Molothrus ater (brown-headed cowbird): 118689253
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Entry
118689253 CDS
T11569
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
KO
K11101
patched 2
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118689253 (PTCH2)
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Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
118689253
NCBI-ProteinID:
XP_036243263
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All DBs
Position
9:complement(21379240..21400740)
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AA seq
1427 aa
AA seq
DB search
MGAAAAAAANGSGGGGAAPAPPAPXLPFRGAAGGRRRTHCPPSAPAPAPARPRRAHGGRR
RARPHITGVPSPASRPAMPAEPPRAAPPPLRAARRKPLPEGRAVGQRTPLWLRARFQALL
FALGCRIQRHCGKVLFVGLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKL
GEESVYTSQMLIQTPKKEGDNILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSG
VPIIENGMIERMIEKLFPCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLMEE
LGQFTSLEGFKELLDKAEVGQAYMERPCLDPRDPQCPSSAPNKQSQQSPDIPAELSGGCH
GFSRKFMRWQQELILGGTTKDSQGKLLRAEALQTMFLLMSPRQLYEHFKDDYEIHDISWS
EEKAGAILEAWQRKFVELAQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSVIRVAGGYLL
MLAYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLAL
GIGVDDMFLLAHAFTETSQHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPAL
RAFSLQAAVVVVFNFAMVLFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQEL
ADANDNHACHPSPYGHPGMATSTQITTTVQAFTRCDPSGHHIVTVLPPTSQVCTSPAILL
PHSDPLGSQVFAPSSSTRDLLSQLDEAKGGRECVPLPFCRWSLADFAREKYAPLLLRTRT
KVVVVVLFLALLGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKG
GFHYPGAQAALLSLHQAFSTVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGRI
THDSYRNGSEDGALAYKLLIQTGNKKDPFNFNQLTTRRLVDENGIIPPDTFYICLTVWAS
NDPLGFAASQANFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTSDFVE
AIESVRAICQEAAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLLL
NPWTAGIIVSILAMIAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAA
GSRNVRSAAALEHTFAPVMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGL
VLLPVLLSVIGPPPEASLVDNGPCLPPPESIPPCLGPGGLYVRRAPAWPATFPEPSDTES
VGPGSPRGPFVVPPAPAHILLEAGKDPSFPHITVLKPYKDSLEAQGKKETSGPQPAAPLP
FGEPCTTLPRDPPQPCPAGTRPAPPAALPTYSTHLQGPAGSYTTVTATASVTVALHPTLP
GSYPTFSPEGFTSSERDCLDEPSTSGAAVPDTFEMQNMGHHGAGAWR
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctgccgcggcggcggcggccaatgggagcggcggcggcggcgcggccccggcg
ccccccgcccgcctcccctttagaggcgcggcgggcggccggcggcgcacacactgccct
ccatccgcaccggcaccggcaccggcacggccccgccgcgcgcatgggggccgccgccgc
gctcggccccacataacgggggtgcccagccccgccagccgccccgccatgccggccgag
cccccccgcgccgcgccgccgccgctccgcgccgcccgccgcaagccgctgcccgagggc
agggccgtgggccagaggaccccgctgtggctgcgggcccgctttcaggcgctgctcttc
gccctgggttgccggatccagcggcactgcgggaaggtgctcttcgtggggctgctggtg
ttcggggcgctggccgtgggactacgggtggcctccatcgagaccgacatcgagcacctc
tgggtggaagcgggcagccgggtgagccaggagctgcgctacaccaaggagaagttgggc
gaggagtccgtctacacgtcccagatgttgatccagaccccgaagaaggagggtgataac
atcctgacacaggaggccctgcagctccacctcgaggcggccttggccgccagcaaggtt
caagtctccctgtacggaaaatcgtgggatttgaacaagatctgctacaagtcaggtgtt
cccatcattgagaatggcatgattgagaggatgatagagaagctgttcccctgtgtgatc
ctgacaccgctggactgcttctgggaaggctccaagctgcagggaggctcagcctatctc
ccgggccgcccggacatccagtggagcaacctggaccctctgcagctgatggaggagctg
gggcagttcacatccctggaaggcttcaaagagctgctagacaaggcagaggtgggacag
gcttacatggagcggccctgcctggacccccgggacccccaatgtccctccagtgccccc
aacaagcagagccagcagagccccgacatcccagccgagctctcagggggctgccatggc
ttctccaggaagttcatgcgctggcagcaggagctgattttaggtggcacgaccaaagac
tcccagggcaagctgctacgcgccgaggccctgcagaccatgttcctcctcatgagcccc
cggcagctctatgagcacttcaaagatgactatgagatccatgatatcagctggagcgag
gagaaggcaggagccatcctggaggcctggcagaggaaattcgtggagctggcacaggac
tccatccctcccaacgccacgcagagtgtccatgctttctccaccaccacgctcaacgac
atcatgaagtccttctctgacgtcagcgtcatccgggtggctgggggctacctcctcatg
ctggcctacgcctgtgtcaccatgctgcggtgggactgctccaagtcccaaggggctgtg
ggcctggctggggtcctgcttgtggctctctccgtcgcctctggcctggggctttgctca
ctgctgggcatctccttcaatgcagccaccacccaggtcctgcccttcctggccctcggc
attggggtggatgatatgttcctcttggctcacgccttcaccgagacaagccagcacatc
cccttcaaggagcggacaggtgagtgtctgaagcgcacggggaccagtgtggctctcacc
tctgtcagcaacatgatcgccttcttcatggcagccctggtgcccatccctgccctgcgc
gccttctccctccaggctgcagtggttgttgtgttcaacttcgccatggtgctctttgtt
ttccctgccatcctgagcctggacctgcaccgccgggagaaacgccggctcgacatcctc
tgctgcttctacagcccttgctcctcaagggtcatccagatccagccccaagagcttgct
gacgccaacgacaaccatgcctgccacccgtctccttatgggcaccccggcatggccacc
agcacccagatcaccaccactgtgcaagcctttacccggtgtgacccttcgggccaccac
attgtcaccgtcctgccacccacctcccaggtgtgcacctcacctgccatcctcctgccc
cacagtgaccccttgggctcgcaggtcttcgccccatccagctccacccgggatctgctg
tcccagctggatgaggccaagggtggccgggagtgtgtccccctgcccttctgccgctgg
agcctcgctgatttcgcccgggagaagtacgccccactccttctgcgcacccggaccaag
gtggtggtggtggtgctgttcctggcactgctagggctgagcctctatggcaccaccatg
gtgcatgatggcctctacctgacggacatcgtgccacgggacaccaaggcacacgccttc
atctcggcccagttcaagtacttctccttctacaacatgttcattgtcactaagggtggc
ttccactacccgggtgcccaggctgccctgctgagcctgcaccaggccttcagcactgtc
aagtacgtggtgcgggagggcaaccgcgacctgcctaaaatgtggctccattacttccag
gactggctgagagggctccaggccaccttcgatagggactggcaggccgggcgcatcacc
catgacagctaccgcaatggctccgaggatggggcactggcatacaagctcctcatccag
actggcaacaagaaggaccccttcaacttcaaccagctgaccacgcgacgactggtggat
gagaatggcatcatcccccctgacaccttctacatctgcctgacggtgtgggccagcaac
gaccccctgggctttgccgcctcccaggccaacttctaccccccaccccccgagtggatt
catgacaagtacgacaccacgggcgagaacctgcgaattccagcagcccagccactggag
ttcgcccagttccccttctacctgagcgggctgcgtcgcacatccgacttcgtggaggcg
attgagagcgtacgggccatctgccaggaggctgcccagcgccacggcgtgctgagctac
cccagcggctaccccttcctcttctgggagcagtacatcggcctgcggcactggttcctg
ctggccatcagcatcctgctggcctgcaccttcctggtctgcgccttgctgctgctcaac
ccctggaccgccggcatcatcgtctccatcctggccatgattgctgtggaattgtttggc
atcatggggctgatgggcatcaagctgagcgccatccctgtggtcatcctcattgcctca
gtgggcatcggtgtggagtttactgtccacgtggccctgggcttcctgacagctgcaggg
agcaggaatgtgcgctcagccgcagcactggagcacacttttgcgcctgtgatggatggt
gctgtctccaccctcctgggtgtcctcatgctggctggctctgagtttgatttcatcatg
aggtatttctttgcggtgctgaccatcctgacgctgctggggctgctcaacgggctggtg
ctgctgcccgtgctgctctctgtcattgggccaccccctgaggcatccctggtggataat
ggcccctgcctacccccaccagagtcaatacccccatgtctgggccctgggggactgtac
gtccggcgtgctccagcctggcccgccaccttccctgagccctctgacacagagagcgtg
gggccaggcagcccacggggacccttcgttgtgcctcctgccccagcacacatcctactg
gaggctggcaaggaccccagcttcccccacataactgtgctgaagccctacaaggacagc
ctggaggctcaggggaagaaagagacttctggccctcagcctgcagcccccctgcccttc
ggggagccgtgcaccacgctgccccgagatcccccgcagccctgcccagcgggcacccgg
ccagccccccccgcagccctgcccacctacagcacccacctgcagggtcctgctggcagc
tacaccaccgtcacggccactgcgtcagtgacagtggccctgcaccccacactgcccggc
tcctaccccaccttcagccctgagggcttcaccagcagtgagcgggactgcctggacgag
cccagcaccagcggagctgctgtgcccgacacctttgagatgcagaacatgggacaccac
ggggcaggtgcctggcgctag
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