Molothrus ater (brown-headed cowbird): 118692110
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Entry
118692110 CDS
T11569
Symbol
DCHS1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118692110 (DCHS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mate04515
]
118692110 (DCHS1)
Cell adhesion molecules [BR:
mate04515
]
Cadherins
Cadherin related
118692110 (DCHS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_CELSR2_9th
RET_CLD1
PepSY
CADH_Y-type_LIR
Sharpin_PH
Motif
Other DBs
NCBI-GeneID:
118692110
NCBI-ProteinID:
XP_036247619
LinkDB
All DBs
Position
2:69673..114138
Genome browser
AA seq
3266 aa
AA seq
DB search
MEQMKRSTMLLLELLILGGLRAAMGSAVLGTLDLQIDEEQPAGTIIGDISAGLPPETSAY
MYFISAQEGSGVSTDLGIDENTGIIKTARVLDRETRDRYSFIAVTPEGITVEVNIQVNDI
NDHAPAFPKQHSTFQIPEHTPIGSRFPLDPAFDADSGLLNTQGYTIKGGNVGQAFRLETR
RGPNGVLYLDLVVSNILDRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFN
QSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDARTGVIKL
NKGLDYEVRKVHELVVQARDKAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS
EGAQPGQYVARISVSDPDYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERD
SYDLRVTATDSGTPPLRAESAFVLQVMDVNDNPPLFDQQEYKQSIPEVVYPGSFVLQVTA
RDKDQGPNGEVRYSILHGRDTHSSWFTIDPATGIITTAAPLDYEKDPQPQLTVLATDRGT
PALSSSAVVYVALQDVNDNEPVFRSNFYNVSLKENTPVGTCFLQVTATDADSGAFGSLSY
SIGSGIGSVIPTQFSIDKHSGQLCTVQPLDRDEGTAAYDFTITAVDGGGLNSMVYVKVFL
EDTNDNRPVFYPLEYAASISTQSMPGTAVLRVTAHDKDEGLNGRVTYRIVRGNSPPLFSL
NKDTGVISLSWSLNGKANTLVQLVISAQDGGGLQAQPNARVNISIVEGTVSPPVFEQAQY
FFSVPEDMPQGTTVGAVQAQNPPGHADDIFYSISSGDPHGYFSIDSASGQLRTSLPLDHE
SQAVLVLDVQARSGSPPAYSNTRVKISVSDVNDNAPAFPTPSDSILLPEATEPGTTVYTL
QAEDRDSGANGQVAFELLSGGEGTFVVEHASGAVRLLGALQYEAISAYSLAIVARDSGVP
QLSSTFTLLVHVQAEDDNGPIFDTLTYRVEVQEGVPVSTRFLQVRALAHDVEPSELTYHL
RADGDAASFGIVPESGWLYVKSALDRETRDLYVLTVLASVGGTGAAADARKTGTSTVRVS
VTDENDNSPRLSEERYFFTVSENQAPGSTVGRVMASDRDAGQNSRLTYRLLQHDPNFLIH
TQTGEVSTKHSLDREQQSNFQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAFLHVGSG
QELTVQVLEEKPSGLLVASLQAKDPDEGENGTIIYSLIGAWAERFSLHVATGELRTAAVL
RRAERAEYLFTVTASDRGTAPRSTSAIVRVQVLPSSRVLPRPDATVLTLHPLEGVKPGSV
IGSVAPPDAPARGQLTYTVVGGGGDGTFVVDSVTGEIYAARELDYEAGARHVLQVSAEDT
QHGYPSSRLVLVHIHVQDCNDQAPTFPEDPITIVVPENAQAGSSIFTFQALDGDGVGPNS
QVRYALLHLEPPGAPFQLDGRSGQLTLRQGLDREAAASFLLVVEATDQARNVSQRRSAAV
TARVFVTDENDNAPVFLSPASVSVMEDQPTGFVALHVVAQDSDLGENGRVSYSLRAGNTD
GRFHLNPSTGALSIVRALNREEVAQHNLTVVATDHGFPRLSATQLLSVLVLDVNDEAPVF
EKPEYQAHIMENLPAGSPVLQVLATDRDLGANGQVSYGGLSGGPFSIHPQTGLIVTTRPL
DREEQEQHVLTVYARDAGLPPSLTKATVWVTVGDENDHAPLLERESCSVEVPENQSRVAL
YTLRATDPDGGENGRLEYRVAGGDLGQDFSLDPVSGVLSTAHALDREQIASYSLTVVVQD
HGSPPRSATMSVNVQVLDLNDNAPSFAQASYTVEVPEDLPVGALVLQLVAEDPDEGTNGQ
VSYYLGNESLGMFQVELQSGRLRSTQALDRERQPSYSFLARAVDSAPWEPRSAAVRVTIV
VRDVNDHVPAFLHSPLTVNLSRHTPLKQVVATMRAEDRDAGANASILYRFATPSSAFAIN
SYTGDIQLLQPLGALSQRQRTLFVLAMDLGQPALSSTGVVVIHVQEEPYRGLRFPRSTRD
VALAENAAPGTEVVSVQAMHTGGSSGHITYSIISGNERNAFLIQPSSGTISVQDSSSLDF
EASPRLRLVIQAETAASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQGYDSPVIQVL
ADDLDQGVNGQVTYAINQSLPMPGLYHIDPQTGTITTAAILDREIWSQTRLVVTAMDRGT
PPLMGSATLTVVVMDINDNSPTIPVPWEIRVPENTLLGTQIAQLTGNDVDSGPALSYTLL
LEGDVADTFGVLRYGGHVSLTGPLDHEQRSRYTLTLRASDTRHETEANLTVLVEDVNDNV
PTFTQGFYQVLLPEHTPAGSVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPSNGTLFT
TRQVEFNASQPTLDLVVEARDHGSPSLSSWATVQLQVLDVNDHSPRFQEPCYNASVPEDL
RPGTTVLMLEAGDADLSRENAGFDYTIVSGNGGNAFQVESRVAQAGGQLRTQGALVLVEP
LDFEAIPVYNLTVAASDRGLPQRSATVPVLITVQDVNDNPPVFGRAEYRAAVSEAALPGT
ELLRVAAHDADSGPRGRVHYTISSGDQHGLFQLHESTGALSLARPLDREAQALHTLVVRA
TDTPGGHFALVPVAIEVKDINDNKPYFPVEVLSASIRENLPPGTLVTTLRAVDADSGAFG
ELRYVVLEQALGDPSMGDGRDAFAVNGSSGELRSRLTFDYERAKAFQLLVRAIDAGNASA
TVTVRVLVTGEDEYDPIFLSPSFNFEVPEGARKGQSIGRVLATDEDEGVDGVVLYTLAKP
SPYFAINQTTGSIYLRVDSQPQAGAGRTKREPREMSLEVQARSPLPASRVASAQVTIDVT
HTSFGLAPDLNLLLVAVAASLGVVVVLAAVAIVLALVRSRQRRGHKKAEAEGALARAQSG
SLQKLGREEPALPGAEHIYHQALPGYGTEPAGPYTRGGSLDPSHSSGRGSAEAAEDDEIR
MINEYPRVASITASMQEHIAARGPDSGIQQDADQLSDISCEPAALESAQWFKSKKGSGLL
LPGPPLQLYREDGGGSAFLGVRCGLSVSSQPQDYTFPEDGKPSVEGSLTAIVASDEELRG
SYNWDYLLNWCPQFQPLASVFTEIARLKDESSLRKPFPAKPKAEPKPRIDPPPLITSVAH
PGAKSVPPKPPPGRTFPHPSSLRRSPISHEGSISSSAMSPSFSPSLSPLAARSPVVSPFG
ISQGPSTSTISAEHSLEPPEEAELRI
NT seq
9801 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaatgaagaggtcaacaatgcttctgctggagctgcttattcttgggggcctg
agagcagcgatgggctctgcagtcctgggcaccctggatctacaaatagatgaggagcag
ccagctggcaccatcattggggacatcagtgctggcctaccccctgaaactagtgcctac
atgtatttcatctcagcacaggagggcagtggtgtctccactgacttggggatagatgag
aatacagggatcatcaaaaccgctcgtgtcctggaccgggagactcgggaccgctacagc
ttcattgctgtcaccccagagggcatcacggtagaggtgaacatccaagtgaatgacatc
aatgaccatgccccagcgtttcccaagcagcacagcacctttcagatcccagagcacacc
cccattggcagcaggtttcccttggacccggcctttgatgccgacagtggcctcctgaac
acacaaggctacacaattaagggagggaatgtggggcaggccttccgcctggaaacgcgc
cgaggacccaatggggtcctgtatttggacctggtggtcagcaacattctggatcgggag
aaccgttcctcatactccctgctgctggaagcctacgatgggggctctccgccccggagc
acccagatgacactggacgtgtccattcaggacatcaacgacaacgcccccagcttcaac
cagagccgctatcacacgctcatttcagagaatctgaaacctggcagcagcatcctgcag
gtctttgcctctgacgcggatgaaggtgacaacggggatgtgatttacgagatcaaccga
cggcagagcgatcctgaccagtacttcaccatcgatgcccggactggagtcatcaagctc
aacaagggtctggactatgaagtgaggaaggtgcatgagctggtggtgcaggcaagggat
aaggctgtccatcctgaggtcaccacagcctttgtcactatccacgtgcgtgactacaat
gacaaccagcccaccatgactatcatctttctgagtgaggatggctccccacaaatctcc
gagggagcccagcccggacagtacgtggcacgcatttctgtttccgatcccgactatgga
gagtattccaatgtcaatgtcacactggagggaggagatggcaagtttgccctcactacc
aaggacaacataatctacctgatctgtgtggaccaacttctggatcgggaagaaagagac
tcctatgatctgcgggtgacagctactgactcaggaacgcccccgctccgggcagaatca
gcctttgtgctgcaggtgatggatgttaatgacaatcccccgctctttgaccagcaggag
tacaagcagagcatccctgaggtggtgtacccaggcagctttgtcctgcaggtgacagct
cgtgacaaggaccagggtcccaatggggaggtgcggtacagcattctgcatggccgtgac
acccactccagctggtttaccatcgaccctgccactggcatcatcaccactgctgccccg
ctggattatgaaaaggatcctcagcctcagctcactgtgctggccacagaccggggaacc
cctgccctctcttcctcagctgtggtgtacgtggccttgcaggatgtcaatgacaatgag
ccagtgttcaggagtaacttctacaacgtgtccctgaaggagaacacccctgttgggacc
tgcttcttgcaggtgacagccacagatgcagacagtggtgcgtttggctccctttcctac
tccatcggctctggcatcggcagcgtcatccccacgcagttcagcattgacaagcactcg
gggcagctgtgcacggtgcagcccctggaccgtgatgagggcacggctgcctacgacttc
accatcactgctgtggatgggggcggcctgaactccatggtgtacgtgaaggtgttcctg
gaggacacgaatgacaaccggccagtgttctacccgctggagtacgctgccagcatcagc
acccagagcatgccgggcacagccgtgctgcgcgtcactgcccacgacaaggacgagggc
ctcaatggcagggtgacataccgcatcgtccggggaaactcgcccccgctcttctccctc
aacaaggacacaggtgtcatttctctgtcatggtctctgaatggcaaagccaacaccctg
gtgcagctggtgatctctgctcaggatggggggggcctgcaggcacagccgaatgcccgg
gtaaacatcagcatcgtggagggcacagtctcaccccctgtctttgagcaagctcagtac
ttcttcagcgtgcccgaggacatgccgcagggcaccactgtgggggctgtccaggcccag
aaccctccaggtcatgctgatgacatcttctattccatctcctcgggggaccctcatggc
tatttctccattgactcggcctcggggcagctgcgcaccagcctgcctctggatcacgag
tcccaggcagttctcgtcctggatgtccaggcccggagcggttccccccctgcctacagc
aacacgcgggtgaagatctctgtgtcagatgtgaatgacaatgctccggcattcccaact
ccctctgactccatcctgctgccagaggccacagagcccggcactacagtgtacaccctg
caggctgaggaccgtgacagcggtgccaatggacaggtggcctttgagctgctctcgggg
ggtgagggcacctttgtcgtggagcatgcctcgggggccgtgcggctcctcggggccctg
cagtacgaggccatctcagcctacagcctggccatcgtggcccgggacagcggcgttccc
cagctcagctccaccttcacgctgctggtgcacgtgcaggccgaggacgacaacggaccc
atctttgacactctcacctaccgcgtggaggtgcaggagggtgttcccgtctccacccgc
ttcctgcaggtgagggccctggcacatgatgtggagccctcggagctcacctaccacctg
cgtgcggatggggatgctgccagtttcggcatcgtgcccgagagcggctggctgtacgtc
aagagtgccctggaccgggagacgcgggacctgtacgtgctgacggtgctggcctcggtg
ggaggcaccggggccgcggcggacgcgcggaaaaccggcaccagcaccgtgcgtgtcagc
gtcaccgatgagaacgacaatagcccgcggctgagcgaagagcggtacttcttcaccgtg
tctgagaaccaggctcctggcagcaccgtgggaagggtgatggcaagcgaccgggacgcc
gggcagaacagccggctcacctaccgcctgctccagcatgaccccaactttctgatccac
acacagacaggagaggtcagcaccaagcacagcttggatcgggagcagcagtccaacttc
cagctgctggtgattgtgcaggatgggggagcaccgcctcgcagtgccaccggaaccatc
tatgtcactgtgctggatgagaatgacaacgctcctgctttcctgcacgtgggcagtggt
caggagctaactgtgcaggtgctggaagagaagccatcgggactcctggtcgcctccctg
caggccaaggaccctgacgagggggagaacgggaccatcatctactccctgataggggcc
tgggcagagcggttcagcctgcacgtggccacgggcgagctgcgcacggccgcggtgctg
cgccgggccgagcgcgccgagtacctcttcacagtgacagccagtgaccgtggcacagcg
ccccgcagcacatcagccatcgtccgtgtgcaggtgttgccatcctcccgtgtgctgccc
cggcctgatgccactgtgttgaccctgcatcccctcgagggggtcaagccggggtctgtg
attggttcagtggcccccccggacgcccctgcacgaggacagctgacctacacggtggta
ggaggtggtggggatggcacctttgtggttgatagtgtgacaggggagatttacgctgcc
cgtgagctggactatgaggctggagcacggcacgtgctccaggtgagtgctgaggacacg
cagcacggctatccctccagcaggttggtgctggtccacatccacgtgcaggactgcaat
gaccaggcacccaccttccccgaagaccccattaccattgtggtgcctgagaatgcccag
gctggctcctccatcttcaccttccaggcgctggatggggatggggtgggccccaacagc
caggtgcgctatgctctgctgcacctggagccgcccggagcccccttccagctcgacggc
cgctcggggcagctcaccctgcgccagggcctcgaccgcgaggccgccgcctccttcctg
ctggtggtggaggccacggaccaggcccggaatgtcagccagcgccgctcggccgccgtc
acggcccgcgtgttcgtcactgatgagaacgacaacgcgcccgtcttcctctcgccggcc
agcgtcagcgtcatggaggaccagcccacgggcttcgtggcgctgcacgtggtggcccag
gacagcgacctgggagagaacggccgcgtgagctactccctgcgagcaggcaacactgat
ggccgcttccacctgaaccccagcactggtgccctctccatcgtgcgggccctgaaccgg
gaggaggtggcgcagcacaacctgacggtggtggccacagaccatggcttcccacgcctc
tcggccacacagctgctgtccgtgctggtgctggacgtcaatgacgaggctcctgtcttt
gagaaacccgagtaccaggcccacatcatggagaacctgccggccggcagcccggtgctg
caggtgctggccacggaccgcgatctgggtgccaatgggcaggtgtcctatgggggtctc
tccggagggccattctccatccacccacagacggggcttattgtcactacgcgtcccctg
gaccgggaggagcaggagcagcacgtgctgacagtctatgcgcgggatgccggcctgccg
cccagcctcaccaaggccacagtgtgggtcaccgtgggggatgagaatgaccatgcaccc
ctcctggagagggagtcctgctccgtggaggttcctgagaaccagagtcgtgtggcactc
tacaccctgcgggccactgatcctgatggtggggagaacggacgcctggaataccgggtg
gcaggtggagaccttgggcaggatttcagcctagaccctgtctccggtgtcctctccact
gcacatgccctcgatcgagagcaaattgcttcctacagcctcactgtagtggtgcaggac
cacggctccccgccacgcagtgccaccatgtcggtgaatgtgcaggtgttggacctcaat
gacaatgcccccagttttgctcaggccagctacacggtggaggtgccagaggacttgccg
gtcggtgccctggtgctgcagctggtggctgaagacccggatgagggcaccaatgggcag
gtctcctactacctgggcaacgagtcgctgggcatgttccaggtggagctgcagagcggg
cgcctccggagtacgcaggccctggaccgggagcgccagcccagctacagcttcctggcc
agggcagtggactcggcgccgtgggagccccggagcgcggctgtgcgcgtcaccatcgtg
gtgcgggacgtcaacgaccatgtgccggccttcctgcacagcccgctcaccgtcaacctg
tcccgccacacgcccctcaagcaggtggtggccaccatgagggccgaggacagggacgca
ggggccaatgcctccatcctgtaccgctttgccacccccagctccgcctttgccatcaac
tcctacacgggggacatccagctgctgcagcccctgggcgccctcagccagcgccagcgg
acgctcttcgtgctggccatggacctggggcagccggcgctctcctccacaggggtggtg
gtgatccacgtgcaggaggagccctaccgcgggctgcgctttcctcgcagcaccagagac
gtggccctggctgaaaatgctgccccaggcactgaggtggtgagtgtccaggccatgcac
acagggggctcctcggggcacatcacctacagcatcatcagtggcaatgagaggaacgcc
ttcctgatccagcccagctcaggtaccatctcagtgcaggactccagtagcctggacttc
gaggccagcccccgactgcgcctcgtgatccaggcagagactgcagcttcctttggcttt
atggccatcaacctcaacctccaggatgtgaacgacaacctgccccgcttccagctgcag
aactatgtggcattcatctgggagtcacagggctatgactcacctgtcatccaggtgctg
gcagatgacctggaccagggagtgaatgggcaggtgacttatgccatcaaccagtccctg
ccaatgccgggcttgtaccacattgaccctcagactggcaccattaccactgctgccatc
ctggacagagagatctggtcccagacacgcctggtggtgacagcgatggaccgagggaca
cccccgctgatgggctcggccacgctgaccgtggtggtgatggacatcaatgacaatagc
cccaccatcccggtgccctgggagatccgtgtccctgagaacacgctgctgggcacccag
atagcccagctgactgggaacgatgtggactcggggccagcactgtcctacacgctgctg
ctggagggggacgtggcagacaccttcggggtgctgcgctacgggggccacgtgtccctg
acggggccgctggaccacgagcagcgcagccgctacaccctgaccctgcgcgcctccgac
acgcgccacgagaccgaggccaacctcactgttctcgtggaggatgtgaatgacaacgtg
cccaccttcacccagggtttctatcaggtgctgctgccagagcacacacctgctggcagt
gtcatcctcactgtgagtgcaaccgaccccgactcagggagcaatggggacatcaccttc
cacctggctgtgcccagccctgatgttgccatcgaccccagcaatgggaccctcttcacc
acccggcaggtggagttcaacgccagccagcccaccctggacctggtggtggaggcccgc
gaccatggctctcccagcctctcatcctgggccacagtgcagctccaggttctggatgtg
aatgaccacagcccccgcttccaggagccgtgctacaacgccagcgttcccgaggacctg
cgcccaggcaccaccgtgctaatgctggaggcaggcgacgccgacctctcccgggagaac
gccggctttgattacaccatcgtcagtggcaacggtggcaacgccttccaggtggagagc
cgggtggcccaggccggggggcagctccgcacgcagggagccctcgtgctggtggagccc
ctggacttcgaggccatcccggtgtacaacttgacggtggcggcctcggaccggggcctg
ccgcagcgcagcgccaccgtgcccgtgctgatcacggtgcaggacgtcaatgacaaccca
cccgtgttcggccgggctgagtaccgtgcagcggtgagcgaggccgcgctgcccgggacc
gagctgctgcgcgtggccgcccacgacgccgactcagggccgcgcggccgtgtgcactac
accatcagctcgggtgaccagcacgggctgttccagctgcacgagagcacgggcgccctg
agcctggcgcggccgctggatcgggaggcccaggcgctgcacacgctggtggtgcgggcc
acggacacgccgggcgggcactttgcgctggtccccgtggccattgaggtgaaggacatc
aacgacaacaagccgtacttcccggtggaggtgctgagcgccagcatccgggagaacttg
ccccccggcacgctggtgaccacactgcgtgctgtggatgccgacagcggcgcctttggg
gagctgcggtacgtggtgctggagcaggcactgggggaccccagcatgggggacggccgg
gatgcctttgctgtcaatggcagctctggagagctgcgctcccgcctcacctttgactac
gagcgagccaaagccttccagctcctggttcgggccatcgacgccggcaatgcctcggcc
actgtgactgtgcgggtgctggtgacgggggaagatgagtatgatcccatcttcctgagc
ccctccttcaacttcgaagtgcccgagggtgcgcgcaaagggcagagcatcgggcgggtg
ctggccacggatgaggatgagggggttgatggtgttgtgctgtacaccctggcaaagccc
tcaccgtactttgccatcaaccagaccacgggctcaatctacctgcgtgtggacagccag
ccccaagccggggctgggcgcaccaagagggagccacgggagatgagcctggaggtgcag
gcccgcagcccgctgcctgcttcccgcgtggcctctgcgcaggtcaccattgacgtcacg
cacacctcctttggcctggcacctgacctcaacctcctgctggtggccgtggccgcctcg
ctgggtgttgtggtggtgctggccgccgtggccatcgtgctggccctggtgcgctcccgg
cagcgccggggccacaagaaggcagaggcagagggggcactggcccgtgcacagagcgga
tccttgcagaagctgggccgtgaggagccagcgctgcccggggctgagcacatctaccac
caggcactgccagggtatgggactgagccggcggggccctacacgcggggcggctccctg
gacccctcgcattccagtggccgtggctctgctgaagccgctgaggatgacgagatacgg
atgatcaacgagtacccacgcgtggccagcatcacagcctccatgcaggagcacattgct
gcccgtggccctgactctggcatccagcaggatgctgaccagctctccgacatctcctgt
gagccagctgcgttggagagtgcccagtggttcaagagcaagaagggctctgggctactg
ctgccggggccacccctgcagctgtaccgtgaggatgggggaggcagcgccttcctgggc
gtccgctgcggcctcagcgtctcctcacagccccaggactacaccttccccgaggacggc
aagccctccgtggagggctcgctcaccgccatcgtggccagcgatgaggagctccgcggc
agctacaactgggattacctgctgaactggtgtccccagttccagccgctggccagtgtt
ttcacggagatcgcccgcctcaaggatgagagctccctgcgcaagcccttcccagccaag
cccaaggcagagcccaagccccgcatcgaccccccgcccctcatcacctcagtggcccat
ccaggtgccaagtctgtgccccccaagccgccaccaggcaggaccttcccgcacccgtcc
tccctgcgccgctcgcccattagccacgagggctccatctcgtcctctgccatgtcgccc
agcttctccccatcgctgtccccgctggccgcccgctccccggtggtctcgcccttcggc
atctcacaggggccatccacctccaccatcagtgctgagcactcgctggagccccctgag
gaggccgagctcaggatttag
DBGET
integrated database retrieval system
