Molothrus ater (brown-headed cowbird): 118689471
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Entry
118689471 CDS
T11569
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118689471 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mate03019
]
118689471 (TPR)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118689471 (TPR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
TPR
Motif
Other DBs
NCBI-GeneID:
118689471
NCBI-ProteinID:
XP_036243674
LinkDB
All DBs
Position
9:6741085..6774426
Genome browser
AA seq
2374 aa
AA seq
DB search
MAAVLQQLLERAELAKLPRAVQGKLERFLGDQQGEIDGLRARHERFKVDSEQQYFEVEKR
LAQSQERLVNETQECQTLREELKKLHEQLKVLNEKNKELEAAQDRNAAMQSQLIREKEEL
EAEKRDLVRTTERRSQEVEHLNEDVKRLNEKLTEANTEKAKLQLKLDELQTSDVSMKYRE
KRLEQEKELLQNQNTWLNAELKAKTDELLHTAREKGNEILELKCSLENKKEEVSRMEEQV
NSLKQSNENLQKHVEELLNKLKEAKEQQTSMEERFHNELNAHMKLSNLYKSAADDSEAKS
NELTGAVEELHKLLKEAGEANKAAQEHLAEVEESKATMEKELREKISKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLHMEKLENRRIN
KYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIHRLQDSADQANKHAS
FFERESQRLEVRVKDLSQQICVLLMELEEARGNHVIRDEAVSSADISSSSEVITQHLVSY
RNIQELQQQNQRLLVALRELGEAREKEEQETTSSKISELQSQLDEALSELQQLRESRQHQ
LQLVESIIRQRDMFRILLTQTTGAIIPLQASGMLPEEICLTSTPKRPNLPQSMATPAPVS
MSESVETVEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTDLRSQNAKISTQL
EFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQDLRGANEKLAVAE
VRAENLKKEKDILKMSDVRLTQQRDSLLVEQRGQNLLLTNLRTIQGILERSETETKQRLN
NQIEKLEREISQLKKKLESEVEQRHSLTKNQEVHILDLKRQLETETNRHINTKELLKNAQ
KENAMLKQQLNNTEAQLTSQSSQRPPGKGQPSTNEDVDDLVSRLRQAEEQVNDLRERLKT
SSSNVEQYRAMVLSLEESLNKEKQVTEEVRTTVEARLKESSEYQAQLEKKLMESEKEKQE
LQEEKCKAVENMEQQLSELKKSLSAVQSEVQEALQRASTALNNEQQARRDCQEQAMMASE
AQNKYERELMLHAADVEALQAIKEQVAKNAAVRQQLEEAAQKAESELLESKASWEERERM
IKDEASKLASRCEDLEKQNRLLHEQLESMSNKMVTSMKEAIPTAANVSLSEEGKSQEQIL
EILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQDSLNAEREKVQVTAKTIA
QHEELMKKTETMNILIETNKMLREEKERLEQELQQIQAKVRKLEADILPLQESNAELSEK
SGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLSEKEANAKRVQQMSEETGR
LKAEVARTNASLTTSQNLVQSLKDEVTKIRTEKDALQKELDAKVADIQEKVKTITQVKKI
GRRYKTQYEELKAQHDKMVAESSTLPLAEPQEDQVSAQEVQELKDTLSQAEVKTKNLETQ
VESLQKTITEKETEVRNLQEQIMQLQTELARFHQDLQEKTTQEEQLRQQITEKEEKTRKT
LLAAKQKIAQLAGTKEQLTKENEEWKQKSSSLEEQKTELEVRMSALKSQYEGRICRLERE
LREQQERHHEQRDEPPESTNKVPEQQRQISLKSTPASGERGIASTSDPPTANIKPTPVVS
TPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVE
HVPVFGSASGSVRSTSPNVQTSLPQPILTVQQQTQATAFVQPTQQSHAQIEPAAQEPAPA
IVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRSREEEEDNTVENSDQISEETVDAPTS
KKLRIMQRVGPEEEVTAEESTDGEVEAQTYNQDSQDSIGEGVTQGEYAAMEDSEETSQSI
PIDLGSLQSDQQNTSSSQDGQSKRDDVIVIDSDDEDDDDEENEGEQEDYDDEEEEDEDDD
EDTGMGDEGDDSNEGTGSADGNDGYEADDAEGADGTDPGTETEESMGGAESNQRAADSQN
SGEGSTSAAESTFAHESLREQQPSSASSERQGPRPPQSPRRPPHPLPPRLTIHAPPQELG
PPVQRIQMTRRQSVGRGLQLTPGIGGMSLFFQQQHFFDDEDRTVPSTPTLVVPHRTDGFA
EAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRS
VPTTPLQVAAPVTVFTESASADASEHASQSVPMVTTSTGSLSTTTEPGAGDDADEVFAEA
ESEGITSEAGLEIDSQQEEESVQASDESDLPSTSQDPPSSSSADTSSTQPKSLRRVRLQP
PTLRTGVRGRQFNRQRGVTHAMGGRGGLNRGNIS
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgctgcagcagctcctggagcgggccgagctcgcgaagctgccccgcgcc
gtgcagggcaagctggagcgcttcctgggcgaccagcagggcgagatcgacgggctgcgg
gcccgccatgagcgcttcaaggtggacagcgagcaacagtactttgaagtggaaaagcga
ctggctcagagccaggaaagacttgtaaatgagacccaggaatgtcaaactctgcgggag
gagctcaaaaagcttcatgagcagctgaaggtgctcaatgagaagaacaaggagctcgag
gctgcccaggaccggaacgcggccatgcagagccagttaattcgagagaaggaagaactg
gaagctgagaagagagacttggtccgaaccactgaaaggcgatctcaggaagttgaacat
ttaaatgaggatgttaaacgtttaaatgaaaagctcacagaggccaacacagaaaaggca
aaacttcagctgaagttggacgagcttcaaacatcagatgtttccatgaagtaccgggag
aaaaggctggagcaagagaaggagctgctgcagaaccagaacacatggctgaatgctgag
ctgaaagctaaaacagatgagctgctccatactgccagggagaaaggcaatgaaatcctg
gagctcaaatgcagtctggagaacaaaaaggaggaggtttccagaatggaggagcaggtg
aacagcttgaaacagtcaaatgaaaacctccagaagcatgttgaagaacttttgaataaa
ctaaaggaggcaaaagagcagcagacaagcatggaagagagattccacaatgaactgaat
gcccacatgaaattatccaacttgtataagagtgctgctgatgactcagaggcaaagagc
aatgagctgacaggagcagtggaagagctgcacaagctcctgaaggaagcaggggaagct
aataaagcagcccaggagcatttggctgaggtggaggagtcaaaagccaccatggagaag
gagctgagagagaagatcagtaagctggagaaggagctggagaatgccaatgatttactg
tcggctacgaagcgcaaaggagccatcctgtccgaggaggagctggcagccatgtctccc
actgctgcagcagtggccaaagtggtcaagcctggcatgaagttaactgagctgtacaat
gcctatgtagaaactcaggatcagttgcatatggagaagctggagaataggagaatcaat
aaatatttggatgaaatagtgcaggaagtagaagccaaagccccaatcttaaaacgtcag
cgtgaagaatttgagcgttcccaaaaagctgttgcgagtctgtctgcaaagcttgaacaa
gctatgaaggagatccatcgcctgcaggacagcgctgaccaggccaacaaacacgcctcc
ttctttgagagggagagccagagactggaggtgcgagtgaaggatctctcccagcagatc
tgtgtgctgttaatggaactggaagaagccagaggcaaccacgtgatccgtgatgaagca
gtgagctctgctgacatcagcagctcttctgaagtgatcactcaacacctggtctcctac
agaaatatccaagagcttcagcagcagaatcagcgtctcctggtggctcttcgggagctg
ggggaggcaagagaaaaagaggagcaagaaacaacatcatctaagatctctgagctgcag
agccagctggatgaggccctcagtgagctgcagcagctgcgggagtcgcggcagcaccag
ctgcagctcgtggagtccatcatccgccagcgggacatgttccgcatcctgctcacccag
accacgggggccatcattcctctgcaagcttcaggtatgttaccagaggagatctgtctt
acatctactccaaagcgcccaaatttacctcagtccatggcaactcctgctccagtgtcc
atgagtgagtctgtggagactgtggaggccaaggctgctcttaagcagttacaagaagtt
tttgagaactataaaaaagaaaaggcagagaacgacaagcttctgaatgagcagaatgaa
aagcttcaggagcaggtcacagacctgaggtcacaaaatgcaaagatatccacacagctg
gaatttgcctccaaacggtacgagatgctgcaggataacgtggaaggctatcgccgggaa
atcacctccctgcacgagagaacccagaaactcacagcgacaactcagaagcaggagcag
atcattaacaccatgactcaggacctgaggggagctaatgaaaaactggcagtggcagag
gtgagagcagaaaacttgaaaaaagagaaggatatcctgaagatgtcagatgtgcgcctg
actcagcaacgtgactctctgctggttgaacaaagaggacagaacttgctgctcaccaat
ttgagaacaattcagggaatacttgagagatctgagacagaaacaaagcagaggctcaat
aatcagatagaaaagcttgaacgtgagatatctcagctgaagaagaaactggaaagtgag
gtggagcaaagacattcccttaccaagaatcaggaggttcatatcctggacctgaagagg
cagctggagacagagaccaaccgtcacatcaacacaaaggagctcctgaagaacgcccag
aaggaaaatgccatgctgaaacagcagctgaacaacactgaggcccagctcacatcccag
tcctcacaaaggcctccagggaaaggtcagcctagtacaaatgaagatgtggatgatctt
gtaagtcgtctgagacaagctgaggagcaagtcaatgacctaagagaaaggctcaagact
agttccagtaatgtggagcagtacagggccatggttcttagcctggaggaatccctcaat
aaggaaaaacaagtgacagaggaagttcgtacaacagttgaagctcgtctgaaggagtct
tcagaatatcaggcacagctggaaaagaagttgatggagtcagaaaaagaaaaacaggaa
ctgcaggaggagaagtgtaaagcagtggagaacatggagcagcagctttcagagctgaag
aagagtctgtcagctgtgcagtcagaagttcaggaagctcttcagagagccagcacagct
ttgaataatgaacaacaggccaggagggactgccaggagcaagcaatgatggcttctgaa
gctcagaacaaatatgagcgggagttgatgcttcatgctgctgatgtggaggcactacag
gccatcaaagagcaagtcgccaagaatgcagctgtgaggcagcagctggaggaggctgct
cagaaagcagagtctgagctcttggaatccaaagcctcctgggaagagagagagagaatg
atcaaggatgaagcttcaaaacttgcatcccgctgtgaggatctggagaaacaaaatcga
ttattacatgagcagctggagagcatgagcaataagatggtgacttccatgaaagaagcc
atcccaactgcagcaaatgtttctctcagtgaggaaggcaaatcccaggaacaaatctta
gaaattcttcggtttatccgtcgggagaaggagattgcggagacgaggtttgaggtggcg
caggtggagagcctgcgataccgccagagagtggagcacctggagagggagctccaggag
ctgcaggacagcctcaacgctgagagggagaaggtgcaggtaacagcaaaaaccattgca
cagcatgaagaattaatgaagaaaactgagaccatgaacatactcatagaaaccaacaag
atgttaagggaagagaaggagaggctggagcaagagctacagcagatacaagcaaaagta
cgcaagctcgaggcagacatcctgcccctgcaagagtccaatgctgagctcagtgagaag
agtggaatgctgcaggcagagaagaagctcttggaagaggatgttaaacgctggaaagcc
cggactcagcacttactgagccagcagaaggacaccgatctggaagagtatcgaaagctg
ctctctgagaaggaggcaaatgccaagcgtgtccagcagatgagtgaagaaacaggcagg
cttaaagcagaagttgccagaactaatgcatccttgactacaagccagaatcttgttcag
agcctgaaggatgaagtaactaaaataagaacagaaaaggacgctttgcagaaagaacta
gatgctaaagtggctgacatacaggaaaaagtgaaaactataacacaggtcaagaaaatc
ggtcgcaggtacaaaactcagtatgaggagctgaaagcacagcatgataagatggttgct
gaatcatcaactctgcctttggcagaaccacaagaagaccaagtttctgcccaggaagta
caagagctaaaagacactctcagtcaagctgaggtgaagacaaagaatttggagactcag
gttgaaagtttacaaaagacaataacagaaaaggaaactgaagttagaaatctccaggag
cagataatgcagctacagacagaactggcccgtttccatcaagatctgcaagagaagact
acacaggaagaacagctcaggcaacagatcacagagaaggaagagaaaacaaggaagacc
ttgcttgcagccaagcagaaaatagcacagttagctggtacaaaagagcagctcacaaag
gagaatgaggagtggaagcagaagagcagctccctggaggagcagaagacggagctggag
gtgcggatgagcgccctgaagtcccagtacgaggggcggatctgccgcctggagagggag
ctccgggagcagcaggagcggcaccacgagcagcgggatgagcccccagagtccacaaac
aaggtcccagaacagcagaggcaaatctcactcaagtctactccagcttcaggtgaaaga
ggaattgccagcacttcagatcctccaacagcaaacattaaaccaactcctgttgtgtca
actcccagtaaagtgactgctgctgcaatggctgggaataagtctactccaagggccagc
atccgtcccatggtgactcctgccacagtcaccaatcccaccactacccccacagccaca
gttatgccaacaacacaggtggagactcaggaagccatgcagtcggaaggacccgtggag
cacgtcccggtgttcggcagtgccagcggctccgtgcgctccaccagccccaacgtgcag
acatccctgccccagcccatcctgactgtgcagcagcagacccaggccactgccttcgtg
cagcccacccagcaaagccacgctcagatcgagcctgcagctcaggagccagcccctgcc
atcgtggaggtggtgcagagctcccagatagagaggccctccacctccacagccgtgttt
ggcacagtttcagctacccccagttcctcactgtctaaacgctcccgagaggaggaggag
gacaacactgtggagaactcagaccagatctctgaggaaacagtggatgcacctacttca
aagaaactgagaatcatgcagagagttgggcctgaggaggaagtgacagcagaagagagc
actgatggagaagtggaggcacaaacatacaatcaagactcacaagattccattggagaa
ggtgtgacacagggggagtacgcggccatggaggacagcgaggagacttcccagtctatc
cctatagacctggggtcccttcagtcagaccaacaaaacacctcttcatctcaggatggc
cagtccaagagagatgatgtgattgtaattgatagtgatgatgaagatgatgatgatgaa
gaaaatgaaggggagcaggaagattatgatgatgaggaagaggaggacgaggatgatgat
gaagacacaggcatgggagatgaaggtgatgacagcaatgaaggaactggtagtgctgat
ggcaatgatggatatgaagcagatgatgctgagggtgctgatggtacagatcctggaaca
gagactgaagagagcatgggaggagctgaaagcaaccagagggcagcagattcccaaaac
agtggagaagggagcacgagtgctgcagagtccacgtttgcccacgagagcctgcgggag
cagcagccgtcatcggcatcgtccgagcgccagggcccgcggcccccgcagtccccaagg
aggcccccgcaccctctgcccccacggctcaccatccacgcccctccccaggagctgggg
cccccagtgcagagaatccagatgactcgaagacagtcggtggggcgagggcttcagctg
acccctgggataggtggaatgtctctttttttccagcagcagcacttctttgatgatgag
gacaggacagttccaagcacaccaactcttgtagttccacatcgtacagatggatttgca
gaagctattcattccccccaggtagctggagttcctcggttcagatttgggccccctgaa
gatatgccacaaaccagctccagtcactctgatcttgggcagctggcatcacaaggaggt
ttagggatgtatgaaaccccactgttccttgcccacgaggaggaatcagggggtcgtagt
gtccccacaacaccgttacaagtggcagcaccggtgacggtgttcacagagagtgcctcg
gccgacgcctcggagcacgcgtcccagtccgtgcccatggtcaccacctccaccggcagc
ctgtccaccaccaccgagcccggcgccggcgatgatgccgacgaggtcttcgcagaggca
gagtctgagggcattacttcagaagcaggtctagaaatcgatagccagcaagaagaagaa
tctgttcaagcatctgatgagtcagatcttccttcaactagtcaggatcctccttcaagt
tcatctgcagacacgagcagcactcagcccaagtccctgcgccgtgtccggctgcagccc
ccgacgctgaggacgggcgtgcgtggccggcagttcaacaggcagaggggtgtaactcat
gccatgggaggcagaggaggcctgaacagaggaaacattagttaa
DBGET
integrated database retrieval system
