KEGG   Molothrus ater (brown-headed cowbird): 118689980
Entry
118689980         CDS       T11569                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X2
  KO
K15542  polyadenylation factor subunit 2
Organism
mate  Molothrus ater (brown-headed cowbird)
Pathway
mate03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mate00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118689980 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mate03019]
    118689980 (WDR33)
Messenger RNA biogenesis [BR:mate03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     118689980 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Collagen Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 118689980
NCBI-ProteinID: XP_036244434
LinkDB
Position
10:3900702..3972682
AA seq 1322 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKS
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPLHQGAGGPQGFMGPQGPP
GPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGSAGPQGHLGPQGLPGSQTHLGP
QGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLN
PRGMQGPPGPRDNQGPNPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGSMLG
PPQEMRGPPGPQGQQGPPQGSMVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLG
DGPRPPFSQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDARGPPNHHLGPLSDR
RHEQNSGGPEHGPERGLFRGGQDWGDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHPD
KRFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDD
RYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDAFDSPDENSRGR
DHGARGRGRGAPRGARKGLLPTPDEFPRFEGGRKPDSWDGNREPGPRPDHPPHDGHSPAN
RERSSSLQGMDMASLPPRKRPWHDGPGTSEHRDMDAPGGPPEERGKGRGNSGPSQRAQKS
GRSSSLDGDHHDGFHREEAFGGGPGAGNNPSRGGRSSSNWGRGNNMNSGQSRRGGSRGGR
GR
NT seq 3969 nt   +upstreamnt  +downstreamnt
atggccacggagatcggctccccgccgcgcttcttccacatgccgcgcttccagcaccag
gcgccgcggcagctcttctacaagcggcctgacttcgcccagcagcaggccatgcagcag
ctcaccttcgacgggaaacgcatgaggaaagctgtcaacagaaagaccatcgactacaat
ccttctgtcatcaaatatttggagaatagagtgtggcagagagaccaacgagatatgcga
gcgatccagcccgatgcaggatattacaatgatttggtccctcctataggaatgctgaac
aaccctatgaatgctgtgacaacaaaatttgttcgaacctctactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggggagttcactttatggaatggactgactttcaattttgaaacaatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggccatggagcagatgtgaaatgtgttgactggcatccaaccaagggattagttgtt
tcaggaagtaaagatagccaacagcccatcaagttctgggatccaaagactggccagagc
cttgccacactgcatgctcacaaaaacacagtgatggaggtgaaactgaatctcaatggc
aactggctgctgacagcttctcgtgaccacctctgcaagctcttcgacatccgcaacctg
aaggaagaacttcaggtcttcagggggcataagaaagaggccacagctgtggcctggcat
cctgttcatgaggggctgtttgccagtggaggctctgatgggtccttgctgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgaaggaatgatctggagt
ctggcatggcatccccttggacacattctgtgttcaggctcaaatgatcacaccagcaag
ttttggactagaaatcggcctggagataaaatgcgagatcgttacaacttgaacctgctg
cctgggatgtcagaggatggggtggaatatgctccaggagatgatctggagcccaacagc
ctggcagtcattcctgggatgggaatacctgaacagttgaaaatagctatggagcaggag
cagatggggaaagatgagtccaatgacattgagatgacaatcccaggactggattgggga
atggaggaagtaatgcaaaaggaccaaaagaaagtgccacagaaaaaagttccctatgca
aaaccaataccagcacagtttcagcaggcatggatgcaaaataaagttcctttgcctccc
ccacctgagccattgaatgatagaaaggaggatattaagctggaggaaaagaagaaatca
caggcagagattgagcaggaaatggcagcacttcagtacacaaacccacaactcctggag
caactgaagattgagagacttgcacaaaagcaagctgagcaagtgcagccaccaccccca
ggaggatctctccatggacctcagcctttcccagggcaaggcccaatgtcacagatgcct
caaggctttcagcagccccttccacctcagcagatgccaatgaatatgcctcagatggga
cctcctggcccacaaggacagttcagacctccaggaccccaaggacaaatgggacctcaa
ggtccattacaccaaggagctggaggtccacaagggttcatgggaccacaaggacctcca
ggcccccaggggcctccacaaggaatgccacggcctcaggatttacacggacatcaagga
atgcagagacatccaggccctcacgggccgatggggcccccaggcccacagggcagtgct
ggccctcagggacacttgggaccgcagggcctgcccggctcccagactcatttaggacca
cagggcccacctggcccacaaggtcacctgggtcctcagggtccccctggaggtcaagga
atgcaggggccacctggtccacgaggaatgcaaggacctcttcctcacggcatgcaagga
gctccgggatcccaaggcatgcagggccctatatctcaagggcctttgatgggacttaat
ccaagagggatgcagggtccaccaggacccagagataaccagggacctaatccacaaggg
atgatgatgggtcatccacaagaaatgagaggtcctcatatgcaaagtggtttactagga
catggtccccaggagatgcggggccttcagggacccccgcctcaaggttcaatgctggga
ccgccacaagaaatgcgtgggccgccaggtccccagggccagcagggacctccacaaggc
tccatggtggggcctcaaggaaacatgcaaggacctcagggacagccaaacccttcgagg
gggccgcacccttcccagggccctctgcccttccagcagcagaaaacgcctctgttgggg
gatgggcctcgcccccccttcagtcaggatggacagaacccaggtcctcctccactgata
ccaggcctgggccagcaaggaggacaaggtcgtctgggccctcacaaccaaggacctggt
cttaataaaggcgatgcccgtgggccacccaaccatcacctgggcccgctgtcggaccgg
cggcacgagcagaacagcggcggccccgagcacgggcccgagaggggcctgttccgaggg
ggccaggactggggcgatggcagggacagcaggggcatgcccgacaggcggggacctcac
cccgacttccacgacgacttcgatcggcccgacgacttccgggatgatttccaccctgac
aagagattcggccatcgcttacgagagttcgaggggaggggaggcccgccattgcaagat
gagaaatggagacgaggtggacctgggcctccctttcctcctgatcacagggaatttgaa
ggaggtggttccaaccgggggcctcctggtgcttgggaaggacggagaccttcggatgac
agatacccacgggatcctgaggacgcgcgcttccgaggaaggcgagacgagagcttccga
agaggaggaccctcgaggcacgagggccggggacccaggggcagagatggctttcctggc
cctgaagattttgggccagatgatgcttttgactctccagatgaaaactccagaggaagg
gaccatggtgctcgggggcgaggtcgaggtgctccgagaggagctcggaagggtttgctt
cctactccagatgaattcccacgctttgaaggagggaggaaaccagactcctgggatgga
aacagagaaccaggtcctcgtccagatcaccctcctcatgatgggcactctccagccaac
agagaacgttcctcttcactccagggcatggacatggcctcactgccaccacggaaacgt
ccctggcacgatggaccaggaacctctgagcacagggacatggatgctccaggtggacct
ccagaggagaggggcaaaggacgaggaaattcgggaccttcacagagagcgcagaaatct
gggaggtccagttctctagatggagaccaccacgatggattccacagggaggaagccttt
ggtggaggccctggggcaggcaataacccttctcgaggaggaaggagcagcagcaactgg
ggaagaggaaataacatgaactctggccagtcccggagaggaggatctcggggtggacga
ggccgatag

DBGET integrated database retrieval system