Molothrus ater (brown-headed cowbird): 118690863
Help
Entry
118690863 CDS
T11569
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
mate
Molothrus ater (brown-headed cowbird)
Pathway
mate04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118690863 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mate03036
]
118690863 (SIN3A)
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
118690863 (SIN3A)
REST complex
118690863 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118690863 (SIN3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
118690863
NCBI-ProteinID:
XP_036245725
UniProt:
A0A7L3VTC8
LinkDB
All DBs
Position
13:complement(3611626..3642911)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRITSSTEAFPHQHRVLAPAPPVYEAVSDTMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSGHHHPAPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPPHPSQPSAQSTPTPAQ
PAPQPTPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRP
NQNGCQIRRHSGTGATPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSL
AYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLH
QILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYY
PAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENSNGATGGLLASQSSRTLLEAAYQRKAEQLMSEENCFKLMFIQSRGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKSMENMESLDKVECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETNKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTIFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgattggatgagcaggagtctcccgtgtatgcgtcgcagcagagacgtatc
accagcagcaccgaggctttcccgcaccagcaccgcgtgctcgccccggccccgccggtc
tatgaggcggtgtccgacaccatgcagtcggccacgggcatccagtactctgtaactccc
agctaccaggtgtcggccgtgccgcagagctcgggcagccacgggccggccatcgccgcc
gtgcacagcggccaccaccaccccgcgcccgtgcagccccacggcagccaggtggtgcag
agccacacgcaccccacgcccccagccgtgcctgtgcagggccagcagcagttccagagg
ctcaaggtggaggatgcattgtcttaccttgaccaggtgaagctacagtttggtagtcag
ccacaggtctacaatgacttcttggatattatgaaggaatttaaatctcaaagcatcgac
actccgggggtgatcagccgtgtgtcgcagctcttcaagggccacccagacctgatcatg
ggcttcaacaccttcctgccacctggctacaagattgaggtgcagaccaatgacatggtg
aacgtgaccaccccggggcaggttcaccagatccccacgcacgggctgcagccccagccg
cagccgcagccgccgcatccgtcgcagccttcggcgcagtcgaccccgacaccagcacag
ccggccccacagcccacacctgccaaaatcagcaagccatcgcagttgcaggctcacacc
cctgccagccagcagacgcccccaatcccgccgtacgcgtcgccgcgctcgccgccggtg
cagccgcacacgcccgtgacaatctctctgggcaccacaccatccctgcagaacaatcag
cccgtggagttcaaccacgccatcaactatgtcaacaagatcaaaaaccggttccaggga
cagccagacatctacaaagccttcctggagattctccatacgtatcagaaagagcagcgt
aatgccaaggaggcaggagggaactacacaccagccctgacagagcaggaggtctatgct
caggtggctcgcctcttcaagaaccaggaggatctgctctcggaatttgggcagttcctg
cctgatgccaacagctctgtgctgttgagcaagacaactgcagagaaagtggaatcagtc
aggaatgaccacgggggcacagtgaagaagccacagctcaacaacaagcagcagagaccc
aaccagaatggctgccagatccgacggcactcgggcaccggagccacccctccggtgaag
aagaaaccaaaactgcttggtttgaaagaccagtctttggcagaagccagcaaacatggt
gtggggacagaatctctcttcttcgagaaggtccgcaaagctctgcgcagcaccgaggcc
tacgagaactttctgcgctgcctggtgatcttcaaccaggaggtgatctccagggctgag
ctcgtgcaactggtctccccattcctggggaaattcccagaactgttcacttggtttaaa
aactttctgggatataaggagtctgttcacatggagacgtatcccaaggaacgggctact
gaggggattgccatggagattgactatgcctcctgcaagaggctgggctccagctacaga
gccttgcccaagagctaccagcagcccaagtgcacggggaggactccactgtgtaaagag
gttttgaatgacacctgggtctccttcccatcctggtctgaagattccacatttgtgagc
tccaagaagacccaatatgaagagcacatctacaggtgtgaggatgagcgttttgagctg
gatgttgtcttggagaccaacctggcaaccatccgcgttctcgaggcaatccagaagaag
ctgtcacgcttgtctgcggaggagcaggccaaattccggctggacaacaccctggggggc
acctcggaggtgatccaccgcaaggctctccagaggatatacgctgacaaagcagctgac
atcatcgatgggctgcgcaagaacccctctgtggctgtgcccatcgtgctgaaaaggtta
aagatgaaagaggaagagtggcgagaagcccagagaggatttaataaagtctggcgagag
cagaatgagaagtattacctgaaatccttggaccaccagggcatcaacttcaagcagaat
gataccaaggtcctaaggtcaaagagtctcctcaatgagattgaaagcatctatgatgag
aggcaagaacaggcttcagaagacaatgctggagtccccacaggcccacacctctcacta
gcctatgaagacaagcagatcctggaagatgctgcctctctcatcatccaccacgtgaag
cggcagacgggaatccagaaagaggacaagtacaaaatcaagcagatcatgtatcacttc
attccagacctgctgtttgctcagcgaggtgaactctcagatgtggaggaggaagaagag
gaggaaatggatgtggacgaagccaccggggctgcaaaaaagcacaacggtgttgggggc
agtcctcccaaaaccaagctgatgttcaacaacacgacagcccagaagctgcggggcatg
gatgaggtctacaacctcttctacgtgaacagcaactggtacatcttcatgaggctgcac
cagatcctgtgcttgcggctgctgcggatctgcacccaggccgagcggcagatcgaggag
gagacacgggagcgggagtgggagagggaagtgctgggcataaagcgagacaagagtgac
agtcctgccatccagctgcgactgaaggagcccatggacatcgatgttgaggattattac
ccggccttcctggacatggtgcgcaacctgctggacgggaacatggactcgtcgcagtac
gaggactcgctgcgcgagatgttcaccatccacgcctacatcgccttcaccatggacaag
ctgatccagagcatcgtcagacagctgcagcacatcgtgagcgatgagatctgtgtgcag
gtgacagacctgtacctgtcagagaacagcaacggggccaccggaggcctcctggcgtcc
cagtcctcccgcacgctcctggaggccgcctaccagcgcaaagccgagcagctcatgtcc
gaggagaactgcttcaagctgatgttcattcagagcagaggtcaagttcagttaaccatt
gagctgctggacacagaagaggaaaactcagatgaccctgtggaagcagagcgctggtct
gactacgtggagcggtacgtcaactctgactctacctcccccgagctccgcgagcacctg
gcccagaaacccgtcttcctgcccaggaatctgaggcggatccgcaagtgtcagcgtggt
cgggagcagcaggagaaggaagggaaggagggaaacagtaagaagtccatggagaacatg
gagagcctggacaaggtggagtgtaaattcaagctgaactcctataagatggtgtatgtg
atcaaatcagaggattacatgtacaggaggaccgcgctgctgcgagctcagcagtcccac
gaaagggtgagcaagcggctgcaccagcgattccaggcctgggtggacaaatggaccaag
gagcacgtgccccgtgaaatggcagccgaaacaaacaagtggctcatgggtgaaggcttg
gagggcttggtgccctgcaccaccacctgtgacacagagaccctgcactttgtcagcatc
aacaagtaccgcgtcaaatacggcacgatattcaagacaccctag
DBGET
integrated database retrieval system
