Molothrus ater (brown-headed cowbird): 118691557
Help
Entry
118691557 CDS
T11569
Symbol
NISCH
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mate04990
]
118691557 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
mate04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
118691557 (NISCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_NISCH_C
LRR_4
PX
LRR_8
LRR_NXF1-5
LRR_9
PH_PLEKHM2
LRR_14
Motif
Other DBs
NCBI-GeneID:
118691557
NCBI-ProteinID:
XP_036246676
LinkDB
All DBs
Position
11:complement(6241346..6270840)
Genome browser
AA seq
1418 aa
AA seq
DB search
MEAAAGSEDGEEPPREARVLGSELVETYTVYIIQVSVGNHQWTVKHRYSDFHDLHEKLVS
EKKIDKNLLPPKKIIGKNSKSLVEKRQKELEIYLQTLLLKFPVTAPKVLSHFLHFHLYEI
NGITAALAEELFHKGEQLLMAGEVFTIRPLQLYAVTQQLLQGKPTCANGDAKTDLGHILD
FTCRLKYLKVTGTGGPFGTSNIQEHLLPFDLSIFKSLHQIEISHCGGKLIKGLTSSKHAL
ATLSVRFSATSMKEILVPEASEFDHWEPEDALDSSCPVTAIIPTWRTLTTLDMSHNSISE
IDDSVKLIPKIEFLDLSHNGVSLVENLQHLYNLVHLDLSYNKLTSLEGVHTKLGNIKTLN
LAGNQLERLCGLNKLYSLVNLDLSNNKIEQIDEVKNIGGLPCLEKVMLSSNPLSIIPDYR
TKVLAQFGDRASEVCLDNIVTTEKELDTVEVLKAIQKAKEVKYKLSNSDKKISEDSRLTA
ASSKSNCSSLTVRPSSPSLPRPVSSSQEIICEETVLASSFLQSSDSTPTDHTVPQRCFEI
PDSRCKIQAPASSLASCKEYGGGHHVCLEREYCAVPDPCNTIILPFNCMSYTATNQDFIQ
HLSASIVQAVQKSAPSPTENKGSPVGNSTTTDKADGYFEMGLHEGDQTFEFSTTLDTQSS
DNIAVESVDIVKILWSFSIHIHKGLRQFASCLVLTDEMLAVFEIPHQELRGNCQHIPSAL
KLTLCFPYADLIEFGFLLPEICLTLKLKNSDHCLFIVSDSQNLQDFYSCLQTCCSQHYTS
VLPSSTWYCRKANLQEFLCQLMELNCISAEDVEIKGCFPTYLVYGNKTNVQKVLHQPESA
GNNKECSKNALCSALYSSVYKSSDQSPCVVHPCWIFLTPQHLYIVKVDFSLLPGKWAGTE
ELGSVFKLNRIPLASLVLHPTHGATQQKGSFLDGHVLELLVGYRFVTAVFVLPHEKFHFL
RIYSLLRTLLQDVKTIIIFKASSKSDAVRNHAVEANRHSQAASFCKPHLTLSSLYPSELL
MQKITEDNQIPVHIHVSVSLQYVAGLKGRALVEFFHSNIAEVENEELRHLMWSSVLFYKT
PSVEVMACVLLSTKAIYFLLDDSFIHADEHQSDFWNKENSDCENSSFHLSCCFVLKLNDV
QSVNVGLFDQYFRITGHSADHIVTCLTRDSYNTHTFIQQLMAVLSLLARTPSPEPVDKDF
YSEFGSKNTGKMENYELIHSSRVKFIYPNEEEIGDLAFLVAEKMDGLTNLPSLNILLYVL
AFQVNHFEGSAQNTSSLQPKTLILTSSDLFLFDEDYISYPLPEFAKEPPKRDKYQLADGR
RIRDLDRVLMGYQTYPQALTFVFDDVQNQDLMQNLTLDHFGETDSIPKGNSKQEGSRNRE
IQWYIFIPSAESREKLISLLARQWEILCGRELPLELTG
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcgggaagcgaggacggcgaggagcccccgcgggaggcccgagtcctg
ggctctgagctggtggagacgtacacggtgtacattattcaggtcagtgttggcaatcat
cagtggacagtcaaacatcgttacagtgatttccatgacctgcatgaaaagcttgtttca
gagaagaaaatagataaaaatctgttacctccaaagaagatcattggaaaaaattccaaa
agccttgtggagaaaagacaaaaggaactggagatctacctgcaaactctgctgctcaag
ttccctgttactgcaccaaaagttttgtcacacttcctacactttcatttatatgagatc
aatgggatcacggctgcattggctgaagagctctttcacaaaggagagcagctcttaatg
gctggagaagtgttcaccatcaggcccctgcagttgtacgctgtcactcagcagctgctg
cagggcaaacctacctgtgctaatggagatgccaaaacagatctaggccatattctggat
ttcacttgtagactcaagtatctaaaggtcactggaacagggggaccttttggaaccagt
aacattcaggagcatctcttgccttttgatctgtctattttcaagtcacttcatcaaata
gagatcagtcattgtgggggaaagcttatcaaagggctgacttcatcaaaacatgccctg
gccacactgagtgttcgattttcagcaacatcaatgaaggaaatcctggtgcctgaggcc
tctgagtttgatcactgggagccagaggatgcactggattcaagttgtccagtgacagca
attatcccgacctggagaactttaacaaccttggatatgagtcacaatagcatctctgaa
attgatgattcagtgaaattaattccaaagattgagttcctggatttgagtcacaatggg
gtgtctctggtggaaaatttacagcatctgtacaaccttgttcacctggacttatcctac
aacaaacttacatcactagaaggcgttcacacaaagctgggaaacatcaaaactctgaat
ttagcaggaaatcagctggaaaggctgtgtggtcttaacaaactgtactcattagtcaac
ttggatctgagcaacaacaaaatagaacagattgatgaagtaaaaaacatcggcggcctg
ccgtgcctggagaaggtgatgttatccagcaaccctctgagcatcatccctgattaccgc
accaaagtcctcgctcagtttggagacagagcctcagaggtttgcttggataacattgtt
accacagaaaaggaactggacacagtggaagtgctaaaagctattcaaaaagcaaaggag
gtgaaatacaaactcagcaactctgataaaaagatcagtgaggactccaggctcactgct
gccagctccaaatcaaactgttcttctcttactgttcgtccttcctctccctctctgcct
cgtcctgtcagctccagccaagaaataatttgtgaagaaacagtcctagccagcagtttt
ttgcaatccagtgattcgactcctacagaccatacagttccccagagatgctttgaaata
ccagactccagatgtaaaattcaggcacctgcctcttcattggcttcatgcaaagagtat
ggtggtggtcatcatgtgtgtttggagagagaatactgtgcagtgcctgacccctgtaac
accatcatcttgccttttaattgtatgtcctacactgccaccaaccaagactttatccag
cacctttctgcctcgatagtgcaggctgtgcagaaatctgccccctctcccacagagaat
aaaggaagccctgtgggtaattccacaaccacagacaaagcagatggatattttgaaatg
ggacttcatgaaggagatcagacttttgagttcagcactactttggatactcagtcatct
gacaacatagcagtggagagtgttgacatagtcaaaattctctggagcttttcaattcac
attcataaaggactcagacagtttgcttcctgcttggttttgaccgatgagatgctagct
gtgtttgagattcctcatcaggaactgagaggaaattgccagcacatcccttctgccttg
aaattaacactgtgttttccctacgctgatctaatagaatttggctttctcctgccagag
atctgtttaactctgaagctgaaaaacagtgaccactgcttgtttattgtttcagactcc
cagaatcttcaagacttttattcctgtttacaaacgtgttgctctcaacactacacatca
gtgttaccaagctccacatggtactgtagaaaagcaaatctccaagaatttctctgtcag
ctcatggaattgaattgcatttcagctgaagatgttgaaataaaaggttgtttcccaaca
tatcttgtttatgggaataaaaccaatgttcagaaagtcttgcatcaaccagagtcagct
ggcaataacaaggaatgctcaaagaatgctttgtgttctgcactttattcttcagtgtat
aaatcttctgaccagagtccctgtgtggtccatccctgttggatatttctaacaccccag
catttgtacattgtaaaggtggatttcagcttactgccaggtaaatgggcaggcacagag
gagttgggaagtgtatttaagctgaatagaattccattggcatcacttgtgctgcatcca
actcatggtgccacgcagcagaagggttcatttttggatggacacgtgctggagttgctt
gttggatacagatttgttacagcagtgtttgttctacctcatgagaaattccactttcta
agaatctacagccttctaaggacactgctccaggatgttaagactattattattttcaaa
gcttcaagcaaatcggatgccgtaagaaatcatgctgtggaggcaaacagacacagtcag
gcagccagtttctgcaagcctcatctgacattgtcatccttatacccatctgagcttctt
atgcagaagataacagaagacaaccagattcctgttcacattcatgtttctgtgtctctg
cagtatgtggctgggctgaagggaagagccctggttgaatttttccatagcaacattgca
gaggtggaaaatgaagagttgagacacctcatgtggtcttcagttctgttttacaagact
cccagtgtggaagtgatggcttgtgtgcttctctcaacaaaagctatttactttctgttg
gatgattccttcattcatgcagatgagcaccagtcagatttttggaacaaagaaaactca
gactgtgaaaacagttctttccatctctcttgctgctttgtgctaaaacttaatgacgtg
cagtcagtaaatgttggcctgtttgaccaatacttccgaattactgggcattctgcagat
cacattgtcacctgcctgacaagagacagttacaacactcacaccttcatacagcagctt
atggcagtcctgtcactgcttgcacgcactccttcacctgaaccagtagataaggacttc
tactctgaatttgggagtaaaaacacaggaaaaatggagaattatgaactgattcactct
agcagagtaaaatttatttatccaaatgaagaggaaattggggaccttgcttttctagtg
gcagagaagatggatggtttgaccaatcttccatccctcaacatccttctgtatgtgttg
gcatttcaagtaaatcactttgaaggatctgctcagaacactagttcacttcaacctaaa
acactgatattgaccagctctgatttgttcctctttgatgaagattatatcagttaccca
ctacctgaatttgctaaggagccaccaaagagagacaagtaccagcttgcagatggaaga
cgaatccgggatttagacagagtgctcatggggtatcagacatatccacaggcccttaca
tttgtgtttgatgatgttcagaatcaggacctgatgcagaatttaacactggatcacttt
ggagaaactgatagtatcccaaaaggaaattccaaacaagaaggcagcaggaacagagag
atccagtggtacatttttatcccaagtgcagaaagcagggagaaattaatttcattgctt
gcaagacagtgggagatcctgtgtggtagggaattgcctttggagctcactgggtag
DBGET
integrated database retrieval system
