Molothrus ater (brown-headed cowbird): 118692488
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Entry
118692488 CDS
T11569
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04020
Calcium signaling pathway
mate04080
Neuroactive ligand-receptor interaction
mate04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118692488 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118692488 (GRIN2A)
04082 Neuroactive ligand signaling
118692488 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mate04040
]
118692488 (GRIN2A)
Ion channels [BR:
mate04040
]
Ligand-gated channels
Glutamate (ionotropic)
118692488 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
118692488
NCBI-ProteinID:
XP_036248246
LinkDB
All DBs
Position
16:10439638..10596636
Genome browser
AA seq
1458 aa
AA seq
DB search
MRKIGCALLVLQALLAPLDLVRGAEKNYPILNIAVILGRTKYITERDIRALWTREMSADL
TVDINVVTLLVNQTDPKSIITHVCDLMSGTKIHGVVFGDDTDQEAVAQILDFISSQTSIP
ILGIHGGASMIMADKDVMSTFFQFGASIQQEAIIMLKIMQDYDWHVFSLVTTTFPGYRDF
INVIKTTVENSFVGWDMQNVIILDTAFGDAKTQIQLKKIHSSVILLYCSKDEAVYILDEA
RSLGLTGYDFFWIVPSLVSGNTEITPKEFPSGLISAAYDEWDYSLEARVRDGLGVIATAA
SAMLEKYSFLPEARTSCYGQLDKNDRPSQTLHKFMMNVTWEGRDLSFTADGYQAHPRLVV
IVLNNEREWEKVGKWENNSLSLKYSVWPRYSSFADSDPDDNHLSIVTLEEAPFVIVEDVD
PLMESCQKNTVPCRKFVKLNNKTNEGTNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNG
KHGKKVNNVWNGMIGEVVYHRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT
VSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAQGRDPHGPSFTIGK
AVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVT
GLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPDMHLYMTKFNQKGVEDALVSLKTG
KLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFV
GDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLFYW
KLRFCFTGVCSDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFSLTNSQTNMLKLLRTAKN
MTNINPSRIDSPKRTADFIQRGSLIMDMVMDKGNLVFSDNRSFQTKDNFFGDNISELQTL
PGNRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVTTEAKVNSRPRQLWMKSVESLRQDSV
RQGQGSQRENGSEENRQLSLKSQRFLPEEIVHSDVSETSSRATCHMEAENNNKHHKTKDN
FKKRTVASKYPKDTSDVELTYLKTKQGSPRDKIYTIDADKEPGFRLDTPQYIENIVLPEP
VELPEVYQDHNDNYRKAEHANRTPSHNEDSLPNNDQYKLFGKHYTLKEKNTSLGDMNDRF
RQNSTHCRSCLSNMPTYAGHYSTRSPYKCDACLRMGNLYDIEEDQMLQDTTNLSLPEEIY
ERTWSQSSALQYHKKNKLRISRQHSFDNIADKSREIDIGRPSRSISLKEREKFLQSSPYA
SMFSVPSSKLLSNKASLLTHALEDSKRSKSLYAVHSDDNPFLHSYRDDQHLSLRRSPADL
YKHSLPTRGRNDNYLRSSIQSTASYSSRDGRIHNDMYISEHVLPYVANRNSLYSTPRVLN
SCSNTRVYKKRPSIESDV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaattggctgtgctctcctggtactccaagctcttctggcacctttggatctt
gttcgtggagcagagaaaaattatcccatcctgaacattgcagtgattctgggaaggacc
aagtacataacagagagagatatcagagctctctggaccagggaaatgtcagcagacctg
actgttgatatcaatgtcgtgactcttcttgtgaaccagactgaccctaagagcatcata
acacatgtttgtgacttgatgtcaggcaccaagatccatggagtggtttttggagatgac
actgatcaggaggcagtagctcagattttggattttatttcatctcagacttctattcca
attcttggaattcatggcggggcctccatgataatggcagataaggatgtcatgtccacg
ttcttccagtttggagcttccatccagcaagaagccattatcatgctgaagatcatgcag
gattatgactggcatgtgttctctctggtgaccaccactttccctggatatcgagatttc
atcaatgtcattaagaccactgtggaaaacagttttgtgggctgggacatgcagaacgtc
atcatactcgatactgcctttggagatgccaaaacccaaatccagctgaagaaaatccat
tcatctgtcatcctgctgtattgttccaaggatgaagctgtctacatcctggatgaggct
cgctccctgggccttactggctatgatttcttttggatagttcccagcctggttagtggt
aacacagaaatcactcccaaggagtttccttcaggactcatttcagcagcttatgatgag
tgggactacagtttagaagctcgggtgcgggatggccttggggtcattgccactgctgcc
tcagccatgctggaaaagtactccttccttcctgaggcacgaacgagctgctatggacaa
ctggacaaaaacgaccggccctctcaaaccttgcacaagttcatgatgaatgtgacatgg
gaaggcagagatttgtccttcacagcagatgggtaccaggcccaccccaggctggtggtg
atcgtgctgaacaacgagcgggagtgggagaaggtggggaagtgggagaacaactccctg
agcctcaagtactcggtgtggccgaggtacagctccttcgcagacagcgaccccgatgac
aaccacctgagcattgtcaccctggaggaggctccctttgttatcgtggaggatgtggat
cctctcatggagagctgccaaaaaaacaccgtgccatgccggaaatttgtcaaacttaac
aacaaaactaatgagggaacgaacgtaaagaagtgctgcaaaggattctgcatcgatatc
ttgaagaagttgtctaaaactgtcaagttcacatatgacctgtacttggtgacgaatggg
aagcacggcaaaaaggtcaataacgtgtggaacggaatgatcggtgaagtggtgtaccac
cgggcagtgatggctgtgggctcactcaccatcaacgaggagcgctcggaagtcgttgac
ttttcggtgccgttcgtggagacggggatcagtgtcatggtgtcacggagcaacggcacg
gtgtcaccatctgctttcctagagccttttagtgcttctgtctgggtgatgatgtttgtg
atgcttctcatcgtgtctgccatggctgtctttatatttgagtactttagtcctgtagga
tacaacaggaacttagcacaagggagagatccccatgggccatccttcaccattggaaag
gcagtgtggttactgtggggcttggtcttcaacaactctgtgcctgtgcagaaccccaag
gggaccacgagcaagatcatggtgtcagtctgggctttctttgctgtcatcttcctggcc
agctacactgccaacttagctgcctttatgattcaagaggaatttgttgaccaagtgact
gggctgagtgataaaaagtttcaaaggcctcatgattattcacctccttttcggtttggg
acggtcccaaatggaagcactgagaggaatatccggaacaactaccctgacatgcacctc
tacatgaccaagtttaaccagaaaggagttgaggatgccttggtcagcttgaaaactggg
aagttggatgctttcatctatgatgcagcagtgctgaattacaaggctggaagagatgaa
ggctgcaaacttgtcacaataggcagtgggtacatctttgccactactggctatgggatt
gctctccagaaaggatcaccttggaagagacaaattgatctcgccctccttcagtttgtg
ggagatggggaaatggaagagttagaaaccctgtggctgactggtatttgtcacaacgag
aagaacgaagtcatgagcagccagctggacatcgacaacatggcaggagtgttttacatg
ctcgcagcagccatggcactcagcttaataacctttgtctgggagcacttattttactgg
aaactcagattctgcttcactggagtctgctcagataggccaggattgctgttctcaatc
agcaggggtatttacagttgcattcatggagtacacattgaagagaagaagaagtctcct
gacttttctttgaccaattcacaaaccaacatgttaaaactgctgcgaacagcgaaaaac
atgaccaatatcaacccttcaagaattgactcccccaaaagaacagctgattttattcag
aggggttctttgattatggacatggtcatggataagggaaacttggtattttctgataac
agatcctttcagacaaaggacaacttttttggtgacaacataagtgaactgcagacactt
cctggcaatcgacacaaggacaatctgaacaattatgttttccaagggcagcatcctctc
acactgaatgaatccaatccaaatacagtagaggttgcagtaacaacagaagcaaaagtg
aactcccggcccaggcagctttggatgaaatctgttgaatctttacgccaagattctgta
cgtcagggccaaggttcccagagagaaaatgggtctgaggaaaacaggcagctttcactg
aaaagccaaagattccttcctgaagagattgtccattcagatgtctcagagacatcaagc
agagctacttgccacatggaagctgaaaacaacaacaagcaccacaaaaccaaggacaat
tttaaaaaaaggacagtagcatcaaaatacccaaaagacactagtgatgtggaactgaca
tatctgaaaaccaaacagggctctccacgggataaaatctacacgattgatgctgacaag
gagccaggattccgcttggacacacctcagtacattgaaaacattgtccttccagaacct
gtagagcttcccgaggtttaccaagatcacaacgacaactacaggaaagccgaacacgcc
aacaggactccatcacataatgaagacagtcttccaaataatgaccagtataaactcttt
ggaaagcactacactctcaaagaaaaaaatacttccctaggtgacatgaacgataggttc
aggcagaattccacacactgcaggagctgtctctccaacatgcccacctacgcggggcac
tactcgaccagatctccctataaatgtgacgcatgcttgcggatggggaacctctatgac
attgaggaagatcagatgctgcaggatacaacgaacttatcacttcctgaagaaatatat
gagcgtacttggtcacaaagtagtgctctgcaatatcataaaaagaataaactgaggatt
agcaggcaacactcttttgataatatcgctgataaatccagggaaattgatattggaaga
ccttctcgcagtataagcttgaaagaaagagagaaatttcttcaaagtagtccatatgca
agcatgtttagtgttccctcaagcaaactgttgagcaacaaggcctcacttttaacccat
gctctggaggacagtaagaggagcaagtccctgtacgctgttcactcggatgataacccc
ttcctgcactcctatcgtgatgaccagcatttatctcttaggcgaagtccagctgatctt
tataaacattcattgccaacaagaggaagaaatgataattatttaaggtcatccatacag
tctacagcatcatactcttccagggatggtcggatccataatgacatgtacatttcagag
catgttttgccttacgttgcaaataggaatagcttgtactcaactccaagggttttaaat
tcctgtagcaatacacgtgtgtataagaaaaggcctagcattgaatcagatgtttaa
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integrated database retrieval system
