Molothrus ater (brown-headed cowbird): 118692431
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Entry
118692431 CDS
T11569
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mate01002
]
118692431 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mate04121
]
118692431 (USP42)
Enzymes [BR:
mate01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118692431 (USP42)
Peptidases and inhibitors [BR:
mate01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118692431 (USP42)
Ubiquitin system [BR:
mate04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118692431 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
118692431
NCBI-ProteinID:
XP_036248131
LinkDB
All DBs
Position
16:7017778..7036154
Genome browser
AA seq
1334 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPTEDPNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGASSKQPAFMGPRLPPHMIKSSSRLNGNGPLKEDPSTVGVAVKRPSS
APPTACVQNWAISRPSMADPSKAQKITISIHNKLPPRQAVPQAECPSSAVEEEDLKPLPS
ATITNSSAAEPTSNLSTVSVATNVSKQEVPDEIFVEPAVNGNPKLCSDNVVPYGAEPSGK
CEESKGLFKRHCNVISSNGILIGKVVRTLHNSHSSCQNAEERSQHELPKIDSLNGAISLD
NEYKENGLKLDDSTCQVQPVKPSEIFFSKANGVLEAMPKALSPDPQGILESLTYSQLNSL
SEEKSVSGPQKSSDKDGVTDTVVMEALFAYEESRKVPSNFSCEVEKLFTQSDSETIFTKE
EVAESIITKADNAHLNINGQHKVRKKSLDTEGEFLGQCESEDIRDKDKLRRSKEPELISK
ENPLYIKGSPESKEKLGQISSIKPDIECSSKKLASLDITDKCQDTKDISNNYVAVPPVND
SSITKLDKVLESQFSRADEGLSNKTCEDDDKHMKKNKKKIHDSKRTDKEHYRRKRESSDT
EEKERQTRNKPDDHSHRRRSSHSMETNKQSRHKQEYCSESKYRSSHNERNSPSNGRSSGK
YSRYRSRSRERTDPDRNRYYYSKGDRPWIRDRYYQDEPRRWDKCRYYSDYYSSHGTRDGR
ERRSSHCDKDYDKLSQAYSRSHKDYHCKSRWAHSTLSREEDMHHFSSHRANFHHCSVPQQ
HSEKYPRERHALPPGSAHSSFEDSSRENEKEKLRNGKRKYSHQEESGSDIEKKCRKTDDQ
RIKKYKKVKKKKKSKDKHREKDYKLYDLDCSVLHFDNDNRKHKKKKKKKKHDRNLKDLLE
YLDPRFQKKTWEKKEESRPPDDHLCEQYRNQGSKQPYKEEKPSGAGDSKKYSSMAATEYV
RDVELTDESLQYSD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcttcctcaagacgctct
gacaaatctatgaaaccccgtactaaaaaaatgacgtctcgcactgcaagtttgggccgg
gtacctcctacagaagatccaaacaaagtctctgtggataaaggtcctggggggcatatt
tattgtagatcatctcaaaaatcaaagccttttgcccagagagatctagttgttaatgat
gggattgctccgccacaaagaattctttttccacctgagaaaatctgtatggattggcag
caaacacaaagtgttggagttggactgcagaacctcggcaacacttgtttccttaattct
actctccagtgtttgacctacacgcctcctcttgccaattacatgctttcactcgagcac
accaagtcatgtcatgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
caggtcctgtgttgctctaataatgctatcaaacccacatctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttacagaaagcttgcttgaatggaagcaccaaattagacagatcttct
caagccaccacacttatttatcagatatttggaggatatctaagatctcgagtgaagtgc
ttgaactgcaaagcagtgtcggacacgtatgagccatttctcgacgttactttggatata
aaggcagttacatctgtcaccagagctctagaacagtttgtgaaaccggaacagctggat
ggtgaaaacagctataagtgtagcaagtgtaaaaagatggttccagcatcaaagagatac
acgatacatcgctcttccaatgttctcacaatatcactgaaaagatttgcaaattttaca
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcatatatg
tcccaatctattggagaacccctcatctatgctttgtatgcagttcttgtacatagtggc
ttcaactgtaatgctggacactatctctgcttcataaaggctggtaatggactttggtac
cgaatgaatgatgcctcagtagagctttctgatatcaaaacagttctcaatcagcaagct
tatgtacttttctatatcaggcgctatgacctgacgctgggggagcgagcgttctacctg
cccgcgccctcctacccgcgctccttcctgggccagcgcggggccagcagcaagcagcct
gccttcatgggaccacggctgcctcctcacatgatcaagagttcaagtcgtttaaatgga
aatggacccttaaaagaggatcccagtactgttggtgttgctgtgaaaaggccgtcttca
gctccaccaacagcttgtgttcagaactgggccatttccaggccttcaatggcagaccct
tccaaagcccagaagatcaccatcagtattcacaacaagctgcccccccggcaggcggtg
ccgcaggccgagtgtcccagcagcgctgtggaggaggaggatctgaagccccttccttca
gccacaattacaaactcttcagcagcagagcctacctcaaacctctccacagtgtcagtt
gctactaatgtctccaagcaggaggttcctgatgaaatctttgtggagccagcagtgaat
ggaaaccctaagctgtgttctgataacgtggtcccttacggcgcagagccttcaggaaaa
tgcgaggagtcaaagggcttgttcaaaaggcattgcaacgtcatctcttccaatgggatt
ctgattgggaaggtggtccgtacattgcataattcccattcatcctgtcagaatgctgaa
gaaagatcccagcatgagctgccaaaaattgattccctaaatggtgctattagtttagat
aatgaatataaagaaaatggactgaaacttgatgattccacttgccaagtccaacccgtt
aaaccttcggagatcttcttctctaaagcaaatggagtgcttgaagcgatgcctaaagct
ttgtcaccagatcctcaaggtatcttagaatctcttacgtacagccagttgaacagcttg
tcagaggaaaagagtgtctctggacctcagaagtcttctgacaaagatggagttacggat
actgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttccttccaacttt
agctgtgaggttgagaaactttttactcaatcagattctgaaacgatttttaccaaagaa
gaagttgctgaaagtattataacaaaagctgataatgcacatctcaatatcaatggtcag
cacaaggttaggaaaaaatccttggatactgaaggtgaattccttgggcagtgtgagtct
gaagacatcagagataaagacaaactaagaagatcaaaagaacctgaactcatttcaaaa
gaaaatcctttgtacatcaaaggatctcctgagagcaaagagaaattagggcaaatttcc
tctataaagcctgacattgaatgtagttctaaaaaacttgcatctctagatattacagac
aaatgccaagatacaaaggacatttctaataactatgtagcggtaccacctgttaatgac
tcttctattacaaagctggataaagtattggaaagtcaattttctagagcagatgaagga
ctgagtaataaaacatgtgaagatgatgataaacatatgaaaaaaaataagaaaaaaatc
catgactctaaaagaactgacaaagagcactaccggaggaagagagaaagctcggacact
gaggagaaggagagacaaaccagaaacaaaccagatgatcattcccacaggaggaggagc
tctcacagcatggaaacaaacaagcaaagccgtcacaagcaggagtattgcagtgagagc
aagtacagatcctcccacaatgaaaggaacagtcccagtaatggcaggagctcaggaaaa
tattctcgctacagatcccgaagcagagaaaggacagatccagacaggaataggtattat
tattccaaaggagacagaccttggattagagacagatactatcaagatgaaccacggaga
tgggacaaatgcaggtactacagtgattattattcctcccatggaacaagggatggtagg
gagaggaggtcttctcattgtgataaagactatgacaaattgagccaagcttacagcagg
tcacacaaggattatcactgcaaaagcagatgggctcacagcacactctcccgagaggag
gatatgcatcacttcagcagccacagagcaaacttccaccattgttcagtacctcagcag
cactcggaaaaatacccccgtgagaggcacgcgcttcctccaggctcagctcactccagt
tttgaggactcttcccgggaaaacgaaaaagaaaaactaagaaatggcaaaagaaaatac
tcccaccaagaagaaagtggaagtgacatagaaaagaaatgccgaaagacagacgaccaa
agaatcaaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagag
aaggattacaaactttatgatttggattgctctgtgctccactttgacaatgacaatcgc
aaacataagaaaaagaagaaaaagaagaagcacgacaggaacctgaaagacttattggaa
tatttagatcctcgtttccagaagaaaacatgggagaagaaggaagaatcccgtcctcca
gatgaccatttatgtgagcaatacagaaaccagggcagtaaacaaccctacaaggaagag
aagccttctggtgcaggtgacagcaagaaatacagctccatggcagccactgagtatgtc
agagatgtggagctgactgatgaaagccttcaatactcagactga
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