Molothrus ater (brown-headed cowbird): 118692529
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Entry
118692529 CDS
T11569
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03015
mRNA surveillance pathway
mate05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118692529 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118692529 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mate03021
]
118692529 (CPSF4)
03019 Messenger RNA biogenesis [BR:
mate03019
]
118692529 (CPSF4)
Transcription machinery [BR:
mate03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118692529 (CPSF4)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118692529 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-CCHC_3
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
118692529
NCBI-ProteinID:
XP_036248310
LinkDB
All DBs
Position
16:complement(3079239..3085992)
Genome browser
AA seq
243 aa
AA seq
DB search
MQELIASVDHITFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMHPRFELPMGTTEQPP
LPQPTQTQQKRTPQVIGVMQSQNNNSGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFL
SGQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagctcatcgccagcgtggatcacatcacgttcgacctggagctggccgtggag
cagcagctgggggcacagccgctccccttccctggcatggacaaatcgggcgcagctgtc
tgtgagttttttttaaaggcggcatgtggaaaaggaggcatgtgcccattcagacacatc
agtggggaaaagacagttgtttgtaaacactggctacgaggactgtgcaaaaagggagac
cagtgcgagttcctgcacgagtatgacatgaccaagatgcctgagtgttatttctactcc
aaatttggggaatgcagtaacaaggaatgtccattcttgcacattgacccggagtcaaag
atcaaagactgtccctggtatgacagaggcttctgcaaacacggtcccctgtgcagacat
cggcacactcggagagtcatttgtgtgaattacctggtaggattctgtccagagggccct
gcctgtaaattcatgcaccctcggtttgaactgccaatgggaaccacagagcaaccacca
ctgcctcagccaacacaaacacagcaaaagaggacaccccaagtcattggagtcatgcaa
tctcaaaataacaacagtgggaacagaggaccccggccgttggagcaggtcacctgctac
aagtgtggtgaaaaaggtcattatgccaacagatgcaccaaaggacacctggcctttctc
agtggacagtga
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integrated database retrieval system
