Molothrus ater (brown-headed cowbird): 118691650
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Entry
118691650 CDS
T11569
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mate01001
]
118691650 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mate04121
]
118691650 (DCAF1)
Enzymes [BR:
mate01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118691650 (DCAF1)
Protein kinases [BR:
mate01001
]
Serine/threonine kinases: Other
Other
118691650 (DCAF1)
Ubiquitin system [BR:
mate04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118691650 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
LisH
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
118691650
NCBI-ProteinID:
XP_036246876
LinkDB
All DBs
Position
11:4636740..4685528
Genome browser
AA seq
1504 aa
AA seq
DB search
MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMTVDGEQEVSADMEISFHLD
SSHKTSSRVNSATKLDDGGLRRSKSGKQHERDGFRKAKQKLGFSSSEPERMFVELSNSSW
SEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLKR
TNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQ
DAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGLR
RLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSLQ
RTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQLI
SIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIILG
VAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLAK
MWNVVQSNNGIKVLLSLLSVKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSC
QIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRIT
FPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVAAAASPVTLPRTPR
IANGISARLSSHTAVGSTATSVHAQARPSASQGPPALPGPSYASNSPLIGRISFVRERPS
PCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVAT
CPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPISV
FREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSR
DGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYDI
QTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISGV
FHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEER
MRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVCR
LYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENNE
NAGEDGENDFSPSDDEEIANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDIIL
SLNE
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcactactttgcttgagcaa
tgggagaaagaacatggcagcgggcaagacatggtccctattctcaccagaatgtcagag
ctgatcgagaaggagactgaagagtaccgcaagggggaccctgacccgtttgatgaccga
cacccaggtcgggcagaccctgagtgcatgcttggtcacttactgaggatactcttcaag
aatgatgatttcatgaatgcgctagtgaatgcttatgtgatgacaagcagagaacctcca
ctaaacactgctgcctgcaggcttctgctggacatcatgccgggactggaaacagctgtt
gtcttccaggaaaaggaaggcatagttgagaatctctttaaatgggcacgagaggctgat
cagccgctaaggacctatgcaacaggactgttgggaggagctatggaaaaccaggacatt
gctgcaaattacagggatgagaactcccagttggtggctctggtgctccgtcggctacga
gagttgcaggtcactgaaatgaccacaaaacaggaaaacaagcgccccagtcctcggaaa
gtgccctcagatcctctgctgcccctcgatgaagaggctgtggatatggattatggggag
atgacagtagatggagagcaagaagtttctgctgatatggagatctcctttcatctcgat
tcaagtcataagaccagtagcagagtaaactctgctacaaagctggatgatgggggactg
agaagaagcaaatcagggaaacagcacgaaagagacggcttccgcaaggccaagcagaag
ctgggcttctcctcctcggaaccagagcggatgtttgtggaactgtccaacagcagctgg
tcagaaatgtccccgtgggtgattggcactaattacacactttaccccttgactcctgcc
atagagcagaggctgattcttcagtacctgactcccctgggggagtaccaggagctgcta
cccatctttatgcaactgggatcaagggagctgatgatgtactacattgatttgaagcga
accaacgatgtgctgctcacttttgaagcccttaagcatttggcatcattgctgctgcac
aacaagtttgctacagagtttgttgctcatggaggagtgcaaaagttgctggagattcct
cgtccttccatggcagccacaggagtgtccatgtgcttgtattacttgtcgtacaatcaa
gatgctatggagagggtgtgcatgcacccccataatgtgctttcagatgtggtgaactac
accttgtggctgatggagtgctcccacgcctcgggctgctgccatgccaccatgttcttc
tccatctgcttctccttccgtgctgtcctggagctctttgataggcacgatgggctgagg
cgtctggtgaacctgataagcactctggagatcttaaacctggaagaccaaggagccctg
ctgagtgatgatgagatctttgccagccggcagacggggaagcacacctgcatggcgctg
cgccgctacttcgaggctcacctcgccatcaaactggagcaggtgaagcagtcgctgcag
cgcaccgagggcggcatcctggtccacccacagcccccctacaaggcctgctcctatact
catgagcagattgtggagatgatggagttcctgattgagtatggtccagcacagctttac
tgggagccagcagaggtttttctcaagctgtcttgtgtccagctcatgcttcagctcatt
tccattgcctgcaactggaagacatactatgcaaggaatgacacagtacgatatgctttg
gatgtactggccatcctgactgtagtacctaaaatccagttgcaactggcagaacctgtg
gatgtgttagatgaagctgggtctactgtttccactgtgggtattagtatcatccttgga
gttgctgagggtgagtttttcatccatgatgctgagattcaaaaatcagcccttcagatc
atcatcaattgcgtgtgtggcccagataaccggatctccagcatcgggaagttcatctct
gggactcctcgtcgaaagcttcctcaggcccccaagagcagcgagcacacgttggccaag
atgtggaatgtggtgcagtccaacaatggcatcaaggtgctgctgtcgctgctgtctgtg
aagatgccgatcactgacgcggatcagatccgggccctggcctgcaaagccctggtgggg
ctgtcgcgcagcagcaccgtccggcagatcatcagcaagctgcccctgttcagcagctgc
cagatccagcagctgatgaaggagccggtgctgcaggacaagcgcagcgagcacgtcaag
ttctgcaagtacgccgccgagctcatcgagcgcgtctcggggaagcccctgctcatcggc
accgacgtctcgctggcgcgcctgcagaaggccgacgtggtggcccagtcgaggatcact
tttcctgagaaggagctgctgctgctgattcggaaccacctcatctctaagggcctcggg
gaaacggcgtctgtccttacgaaagaggctgacctgcccatgactgcagcatctcactct
tctgccttcacccctgtcgcagccgctgcctctccggtgactctgcctcgcactcctcgc
atagctaatggcatctcggcccgtttgagtagccacactgctgtaggttccactgccacc
tctgtccatgctcaggcaagaccgtctgcatcccaaggtccacctgcccttccaggtcct
tcttacgccagcaactctcctctgattggcaggattagctttgtcagggagaggccgtct
ccctgcaacggcaggaaaatcagagtgttgcgacaaaaatcggaccatggcgcctacagc
cagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacgctggac
agtataatcacagagtaccttagggagcagcacgcccgctgcaagaaccctgttgccacc
tgtccccctttctctctctttactccccaccagtgtcctgagccaaaacagaggcgccag
gcgcccactaactttacctcacggctgacccgcagggcggccttcccgaagtacggaggg
gtggatggtggctgctttgatagacaccttatatttagcaggttccgtccaatttctgtg
ttcagggaagcaaatgaggatgagagtggctttacctgttgtgcattttctgcaagagaa
cgattcctaatgctgggtacttgcacggggcagctgaagctctataatgtgttcagtgga
caggaggaggccagttacaactgccataactctgccatcacgcaccttgagccatccagg
gatggatctttattgctgacatctgctacatggagccagcctctgtctgcattgtgggga
atgaagtctgtctttgatatgaagcattccttccctgatgaccactatgtggagttcagc
aagcactctcaggacagggtcattggcacaaagggagacattgcacatatctatgatatt
cagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaagaag
aactgtgccacctttaaccccactgatgaccttgtcctaaatgatggtgtcctctgggat
gtcagatcagcacaagccatccacaagtttgacaaattcaacatgactatcagtggtgtt
ttccatcccaatgggctggaggtcattgtcaacactgaaatttgggatctccgaactttc
catttgttacacacagtacctgcactggatcagtgccgtgtggtcttcaactatactggc
acagtgatgtatggagctatgttgcaggcagatgatgaggatgaccttctggaggagaga
atgagaagtccttttggctcttctttcaggacatttaatgcaactgattataaacctata
gctaccatagatgtaaagaggaatatctttgacttgtgcacagacagcaaggactgctat
ctggctgtcattgagaaccagggcagcatggatgccatgaacatggacaccgtgtgcagg
ctctatgaagtgggccggcagcggctggcagaagatgaggaggatgaagaagaagatcag
gaggaagaggagcaagaagaagaagatgatgatgaagatgatgatgacacagatgacctt
gatgaactagatacagaccagctgctggaggctgagctggaggaggatgagaacaatgag
aatgctggtgaggatggagaaaatgacttttctccctccgatgatgaggagattgccaac
ctcctggaagagggagatgagggagaagatgaagattctgatgctgatgaggaagttgag
ctgattcttggagataccgacagctccgataactcagacctggaggacgacatcatcctg
tccctgaacgagtga
DBGET
integrated database retrieval system
