaaaatgtgtgttagctgagtcacaaaacaccagcgagtctttggattca
cacgaagaggggagtatttgtccttcagaaacagagaaaatggagttacagagctcagaa
cctgccactccacaggatcagctgggcaaggctttggacattagcattgactctgatggg
aaacaggaaacaattgttcagggggactatgtgataacgaggttgtga
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