Molothrus ater (brown-headed cowbird): 118691390
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Entry
118691390 CDS
T11569
Symbol
CDH5
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04514
Cell adhesion molecule (CAM) interaction
mate04519
Cadherin signaling
mate04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118691390 (CDH5)
04519 Cadherin signaling
118691390 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118691390 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mate04515
]
118691390 (CDH5)
04090 CD molecules [BR:
mate04090
]
118691390 (CDH5)
Cell adhesion molecules [BR:
mate04515
]
Cadherins
Major cadherins
118691390 (CDH5)
CD molecules [BR:
mate04090
]
Proteins
118691390 (CDH5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Ig_CLSTN
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
118691390
NCBI-ProteinID:
XP_036246450
LinkDB
All DBs
Position
12:1275977..1304740
Genome browser
AA seq
784 aa
AA seq
DB search
MKLGHLGLGLQKKMSHLILLFSLFLAPAFADGRSQKSTQNLCSNDVSHKRQKRDWIWNQL
HIQEELDTPLPHHVGKITSSVRNKNAKYIIEGEFANTIFKVEETSGDVYAFERLDREKKA
EYELTALIIDRTNNRSLERPSRFIIKVYDINDNAPVFVHKVFNGSVPEMSPVGTSVTKVT
AVDADDPTVSGHATVTYEVTRGGEYFTIDDSGVIYTKEPNLDRETKSTYEIVVQAKDAPG
FSGDSSTATVIIALSDINDNSPEFKHSSFHFKVPENVSVGGEVGRVKVEDIDEPQHRNTR
YSFIQGEFRDTFDIVANPYTNEGIIRPKKPLDFEAVSEYRFSIEATDPTVNLRHFKPGNP
RSVASVVIEVTDVDEPPVFRRLPYEFKVRENHAEVKTLGSVHAEDPDAAKRKIRYIQRRA
NPNGDYIRVSNTGVIQLPKPLDREFSSSYNITVAAVEILEDGRLSDRESHAHVHVIVDDV
NDNAPELVSPEEPRVCENAAPGKVIVRISAVDKETSPRGFFRYSLATEDSNFSLIENYDN
TANITVKYGQFNRELAKFHYLPVLISDNGDPDLTSTNTLLISVCKCNEKGNFTFCEERAK
QVGVSIQALVAIFICIFTIIVIALLILLRRRHKKDLSGLGRSVAEIHEQLVTYDEEGGGE
MDTTSYDVSVLNSVRKNGLKAEPAPSPYAQVQKPPGNITPGAGGMEMMIEVKKDEADNDR
DLLPYDTLHIYGYEGAESIAESLSSLGSGSSDSDIDYDFLNDWGPRFKMLAELYGSEPSE
DFVY
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttggccaccttggactcgggctacagaagaagatgagccaccttattctactt
ttctcgttgttcttggccccagcatttgctgatggaagaagtcagaaatcgacccaaaac
ctttgttcaaatgatgtcagccacaaacgccagaagagagactggatatggaaccaattg
cacatccaagaagagcttgatacacctttgccacaccatgttggcaagatcacatccagc
gtgaggaacaagaacgccaagtacatcatcgagggcgaattcgccaacaccatcttcaag
gtggaggagaccagcggggacgtgtacgccttcgagaggctggacagggagaagaaggct
gagtatgagctgacagccctgatcatcgacaggacaaacaacaggtccctggagcgcccc
tccagattcatcatcaaggtgtacgacatcaacgacaacgcccccgtgttcgtacacaag
gtgttcaatggctctgtcccagaaatgtcaccagtgggaacctcagtcaccaaagtgaca
gctgtagatgctgacgaccccacagtgtcgggtcatgccaccgtgacctacgaagtcacc
agaggaggggaatatttcaccattgatgactctggtgtgatttatacaaaagagcctaat
ttagacagagagaccaaatccacgtatgagattgttgttcaagccaaagatgcaccgggt
ttctctggggattccagcacagccacggtgatcatcgctttgtccgacatcaacgacaac
tccccagagttcaaacactcatcatttcactttaaagttcctgaaaacgtttcagtagga
ggagaagttggcagagtcaaagtagaagatattgacgaaccacagcacagaaatacaaga
tacagctttatccaaggagagttcagggacacctttgacattgtagcaaatccatacaca
aatgaaggaatcattaggccgaagaagcccctggacttcgaagcagtgtcagagtacagg
tttagcatcgaggccactgaccccaccgtgaacctgcggcacttcaagcccggcaatccc
cggagcgtcgcgagcgtcgtcatcgaggtgacggacgtggatgagccccctgtcttcagg
agactcccctacgagttcaaggtgagggaaaaccacgcagaggtgaaaactctcggctca
gttcacgccgaggaccccgacgcagctaaacggaaaatcagatatattcagcgtagagca
aatcctaatggagactacatcagggtatccaataccggagttattcaacttcccaagcct
ctggacagagaattcagctcctcatacaacatcactgtggcagctgtggagatccttgaa
gatggccgcctttctgacagagagtcccatgcccacgtgcacgtcatcgtggatgatgtc
aatgacaatgctccagagcttgtttctcctgaggaaccccgagtgtgtgaaaatgctgca
cctggaaaggtgattgtcaggatttcagctgttgacaaggaaacatctcccagaggcttc
ttcagatactcgctggccacagaagacagcaacttctccctgattgagaactatgacaac
acggctaacatcactgtcaaatacgggcagttcaatcgggaacttgccaaattccactac
ctgcctgtgctcatctcagacaatggtgaccctgacctcaccagcacaaacaccctgctc
atcagtgtctgcaagtgcaacgagaaaggcaacttcaccttctgtgaggagagggcaaag
caggttggagtcagcatacaagcactggtggcaatttttatctgcatcttcacaatcatt
gtgattgcgttgctgattctgctgagaaggaggcacaagaaggacctgagtgggctgggg
aggagcgtggcagagatccacgagcagctggtgacctacgacgaggagggcggcggtgag
atggacaccaccagctacgacgtgtccgtgctcaactccgtccgcaagaacggcctcaag
gcagagcccgctccctctccctatgcacaggtccagaaacctcctgggaacatcacccct
ggagctgggggcatggagatgatgattgaggtgaagaaggatgaggctgacaatgacagg
gatttgctgccctacgacaccctgcacatctacggctacgaaggcgccgagtccatcgcg
gagtccctcagctccctgggctcgggctcctcagactcagacattgactatgactttctc
aacgactggggacccaggttcaagatgttagctgagctgtatggatcagaaccaagtgaa
gattttgtgtattaa
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