Molothrus ater (brown-headed cowbird): 118690282
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Entry
118690282 CDS
T11569
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04136
Autophagy - other
mate04140
Autophagy - animal
mate04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
118690282 (ATG4B)
04140 Autophagy - animal
118690282 (ATG4B)
04136 Autophagy - other
118690282 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mate01002
]
118690282 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mate04131
]
118690282 (ATG4B)
03029 Mitochondrial biogenesis [BR:
mate03029
]
118690282 (ATG4B)
Peptidases and inhibitors [BR:
mate01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
118690282 (ATG4B)
Membrane trafficking [BR:
mate04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
118690282 (ATG4B)
Mitochondrial biogenesis [BR:
mate03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118690282 (ATG4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
118690282
NCBI-ProteinID:
XP_036244988
LinkDB
All DBs
Position
10:4560951..4580659
Genome browser
AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFEYEDFPETKEPVWILGRKYSVFTEKEEILLDVTSRLWFTYRKNFPAI
GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKRQMDNYFNVLNAFIDKKDS
YYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLATFDTWSSLAVHIAMDNTVVMEEIRR
LCQSNVPCAGAAACPALDSDVLYNGCPEDLGLRGRLPLWKPLVLLIPLRLGLTEINEAYI
ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPGDSGCLPDESFH
CQHPPCRMSIAELDPSIAVGFFCNTEADFNDWCQQIKKLSLVRGALPMFELVERQPSHFS
NPDVLNLTPDSSDADRLERFFDSEDEDFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctacgcttacctacgacaccctcaggtttgagtatgaagacttccctgag
accaaagaacctgtttggatccttggcaggaaatacagtgtttttacagagaaggaagag
atcctgctggatgtgacctctaggctttggttcacctacagaaagaacttccctgctatt
ggaggaacgggtcccacctctgacacgggctggggctgcatgctgcgctgtggccagatg
atctttgctcaggccttggtctgcaggcatttgggaagagactggaggtggataaaaggg
aagaggcagatggataattacttcaacgttcttaatgccttcattgacaaaaaagacagc
tactactccattcaccagatagcccagatgggagtcggggagggaaaatccataggccag
tggtacggcccgaacacggtggcacaggtgctcaaaaaacttgcaacttttgatacctgg
agttccctggcagtacacatagccatggacaacacagtggtgatggaagaaatccggagg
ctgtgccagtccaatgtgccatgtgctggagctgcagcatgccctgccctggactcagat
gtgctctacaatgggtgcccagaggacctggggctcagagggaggctccccctgtggaaa
ccactggtgctgctgatacctctccgcctcgggctcacagagatcaatgaagcctacatt
gaaacactaaagcactgcttcatgatgccccagtccctgggagtgatcggagggaagcca
aacagtgctcactacttcattggctatgtaggtgaggagctcatttacctggacccccac
accacgcagccggcggtggagcccggtgacagcggctgcctccccgacgagagcttccac
tgccagcaccccccgtgcaggatgagcatcgccgagctcgacccctccatcgccgtgggc
tttttctgcaacacagaggcagactttaatgactggtgccaacaaatcaaaaagctgtcc
ctggtcagaggagcgctgcccatgttcgagctggtggagcgccagccctcccacttctcc
aaccccgacgtcctgaatctcacaccagactcctctgatgccgacagattggaaaggttc
tttgactcggaagatgaagactttgaaatcctgtccctttga
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