Molothrus ater (brown-headed cowbird): 118690588
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Entry
118690588 CDS
T11569
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
mate Molothrus ater (brown-headed cowbird)
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GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
118690588
NCBI-ProteinID:
XP_036245288
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Position
13:9377794..9586873
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AA seq
1088 aa
AA seq
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MRLPVLCALVTLLSLSPCRAVSFPEDEDPINVVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYITGRDQVYTVNLNEVPKSEVIPSKKLTWRSKQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNTLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIEINGVPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPSVTEEPWFTKTRVRYR
LTAIAVDHAAGPYQNYTVIFVGSEAGVVLKILAKTRPFSLNDSILLEEIEAYNHAKCNAE
SEEDRRVISLQLDRDHHALFVAFSSCVVRIPLSRCERHGSCKKACIASRDPYCGWLDHEA
CGRVTPGMLFSLFVSYNHSTGGYVQDVEYGNTAQLGDCHEILPTTATPDYKIFGDPTSDM
EFSSASITTMASIPVISPKVIGSWKPKVTGSRKFVVQDDPNTSDYSDPLSGVPKGVRWEV
QSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDIFVRKSRKIHKDAESAQSCTDS
SGSFAKLNGLFDSPVKEYQQNIDSPKLYTNLLTSRKELPPNGDTKSMMMDHRGQPPELAA
LPTPESTPVLQQKTLQAMKSQSDKAHGNLNASRKETPLKSPQFFPSSPPPHSPLSHGHIP
SAIVLPNATHDYNTSFSNSNAHKADKKMQHIDHPLTKSSSKRDHRRSVDSRNTLNDFLKH
LNETTNNPKAIMGDIQVAHQTLMLDPMGNMSEIPPKVPNREASLYSPPSTLPRNSPTKRV
DVPTTPGVPMTSLERQRGYHKNSSQRHSISALPKNLNSPNGVLLSRQPSINRGGYMAPTA
GTKMDYMQGTPVSVHLQPSLSRQSSYTSNGTLPRTGIKRTPSLKPDVPPKPSFVPQTTPV
RPLNKYSY
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccccgtgctctgtgccttggtgacactgctgagcctgtccccctgccgggcc
gtcagcttccccgaagacgaggaccccatcaatgtcgtggactaccactattcaaggcaa
tatccagtatttagaggacgcccttcaggcaatgaatctcagcacagactggacttccaa
ctaatgttgaaaattcgagacacactttatatcactggcagggaccaggtttacactgta
aacttaaatgaagttccgaaatcagaagttatcccaagcaagaaattaacatggagatca
aagcagcaggacagagagaactgtgctatgaaaggcaaacacaaagatgaatgccataac
ttcattaaagtctttgttccaagaaatgatgagatggtgtttgtctgtggaacaaatgca
tttaaccctatgtgcagatactatcggttgaatacattagagtatgatggggaggaaatt
agtggtttggcaagatgcccatttgatgccagacaaaccaatgtcgccctctttgctgat
ggaaaattgtattcggcaacagtagcagatttcctggcaagtgatgctgttatttatcgc
agcatgggggatggatctgccttaagaacaataaagtatgactccaaatggataaaagag
ccacatttcctccatgccatagaatatgggaactatgtttatttcttcttccgagaaatt
gctgtagagcacaacactttaggcaaggctgtgtattcccgtgtggcacgcatctgcaaa
aatgacatggggggctcccaaagggtcctggagaagcactggacatcctttctgaaagct
cggctcaactgctcagttcctggggattcattcttctactttgatgttctgcagtctatc
acagacatcatagaaatcaatggagtgcccactgttgtgggtgtattcaccacacagctc
aacagcatccctggttcagcagtgtgtgctttcagcatggatgacattgagaaagtcttc
aaagggagatttaaagaacaaaagactcctgactctgtgtggacagctgtacctgaagac
aaagtaccaaagccaagacctggctgctgtgcaaaacatggcctagcagaggcttacaaa
acctccattgatttcccagacgaaacgctctccttcatcaaatctcatccattgatggac
tcagctgttccctcagtcactgaggagccctggtttaccaaaacacgcgtcagatacaga
ttgacagcaattgctgtagaccacgctgctggaccctaccagaactacacagtcatattt
gttggctccgaagcaggagtagtacttaaaatcttggcaaagaccaggcctttttctttg
aatgacagcatattactggaagagattgaagcatataatcatgcaaagtgcaatgcagaa
agcgaggaggacagaagagtcatttccctccagctggacagagaccaccatgctctgttc
gtggcattctccagctgcgtcgttagaattcccctcagtcggtgtgagcgtcacgggtca
tgtaaaaaggcatgtattgcttcacgggacccatactgtggctggttagaccatgaggca
tgtggaagagtgacaccaggcatgctgttctctttgtttgtttcatacaaccacagcact
ggaggatacgtccaagatgtcgaatacggcaacacggcgcagcttggggactgccatgaa
attttgcctactacagctacaccagattacaaaatatttggcgacccaacatctgacatg
gagttctcctcagcttccattaccacaatggcaagtatcccagttatatcacctaaagtg
attggttcctggaaacctaaagtgactggctctcggaaatttgtagttcaagatgaccca
aacacttctgattattctgatccattatcaggtgtcccaaagggtgtgaggtgggaagta
caatcaggagagtccaaccaaatggtgcatatgaatgtcctaatcacttgtgtctttgct
gcgtttgtcctgggagcctttattgcaggagtggccgtttactgttaccgggatatattt
gtgcggaaatccaggaaaatacacaaagatgcggaatcggctcagtcctgcactgactcc
agcgggagctttgccaaactgaatgggctgtttgacagccctgtcaaggagtatcagcag
aacattgattcacccaaactgtacacaaacctgctgaccagcaggaaggagttgcctcca
aacggcgataccaagtccatgatgatggaccacaggggacagcctccagaattagctgca
cttccaactcctgaatctactccagttctccaacaaaagactctgcaggctatgaagagt
cagtcggacaaagcgcacggtaacctcaacgcttcacgaaaagaaacccccctaaaaagc
cctcagttttttccttctagtcctccaccccactctcctctaagtcatggacatattccc
agtgctattgttcttcccaatgctacccatgactacaacacatctttctcaaattctaat
gcgcacaaggcggacaaaaagatgcaacatattgatcatccacttacaaaatcatccagc
aaaagagaccacaggagatctgttgattccaggaacaccctgaatgattttctgaaacac
ttaaatgaaactactaataatcccaaagcaattatgggagatattcaagtggcccaccag
actttaatgctggatccaatgggcaatatgtctgagatcccacctaaggttcccaacagg
gaggcgtctttatactctcctccatcgactctgccgagaaacagtcccacaaaacgagtg
gatgttcccaccactcctggagtaccaatgacctctttggaaaggcagaggggttatcac
aaaaattcttcacagaggcactcaatatctgcccttcctaaaaacttgaactcaccaaat
ggtgttttgttatccagacagccaagtattaatcgtggggggtacatggctcccacggca
ggcactaagatggactacatgcaagggacgcctgtcagcgttcacctccagccttccttg
tccaggcaaagcagctacacgagcaatggcaccctgcctcgcacaggaataaagaggaca
ccctccctaaaacccgacgtgccaccaaaaccctcattcgtccctcagacaacaccagtc
agaccactgaacaaatacagctactag
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