Molothrus ater (brown-headed cowbird): 118691225
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Entry
118691225 CDS
T11569
Symbol
NUDT21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118691225 (NUDT21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mate03019
]
118691225 (NUDT21)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
118691225 (NUDT21)
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
118691225
NCBI-ProteinID:
XP_036246237
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Position
12:complement(13005468..13012799)
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AA seq
227 aa
AA seq
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MSVVPPNRSQTGWPRGVNQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVQQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtgccgcccaaccgctcgcagaccggctggccccgcggggtgaaccagttc
gggaacaagtacatccagcagacgaagccgctcacgctggaaaggaccatcaacctgtat
cctctgaccaattacacgtttggcacaaaggagcccctgtatgagaaggacagttccgtg
gcagctcggttccagcgcatgagggaggagtttgacaagattggcatgaggcggacggtg
gaaggagttctgattgtgcatgagcacaggctgccccacgtgctcttactgcagctgggt
acaacttttttcaagctacctggtggtgaactcaatccaggagaagatgaggtagaaggg
ctcaaacgcttaatgacagagatactgggtcgtcaggatggtgttcagcaagactgggtg
attgatgactgcattggcaactggtggagaccaaactttgaacctcctcagtacccatat
atcccagctcatattacaaagccaaaagaacacaaaaagctttttttggtccagcttcaa
gaaaaggctttgtttgcagtccccaaaaattacaagctggttgctgcaccattgtttgag
ctctatgacaatgcaccaggatatggacctattatttccagccttcctcaacttttgagc
aggttcaactttatttacaactga
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