KEGG   Molothrus ater (brown-headed cowbird): 118689958
Entry
118689958         CDS       T11569                                 
Symbol
NCBP2
Name
(RefSeq) nuclear cap-binding protein subunit 2 isoform X1
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
mate  Molothrus ater (brown-headed cowbird)
Pathway
mate03013  Nucleocytoplasmic transport
mate03015  mRNA surveillance pathway
mate03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mate00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118689958 (NCBP2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    118689958 (NCBP2)
   03015 mRNA surveillance pathway
    118689958 (NCBP2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mate03019]
    118689958 (NCBP2)
   03041 Spliceosome [BR:mate03041]
    118689958 (NCBP2)
Messenger RNA biogenesis [BR:mate03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     118689958 (NCBP2)
Spliceosome [BR:mate03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    118689958 (NCBP2)
SSDB
Motif
Pfam: RRM_1 RRM_10 RRM_occluded
Other DBs
NCBI-GeneID: 118689958
NCBI-ProteinID: XP_036244380
LinkDB
Position
10:complement(13196664..13200162)
AA seq 166 aa
MSFGGTLSILRSDSYAELSQYRDQHFRGTRYDQERLLRKSCTLYVGNLSFYTTEEQIHEL
FGKSGDIKKVIMGLDKVKKTACGFCFVEYYARGDAENAMRYINGTRLDDRIIRTDWDAGF
KEGRQYGRGRSGGQVGCCTAWGFKGMVTLPNFLILNKYRKISEIAA
NT seq 501 nt   +upstreamnt  +downstreamnt
atgagcttcggcggcacgctgagcattctgcgcagcgactcctacgccgaactcagccag
taccgggaccagcatttccgggggacgcggtacgaccaggagcggctgctgaggaagagc
tgcacactgtacgtggggaacctctccttctacaccacggaggagcagatccacgagctc
ttcggtaaaagcggcgacattaagaaggtcatcatggggctggacaaagtgaagaaaacc
gcctgcggcttctgcttcgtggagtattatgctagaggagatgctgaaaatgcgatgcgc
tacatcaacgggaccagactggatgacaggatcataaggacagactgggatgcagggttt
aaggagggcaggcagtatggccgtggacgatcaggagggcaggtaggttgctgtacagcc
tggggttttaagggaatggtgactttgccaaacttcttgattttgaataaatacagaaaa
atttcagaaatagcagcttag

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