Molothrus ater (brown-headed cowbird): 118691178
Help
Entry
118691178 CDS
T11569
Name
(RefSeq) B-cadherin-like isoform X1
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04514
Cell adhesion molecule (CAM) interaction
mate04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118691178
04519 Cadherin signaling
118691178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mate04515
]
118691178
Cell adhesion molecules [BR:
mate04515
]
Cadherins
Major cadherins
118691178
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
Motif
Other DBs
NCBI-GeneID:
118691178
NCBI-ProteinID:
XP_036246171
LinkDB
All DBs
Position
12:20267508..20273316
Genome browser
AA seq
853 aa
AA seq
DB search
MRGPRSGLCPLSIFILLLLSPLLPAAALSPAPPRVLPGLRRGPLPAPGSSGGCAGPYSTE
EPDVGVREDGGPVRLPGVGRALAVPPRDAGSPRCAAGQPEPAPAPAESRRSPQELPRARA
ALRRQKRDWVIPPIKVPENERGPFPKKLVQIKSNRDRDTKIFYSITGQGADAPPEGIFTI
EKESGWMKVTQPLDREHIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVF
RGSVPEGALPGTSIMQVTATDADDAVETYNGVIAYSILSQEPREPHPQMFTVNRATGTLS
VIASGLDRERVREYTLTVQAADLDGEGLTTTALAVIEIADVNDNAPEFDPKTYEAAVPEN
VAGREVARLAVTDLDEPGTPAWRAVYSILRGNDGGAFAISTDPATNEGILRTAQGLDYEA
KQQFVLHVAVANEVPFVVKLPMATATVTVTVEDVNEAPVFVPPVQLATVSEDVPPGQTLT
ACTAQDPDKAQGQRIKYLVGHDPAGWLAVHPENGLVTARDQLDRESPFVKNNTYMAVLLA
VDDGSPPATGTGTLLLTLLDVNDNGPEAEPRDITVCQRSPQPQLLTVTDRDLPPNTGPFR
AELTHGSGDSWAVEVGDTGDTVTLQLVAPLEPDTYSVYLRLLDQPGRAQVTIVTARVCAC
EGQAQGCPQRSQPVTTLPFVLATLGALLALLLILLLLLLFVRRRKVTKEPLLLPEDDTRD
NIFYYGEEGGGEEDQNYDLRQLHRGLDARPEVIRNDVAPTLLPAPQYRPRPANPDDIGNF
IDENLKAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDGDQDYDYLNDWGGRFR
KLAELYGGGEEDD
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggccgcgctccgggctctgcccgctctccatcttcatcctcctcctcctctcc
ccgctcctgccggcggccgccctgtccccggccccgccgcgcgtcctcccggggctgcgc
cgcgggccgctccccgccccagggagctccggaggctgcgcggggccgtacagcacggag
gagcccgatgtcggggtgcgggaggacgggggccccgtgcggctgccgggggtgggcagg
gcgctcgccgtccccccccgggatgctggttctccccggtgtgccgctggccagccagag
cctgccccagctcccgcagagagcaggcgctccccccaggagctgcccagggctcgagct
gctctcaggaggcagaagagggactgggtgatcccccccatcaaggttcctgagaatgag
aggggccccttccccaaaaagctcgttcagatcaaatccaaccgcgacagagacaccaag
atcttctacagcatcacagggcagggagcagatgccccccccgagggcatcttcaccatt
gagaaggagtcgggctggatgaaagtgacgcagccgctggaccgcgagcacatcgacaag
taccacctcttctcccacgccgtgtctgagaatgggaagccagtggaggagccgatggag
atcatcgtgacggtgacagaccagaatgacaacaagccccagttcacgcaggaggtgttc
aggggctctgtgccagagggagctctgccaggcacctccatcatgcaggtgacagccacg
gatgcggacgatgcagtggagacctacaatggtgtcatcgcctactccatcctcagccag
gagccacgggagccccatccccaaatgttcactgtcaaccgggccaccggcaccctcagc
gtcattgccagcggcctcgaccgggagcgcgtgcgggagtacacactgaccgtgcaggca
gctgacctggatggggagggactgaccaccacagcgctggccgtcattgagatcgctgat
gtcaatgacaacgcccccgagttcgaccccaaaacgtacgaggcggccgtgccagagaac
gtggctgggcgggaggtggccaggctggctgtcaccgacctggacgagcccggcacgccg
gcctggcgagccgtctactccatcctgcgcggcaacgacgggggagccttcgccatcagc
accgaccctgccaccaacgagggcatcctgcgcaccgcccagggtctggactatgaggcc
aagcagcagttcgtgctccacgtggcagtggccaacgaggtcccctttgtcgtgaagctg
cccatggccactgctacggtgacagtcactgtggaggatgtcaatgaggccccggtgttc
gtgccaccggtgcagctggccacggtgtcagaggatgtgcccccggggcagaccctcaca
gcctgcacggcccaggaccctgacaaggcgcagggccagaggatcaagtacctggtgggg
cacgacccggcgggctggctggctgtgcaccccgagaatggcctggtgaccgcgcgggac
cagctggaccgcgagtccccctttgtcaagaacaacacctacatggctgtgctgctggct
gtggatgatggctcaccgccggccacgggcacgggcacgctgctcctcaccctgctggat
gtgaacgacaacggccccgaggccgagccacgggacatcactgtctgccagcgcagcccc
cagccccagctcctcaccgtcaccgaccgggacctgccccccaacaccggccccttccgc
gccgagctcacccacggctcaggggacagctgggctgtggaggtgggggacacaggtgac
acggtgacgctgcagctggtggcaccgttggagcccgacacctacagcgtgtacctgcgg
ctgctggaccagccgggcagagcccaagtgaccattgtcaccgcacgggtctgcgcctgc
gaggggcaggcacagggctgtccccagaggtcccagcctgtcaccaccctgcccttcgtc
ctcgccaccctgggcgcactgctggccctgctgctcatcctgctgctgctgctgctcttt
gtgaggaggaggaaggtgacaaaggagccgctgctgctgcccgaagatgacacaagggac
aacatcttctactacggggaggagggtggcggcgaggaggaccagaactacgacctgcgg
cagctgcaccgggggctggacgcccggcccgaggtgatccgcaatgacgtggcccccacc
ctcctgccagccccgcagtaccggccccgccccgccaaccccgacgacatcggcaacttc
atcgacgagaacctgaaggcggccgacacggaccccacggcccccccctacgactcgctg
ctggtgttcgactacgagggcagcggctcagaggccacctcgctcagctccctcaactcc
tccgcctccgacggcgaccaggactacgactacctcaacgactggggcggccgcttccgc
aagctggccgagctctacggcggcggcgaggaggacgattag
DBGET
integrated database retrieval system
