Molothrus ater (brown-headed cowbird): 118690957
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Entry
118690957 CDS
T11569
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118690957 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mate03019
]
118690957 (MYO5C)
04131 Membrane trafficking [BR:
mate04131
]
118690957 (MYO5C)
03029 Mitochondrial biogenesis [BR:
mate03029
]
118690957 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mate04812
]
118690957 (MYO5C)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118690957 (MYO5C)
mRNA cycle factors
P-body specific factors
118690957 (MYO5C)
Membrane trafficking [BR:
mate04131
]
Others
Actin-binding proteins
Myosins
118690957 (MYO5C)
Mitochondrial biogenesis [BR:
mate03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118690957 (MYO5C)
Cytoskeleton proteins [BR:
mate04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118690957 (MYO5C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
DUF2375
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
118690957
NCBI-ProteinID:
XP_036245869
LinkDB
All DBs
Position
13:8483407..8517467
Genome browser
AA seq
1743 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDSFLHVQLEDGTDLSYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDHSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEYEHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMVETQKTFALLGLKRDFQMDVFKMLAAILHLGNVEIAAVGDERSSISMEDKHLSIFCE
LLDLNCDKMARWLCHRKIVTTSETVVKPMTRAQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCANFFQDSPVSISPF
SSAINIKSARPVLKSPNKQLRTTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDRLRQACTLLQRRVRGWLQRRRFVALR
RAALTVQQYYRGQRTVRQAVTARNLKETWAAIIIQKYCRGYLVRRLCQLILVAAVTIQAY
TRGFLARKKYRKMREEQKAVVLQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKRIEE
QSRENHGLLERLTNLASAHMNDVDTIQKLESELEKLTAQKRTYEEKGKKYKEDSEQKILK
LENQNKELQEQKKTLEIKLQEKTEEMKEKMDDLTQQLFNDVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKILKEEKIQLQQQIQQEIIIQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAHSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVAELENQKLDLENRLQEQTIKLKGKMEEMSNRLHYELERDRTQ
RRTTEAQNEVDIKEKENLKDTIQGIEGLSNGVMQDEVQGELQSKIKQVTTRLAVENLDLE
EKLDMKDRIIKKLEDQIKTLTKTIEKCKILLSLVPTVPKEYIGMMEYKKEDEERIIQNLI
LDLKPRGVVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDFE
MLSFWLSNTYYFLNCLKQYSGEEEFMKHNTPRQNKNCLKHFDLSEYRQILSDLAIQIYHQ
FIIVMENNIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFY
STMCQNGLDSELLKQTVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKD
KNLQSSNAKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDF
EKRVTPSFVRKVQAMLNNREDVPQLMLDTKHLFQVTFPFTPSPHALELIQVPSSFKLGFL
TRV
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaatagggtttggatccctgataatgaagaa
gtctggcagtctgcagaaatcacaaaaaactacaaagctggagacagttttctccatgta
caattagaagatggaactgacctgagttaccctgttgatccagctgctttgccaccacta
cgaaatcctgacatacttgttggtgaaaatgatctcactgccctcagttacctgcatgaa
ccagctgttctacacaaccttaaaattcgttttgtggagtctaagcttatctacacatat
agtgggataattctggttgcaataaacccctataagcagctgccaatatatggagatgcc
attatccatgcatatagtgggcaaaacatgggggacatggatccacacatatttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaaaaatcagtccattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaaggtataccatgagatactttgccact
gtgagtaagtcaagcagcaatgctcacgtggaggataaagtactggcatccaatccaata
actgaggctgtgggcaatgcgaaaaccacacggaatgataacagcagtcgatttgggaaa
tacactgaaatcagttttgatcacagttaccaaatcattggagctaacatgagaacgtac
ctgcttgagaaatccagagttgtatttcagtcagaaaatgaaaggaactaccatatattt
tatcagttgtgtgcatctgctatgcaacctgaatatgaacatcttaaattggggagcgca
gaagaatttaactacacacgaatgggtggcagcactgtaatagaaggggttgatgacaga
gcaaatatggtggagactcagaagacatttgccttactcggtctgaagagggattttcag
atggatgtttttaaaatgctggcagcaatcctgcacttgggcaatgtggaaatagcagct
gttggagatgaaagatcatccatcagtatggaagataaacacctcagtatattctgtgag
cttctggatttaaactgtgacaaaatggcccggtggctgtgccacaggaagattgtcacc
acctcagagaccgtggtgaagcccatgacaagggcccaggctgtcaacgccagggatgcc
ctggcaaagaaaatctactcccatttatttgacttcattgtggaaagaattaaccaagct
ctgcagttccctggcaaacagcacactttcattggtgttttggatatttatggatttgaa
acatttgatgtgaacagttttgaacaattttgtatcaattatgctaatgaaaaactacag
cagcagtttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttttatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaacttctggatgaagaatgcttgttgcctcatggaaaagatgaaaac
tggcttcaaaagctgtataataattttgtcaataaaaacgcactctttgaaaagccaagg
atgtcaaacacttctttcatcattcaacactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtacacgaagtattgattgaaatcttgaaagag
agcaagtttcatctgtgtgcaaatttttttcaagacagtccagtgtccatctcacctttc
agttcagctataaacatcaaatctgccagacctgttctgaaatcacccaacaaacagctc
cggaccactgtgggcagtaagttcaggaattctttgtctttacttatggtgacactcaat
gcaaccactcctcattatgtgagatgcataaagccaaatgatgagaagttgccttttgag
tttgattccaagagagttgctcagcagctgcgagcatgtggtgttttggaaacgattcgg
attagtgcacagagctacccatccaggtggacttacattgagtttttcagccgttacagc
attcttatgacacagcaggagctctccataaatgacaagaaacagatttgcaagattgtt
ttgcagaggctgatccaggatcctaaccagtatcagtttgggagaacaaagatttttttc
agagcggggcaggtggcttacctggagaagctgcgctcggacaggctgcggcaggcgtgc
acgctgctgcagcggcgcgtgcggggctggctgcagcgccggcgcttcgtggccctgcgc
cgcgcggcgctcaccgtgcagcagtactaccgtgggcagcgcaccgtcaggcaagctgta
actgcaagaaatctgaaggaaacatgggcagctataatcattcagaaatactgtcggggt
tacctcgtccgtagactttgccagctcatccttgtggctgctgtgacaatccaagcttac
acaagaggatttctagcaagaaaaaagtatcgcaagatgcgtgaggagcagaaggctgtg
gttctccagaaatatgcccgtgcatggctggccaggcgcaggttccagaacattcggcgc
ttcgtgttgaatatccagctctcatacagagttcagcagctgcagaaaaggatagaagaa
cagagtagagaaaatcatggcttgctggaacgattgaccaatctggcttcagctcatatg
aatgatgtggatacaattcagaaacttgaatcagaactcgaaaaattaactgctcaaaag
agaacatatgaagagaaagggaaaaagtataaagaggacagtgagcagaaaatcttaaaa
cttgagaatcaaaataaagaattacaagaacaaaagaagaccttagaaataaaactccaa
gaaaaaactgaggaaatgaaagagaaaatggatgacctcacacagcaactcttcaatgat
gtacaaaaagaagaaaaccagcgaatgatacttgagaaaaatttccaaaaccagaagcag
gactatgaaaaggagattgaactgctcaagggagaaattaagatcctgaaagaagaaaaa
attcagctacagcaacaaattcagcaagaaattatcattcaggatggcttaaaaatggaa
gtaggacagcttacaaaacaagcacagaaaatacctgaattgcaaaaggaaattgaactt
cttcagacacagaagttggatgttgaaaagcaggcccactcacagaagagagaattgagg
gaaaagatgtcagaagttacaaagcagctacttgaaagttacgattttgaagatgtaaga
agcagactctctacagaggatctggagcacttaaatgaggatggagagctgtggtttgct
tatgagggcttgaaaaaagccacaagagtattggaaagccatttccagtctcagaaagaa
atatatgagaaggagattgagggtttgaactttaaagttgaacatcttagtcaagatatt
aatcatctacagaaattattccgagaggaaaatgacataaatgatggcattcggttggaa
gttagcaggctaacttcagaaaatctggtaatcccagatcttaagcagcaagttgctgaa
cttgaaaatcaaaagttagatcttgaaaaccgtcttcaagagcagaccataaagttgaaa
ggaaaaatggaagagatgtcaaatcggctgcattatgagctggaacgggataggacacaa
agacgaactactgaggcccagaatgaagtagacataaaagaaaaagagaatctgaaggac
acaatccaaggaattgagggactgagcaatggtgtgatgcaagatgaagtccagggtgaa
ctacaaagcaagataaagcaagtgacaactcgacttgctgtggaaaacttggatcttgaa
gaaaagctagacatgaaagacagaataataaaaaaattagaagatcagatcaaaactctg
accaagactattgaaaaatgtaagatattattatcccttgtgcccactgtgcccaaagag
tacattggaatgatggagtacaaaaaagaggatgaagaaaggatcattcagaatctgatc
ctcgatttgaagccccgcggagttgtagttaatatgattcctggccttccagctcacatc
ctgttcatgtgtgtgaggtatgcagattacctgaacgatgctgacatgctgaagtctttc
atgaatgtaaccattgatggcatcaagcaggttgttaaggaacattcagaagactttgag
atgttgtccttttggctttccaacacatattattttcttaactgtttgaagcagtacagc
ggggaagaggaattcatgaagcataacactccacgtcagaataagaactgtttgaagcat
tttgatctctcagaatacagacaaattctcagtgatctggccattcaaatatatcaccaa
ttcattattgtaatggagaacaacattcagcacatgattgtaccaggcatgctggaatat
gaaagtcttcaaggaatttctggcctgaaacctacgggattccgtaagcgttcttccagt
atagatgacacggatacctacactatgacctctatcttgcagcagctcagctatttttat
agcactatgtgtcagaatggcttggactctgagctcctaaagcagacagtgaagcagctt
ttctttctgattggagctgtcaccctcaatagtctctttctccgcaaggacatgtgctcc
tgtagaaaaggaatgcagataagatgtaatatcagctacttggaagaatggcttaaggac
aagaatcttcaaagcagcaatgccaaagaaactttggagcccctgtctcaagcagcctgg
ctccttcaggttaaaaagatcacagatgatgatgccaaggaaatatgtgaacactgcaca
tctctttctactgtgcagatagttaagatcctgaactcatacactccaatagatgacttt
gagaaaagagtgactccatcgtttgttcggaaggtccaggctatgctaaacaaccgtgag
gatgtcccacagctgatgcttgataccaagcatctcttccaagtgacgtttcctttcacc
ccctctccgcatgctttggaactgatacaagtccccagcagcttcaaacttggctttctc
acgagggtttaa
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integrated database retrieval system
