Molothrus ater (brown-headed cowbird): 118692493
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Entry
118692493 CDS
T11569
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118692493 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mate03019
]
118692493 (DIS3)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
118692493 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_S1
Rrp44_CSD1
CSD2
OB_HELZ2
Toxin_R_bind_C
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
118692493
NCBI-ProteinID:
XP_036248292
LinkDB
All DBs
Position
2:51120722..51140356
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AA seq
966 aa
AA seq
DB search
MLTSRTFVKRTRAGAVVKVVREHYLRDDIACGAAACRLCLPAAPAPGTGSAPGLEARPSG
PASSLCPGPHFLLPDTNLLLHQIDILEDPVIKNVIVLQTVLQEVRNRSAPVYKRIRDVIQ
NKEKHFYSFTNEHHRETYIEQNRGETANDRNDRAIRVAVKWYNEHLKKIEDEEKIQVILL
TNDRINKEKALEEGITAYTCEEYIKSLTANPELVDRLACVSDEGKEIEGGKIIFPEHIPL
SKLQQGIKSGIYLQGTYRANRENYLEATVWVHGDAEENKEIIVQGLKHLNRAIHEDVVAV
EVLAKDEWVAPSSVVLQDDNQNEENIENEEEKENILKTSVNKDMLRPTGRVVGIIKRNWR
PYCGMLSKSQIKEARRHLFTPADRRIPRIRIETRQADTLEGQRIIVAIDGWPRNSRYPNG
HFVKNLGSAGDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEEDMKHREDLRHLN
VCSVDPPGCTDIDDALHCREIGNGNLEVGVHIADVSHFIRPGNALDEESVKRGTTVYLCE
KRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSVINSKASLTYAEAQ
MRIDSATMNDDITTSLRGLNKLAKILKKKRIDKGALTLASPEVRFHMDSETHDPIDLQTK
ELKETNSMVEEFMLLANISVAQKIYDEFPEFALLRKHPAPPPSNYDILVKAAKSKNLEIK
TDSAKALAESLDKAESPTFPYLNTLLRILTTRCMMQAVYFCSGMDNDFHHYGLASPIYTH
FTSPIRRYADIIVHRLLAVAIGADSTYPELTDKHKLADMCKNLNYRHKMAQYAQRASVAF
HTQLFFKTKGVVNEDAYILFVRKNAVVVLIPKYGLEGTVFFEEKDKPTPKLEYNSEVPSL
TVEDTTLHVFDKVKVNIMLDDSNIQHQKMRMVLVEPKILGNDTCASLSAEASSKDEPEKK
KKKLQK
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcgcggacgttcgtgaagcgcacgcgggcgggcgcggtggtgaaggtggtg
cgcgagcattacctgcgcgacgacatcgcgtgcggcgccgccgcgtgccgcctctgcctc
cccgccgcgcccgcgcccggcaccgggagcgcgcccgggctggaggcgcggcccagcggc
cccgccagcagcctctgccccgggccgcacttcctcctgcccgacaccaacctgctcctg
caccagattgatatccttgaagatcctgttattaagaatgtcattgtgctgcagacagtc
ctacaagaagtcaggaatcggagtgcgccagtgtacaagcgaattagggacgtgattcaa
aacaaagaaaaacatttctattctttcaccaatgagcatcacagagaaacgtacatagag
cagaatcggggagaaactgctaatgaccgcaatgacagagccattcgggtagcagtgaaa
tggtacaatgaacacttgaagaaaatagaggatgaggaaaagattcaagttatcttgtta
acaaatgacagaattaataaagagaaagctctggaggaaggaataactgcttatacatgt
gaggagtatataaaaagcttgacagctaatcctgagctcgtagatcgtcttgcttgtgta
tctgatgaagggaaggaaatagaaggtggaaaaataatattcccagaacatattcctctt
agcaaactgcagcaaggaataaaatctggtatttacctccaaggaacttacagggcaaac
agagagaattatcttgaagctactgtttgggttcatggagatgctgaagaaaacaaagag
ataattgtacagggcctgaaacatttaaaccgagcaattcatgaagatgttgtagctgtg
gaggtgttggcaaaagatgaatgggtggcaccatcctcagtggttctgcaggacgacaac
cagaatgaagagaacattgaaaatgaagaggagaaagaaaacattctgaagacatccgtt
aacaaggacatgctgaggcctacgggaagagtagtgggcattataaaacgaaactggcgg
ccgtattgtgggatgctttccaagtcacagatcaaagaggcaaggcgccatttgtttaca
ccagctgatcgcagaattccacgcattcgaatagaaaccagacaggcagatacgttggaa
gggcaaagaataattgttgctattgatggttggcccaggaattccaggtatcctaatggt
cattttgtaaagaatttgggaagtgctggagataaagagacagagacagaagttcttctg
cttgaacatgatgtccctcaccaggctttttcccaggctgtccttagtttcctaccaaaa
atgccatggagcattacagaagaggatatgaaacacagggaggacttaaggcatctgaat
gtttgtagtgttgatcctcctggttgtacagatattgatgatgcattacattgtagagaa
ataggaaatggaaatctagaggtcggtgtacatattgcagatgtcagtcattttattcgg
ccaggaaatgctttggatgaggagtcagtcaaaagaggaacaacagtgtatctgtgtgaa
aaaagaattgatatggttccagagctacttagttccaacttgtgctctctgagatctaat
gtggacaggcttgcattttcatgcatatgggaaatgaaccataaggctgaaattctaaaa
accagatttacaaagagtgttattaattccaaggcttctcttacatatgctgaagcacag
atgagaatcgattcagcaactatgaatgatgatattactaccagcttacgtggactaaac
aaattagcaaaaatcctgaagaagaaaagaattgataaaggagccttgacacttgcatca
ccagaagttcgtttccacatggacagtgaaactcatgatcctattgatctgcagactaag
gagcttaaagagacaaattccatggttgaagagttcatgttgcttgccaatatttctgta
gcacaaaaaatttatgatgagttcccagagtttgccctgctccggaaacatcctgctcct
cccccatcaaattacgacatccttgtaaaggctgcgaagtccaagaatttggaaattaag
acagattcagcaaaagctttagctgaatcattagacaaagctgaatctcctacgttcccc
tacctaaatacactgctgcgaattttgaccactcgctgcatgatgcaagctgtttatttc
tgctcaggaatggataatgattttcatcactatggtttagcctcacctatttatactcac
tttacctcacctattagaaggtatgctgatatcatagtgcatcggcttttggcagtggcc
ataggagcagacagtacttacccagaactcacagataaacacaaactggcagatatgtgt
aaaaatctcaattaccgacataaaatggcacaatatgcacaaagagcctctgtggcattc
catacacagctgttcttcaaaaccaagggagtagtaaatgaagatgcatatatattattt
gtaagaaaaaatgcagttgtggttctgattcccaagtatgggttagaaggaacagtcttc
tttgaagaaaaagataaaccaacaccaaaactggagtacaacagtgaggtgccatcactt
accgtggaagacacaacattacatgtatttgataaagttaaagtgaacatcatgttagat
gattccaacatccaacatcagaaaatgcggatggtcttggtagaacccaagatattagga
aatgatacatgtgcaagtctctctgcagaggcaagcagcaaggacgaaccagagaaaaag
aaaaagaaactacaaaaatag
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