Molothrus ater (brown-headed cowbird): 118690163
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Entry
118690163 CDS
T11569
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118690163 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mate04131
]
118690163 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mate04147
]
118690163 (VPS36)
Membrane trafficking [BR:
mate04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
118690163 (VPS36)
Exosome [BR:
mate04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118690163 (VPS36)
Exosomal proteins of colorectal cancer cells
118690163 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
DUF1351
BBL5
DUF5847
Xre-like-HTH
Sigma_reg_C
Motif
Other DBs
NCBI-GeneID:
118690163
NCBI-ProteinID:
XP_036244787
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All DBs
Position
2:64269972..64289894
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AA seq
386 aa
AA seq
DB search
MDRFSWTTGLLELGETLVIQQRGVRLSDGEEKVKFDSGVLLLSTHRLIWRDQKNHECCIA
VPLSQIVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYVKLSFKEHGQIEFYR
RLSEEITQRRWESMPTGQAMQVNKDSQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQTPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVIELQSHNEEEMVAAALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttctcgtggaccaccgggctgctggagctgggagagacgctggtgatccag
cagcgcggcgtgcgcctcagcgacggggaggagaaggtgaaatttgatagtggagtttta
ctgctgagcacacacagactgatctggagggatcagaagaatcatgagtgctgcattgct
gtacctctgtctcagattgtgtttattgaagagcaagcagctgggataggaaagagtgcc
aaaatagtagttcatcttcatcctgcttcttcaaacaaagagcctggtccatttcaaagc
agcaaatattcctatgtcaagctttctttcaaggaacatgggcagattgagttctacaga
cgattatcagaagaaatcacacaaaggagatgggagagcatgcccactggtcaggccatg
caagttaacaaggattcacaggcaggaagaataagggctgtaggaattgtaggtattgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttccgaggcttttgaggac
cttagtaaactaatggagaaggctaaggaaatggtggaattatccaagtcaatagccaac
aagattaaagaaaaacaaggtgacatcactgaggatgagaccattaggttcaagtcctac
ctactgagtatgggtatagctaatccagttacgagggaaacgtatggatctggtacacag
taccacatgcaactggcaaagcaactagctggaatcctgcagacacccttagaggagcga
ggggggatcatgtctctgacagaagtgtactgcctggtgaatcgtgctcgagggctagag
ttgctgtcaccagaagatttagtaaatgcctgtaaaatgctggaatcactgaaattacca
ctaaggcttcggatatttgatagtggtgtgatggtgattgaactccagtctcataacgaa
gaggaaatggtagctgctgctttagagacagtatctgaaaagggttctctcacagctgat
gagtttgctaagctagtggggatgtctgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctacccaaat
ttatttctgacacaaagctaa
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